RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 ATP2A2P16615 1042 aaKnown RBP11.02□□□□□ -0.64
NIF3L1-202ENST00000409020 HOXC8P31273 242 aa11.02□□□□□ -0.64
NIF3L1-202ENST00000409020 MTMR1Q13613 665 aa11.02□□□□□ -0.64
NIF3L1-202ENST00000409020 TOB2Q14106 344 aaPredicted RBP11.02□□□□□ -0.64
NIF3L1-202ENST00000409020 ADGRE1Q14246 886 aa11.02□□□□□ -0.64
NIF3L1-202ENST00000409020 PKN1Q16512 942 aa11.02□□□□□ -0.64
NIF3L1-202ENST00000409020 XRRA1Q6P2D8 792 aa11.02□□□□□ -0.64
NIF3L1-202ENST00000409020 SERINC5Q86VE9 423 aa11.02□□□□□ -0.64
NIF3L1-202ENST00000409020 MAFAQ8NHW3 353 aaPredicted RBP11.02□□□□□ -0.64
NIF3L1-202ENST00000409020 CAGE1Q8TC20 777 aa11.02□□□□□ -0.64
NIF3L1-202ENST00000409020 ZBTB10Q96DT7 871 aa11.02□□□□□ -0.64
NIF3L1-202ENST00000409020 AGXT2Q9BYV1 514 aa11.02□□□□□ -0.64
NIF3L1-202ENST00000409020 SETD4Q9NVD3 440 aa11.02□□□□□ -0.64
NIF3L1-202ENST00000409020 NID2Q14112 1375 aa11.02□□□□□ -0.65
NIF3L1-202ENST00000409020 TMEM265A0A087WTH1 108 aa11.01□□□□□ -0.65
NIF3L1-202ENST00000409020 GSTTP1A0A1W2PQM5 241 aa11.01□□□□□ -0.65
NIF3L1-202ENST00000409020 CCDC66A2RUB6 948 aa11.01□□□□□ -0.65
NIF3L1-202ENST00000409020 C17orf102A2RUQ5 167 aa11.01□□□□□ -0.65
NIF3L1-202ENST00000409020 PFKMP08237 780 aa11.01□□□□□ -0.65
NIF3L1-202ENST00000409020 ARP10275 920 aa11.01□□□□□ -0.65
NIF3L1-202ENST00000409020 MARK3P27448 753 aa11.01□□□□□ -0.65
NIF3L1-202ENST00000409020 RFC2P35250 354 aa11.01□□□□□ -0.65
NIF3L1-202ENST00000409020 TCF7P36402 384 aaPredicted RBP11.01□□□□□ -0.65
NIF3L1-202ENST00000409020 THPOP40225 353 aa11.01□□□□□ -0.65
NIF3L1-202ENST00000409020 CLK2P49760 499 aaKnown RBP11.01□□□□□ -0.65
NIF3L1-202ENST00000409020 ADCY7P51828 1080 aa11.01□□□□□ -0.65
NIF3L1-202ENST00000409020 CCT2P78371 535 aaKnown RBP11.01□□□□□ -0.65
NIF3L1-202ENST00000409020 DEFB103AP81534 67 aa11.01□□□□□ -0.65
NIF3L1-202ENST00000409020 RBL2Q08999 1139 aa11.01□□□□□ -0.65
NIF3L1-202ENST00000409020 PTK7Q13308 1070 aa11.01□□□□□ -0.65
NIF3L1-202ENST00000409020 NTRK3Q16288 839 aa11.01□□□□□ -0.65
NIF3L1-202ENST00000409020 PFKFB3Q16875 520 aaPredicted RBP11.01□□□□□ -0.65
NIF3L1-202ENST00000409020 PPP1R18Q6NYC8 613 aa11.01□□□□□ -0.65
NIF3L1-202ENST00000409020 NLRX1Q86UT6 975 aa11.01□□□□□ -0.65
NIF3L1-202ENST00000409020 GPRASP2Q96D09 838 aa11.01□□□□□ -0.65
NIF3L1-202ENST00000409020 SENP7Q9BQF6 1050 aa11.01□□□□□ -0.65
NIF3L1-202ENST00000409020 USP26Q9BXU7 913 aa11.01□□□□□ -0.65
NIF3L1-202ENST00000409020 ANO3Q9BYT9 981 aa11.01□□□□□ -0.65
NIF3L1-202ENST00000409020 UPF3BQ9BZI7 483 aaKnown RBP11.01□□□□□ -0.65
NIF3L1-202ENST00000409020 JADE2Q9NQC1 790 aa11.01□□□□□ -0.65
NIF3L1-202ENST00000409020 SH3BP1Q9Y3L3 701 aa11.01□□□□□ -0.65
NIF3L1-202ENST00000409020 REC8O95072 547 aa11.01□□□□□ -0.65
NIF3L1-202ENST00000409020 CXCL10P02778 98 aa11.01□□□□□ -0.65
NIF3L1-202ENST00000409020 CA3P07451 260 aa11.01□□□□□ -0.65
NIF3L1-202ENST00000409020 CTSHP09668 335 aa11.01□□□□□ -0.65
NIF3L1-202ENST00000409020 FXR2P51116 673 aaKnown RBP eCLIP11.01□□□□□ -0.65
NIF3L1-202ENST00000409020 WDR5P61964 334 aaKnown RBP11.01□□□□□ -0.65
NIF3L1-202ENST00000409020 SATB1Q01826 763 aa11.01□□□□□ -0.65
NIF3L1-202ENST00000409020 ITGB3BPQ13352 177 aaPredicted RBP11.01□□□□□ -0.65
NIF3L1-202ENST00000409020 JAKMIP3Q5VZ66 844 aa11.01□□□□□ -0.65
NIF3L1-202ENST00000409020 FBXL16Q8N461 479 aa11.01□□□□□ -0.65
NIF3L1-202ENST00000409020 BANK1Q8NDB2 785 aa11.01□□□□□ -0.65
NIF3L1-202ENST00000409020 RASGRP4Q8TDF6 673 aa11.01□□□□□ -0.65
NIF3L1-202ENST00000409020 LMBR1Q8WVP7 490 aa11.01□□□□□ -0.65
NIF3L1-202ENST00000409020 ATP6V0A1Q93050 837 aa11.01□□□□□ -0.65
NIF3L1-202ENST00000409020 PCYT2Q99447 389 aa11.01□□□□□ -0.65
NIF3L1-202ENST00000409020 MTIF3Q9H2K0 278 aaKnown RBP11.01□□□□□ -0.65
NIF3L1-202ENST00000409020 CERS4Q9HA82 394 aa11.01□□□□□ -0.65
NIF3L1-202ENST00000409020 PRDM16Q9HAZ2 1276 aa11.01□□□□□ -0.65
NIF3L1-202ENST00000409020 ZSWIM6Q9HCJ5 1215 aa11.01□□□□□ -0.65
NIF3L1-202ENST00000409020 KCNH7Q9NS40 1196 aa11.01□□□□□ -0.65
NIF3L1-202ENST00000409020 MSRAQ9UJ68 235 aa11.01□□□□□ -0.65
NIF3L1-202ENST00000409020 PTPRSQ13332 1948 aa11.01□□□□□ -0.65
NIF3L1-202ENST00000409020 LCHNA4D1U4 455 aa11□□□□□ -0.65
NIF3L1-202ENST00000409020 EPOPA6NHQ4 379 aa11□□□□□ -0.65
NIF3L1-202ENST00000409020 RFXAPO00287 272 aa11□□□□□ -0.65
NIF3L1-202ENST00000409020 SCG2P13521 617 aa11□□□□□ -0.65
NIF3L1-202ENST00000409020 PDIA3P30101 505 aaKnown RBP11□□□□□ -0.65
NIF3L1-202ENST00000409020 RCAN1P53805 252 aa11□□□□□ -0.65
NIF3L1-202ENST00000409020 RAB30Q15771 203 aa11□□□□□ -0.65
NIF3L1-202ENST00000409020 PPP2R2DQ66LE6 453 aa11□□□□□ -0.65
NIF3L1-202ENST00000409020 RUFY4Q6ZNE9 571 aa11□□□□□ -0.65
NIF3L1-202ENST00000409020 RUFY3Q7L099 469 aa11□□□□□ -0.65
NIF3L1-202ENST00000409020 CCDC155Q8N6L0 562 aa11□□□□□ -0.65
NIF3L1-202ENST00000409020 MXRA8Q9BRK3 442 aa11□□□□□ -0.65
NIF3L1-202ENST00000409020 PRDM6Q9NQX0 595 aa11□□□□□ -0.65
NIF3L1-202ENST00000409020 CGNQ9P2M7 1197 aaKnown RBP11□□□□□ -0.65
NIF3L1-202ENST00000409020 FAM86B1E9PN63 330 aa10.99□□□□□ -0.65
NIF3L1-202ENST00000409020 FAM86B2P0C5J1 330 aa10.99□□□□□ -0.65
NIF3L1-202ENST00000409020 ADAM17P78536 824 aa10.99□□□□□ -0.65
NIF3L1-202ENST00000409020 ARHGAP4P98171 946 aa10.99□□□□□ -0.65
NIF3L1-202ENST00000409020 CEP55Q53EZ4 464 aa10.99□□□□□ -0.65
NIF3L1-202ENST00000409020 HERC6Q8IVU3 1022 aa10.99□□□□□ -0.65
NIF3L1-202ENST00000409020 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.99□□□□□ -0.65
NIF3L1-202ENST00000409020 PPM1EQ8WY54 764 aa10.99□□□□□ -0.65
NIF3L1-202ENST00000409020 SLC26A6Q9BXS9 759 aa10.99□□□□□ -0.65
NIF3L1-202ENST00000409020 SLC28A3Q9HAS3 691 aa10.99□□□□□ -0.65
NIF3L1-202ENST00000409020 AGO4Q9HCK5 861 aaKnown RBP10.99□□□□□ -0.65
NIF3L1-202ENST00000409020 VPS54Q9P1Q0 977 aa10.99□□□□□ -0.65
NIF3L1-202ENST00000409020 PCDHA11Q9Y5I1 949 aa10.99□□□□□ -0.65
NIF3L1-202ENST00000409020 RSPH10B2B2RC85 870 aa10.98□□□□□ -0.65
NIF3L1-202ENST00000409020 TULP2O00295 520 aa10.98□□□□□ -0.65
NIF3L1-202ENST00000409020 PRPF3O43395 683 aaKnown RBP10.98□□□□□ -0.65
NIF3L1-202ENST00000409020 EDIL3O43854 480 aa10.98□□□□□ -0.65
NIF3L1-202ENST00000409020 CCNE2O96020 404 aa10.98□□□□□ -0.65
NIF3L1-202ENST00000409020 RSPH10BP0C881 870 aa10.98□□□□□ -0.65
NIF3L1-202ENST00000409020 ACTN1P12814 892 aa10.98□□□□□ -0.65
NIF3L1-202ENST00000409020 SREBF1P36956 1147 aa10.98□□□□□ -0.65
NIF3L1-202ENST00000409020 EVCP57679 992 aa10.98□□□□□ -0.65
NIF3L1-202ENST00000409020 MARCH8Q5T0T0 291 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms