RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 CASP5P51878 434 aa27.27■■□□□ 1.96
DNMT3A-206ENST00000406659 GNG11P61952 73 aa27.27■■□□□ 1.96
DNMT3A-206ENST00000406659 MRPS9P82933 396 aaKnown RBP27.27■■□□□ 1.96
DNMT3A-206ENST00000406659 ZBED6P86452 979 aa27.27■■□□□ 1.96
DNMT3A-206ENST00000406659 COG2Q14746 738 aa27.27■■□□□ 1.96
DNMT3A-206ENST00000406659 EDRF1Q3B7T1 1238 aa27.27■■□□□ 1.96
DNMT3A-206ENST00000406659 C1orf186Q6ZWK4 172 aa27.27■■□□□ 1.96
DNMT3A-206ENST00000406659 EPM2AIP1Q7L775 607 aaPredicted RBP27.27■■□□□ 1.96
DNMT3A-206ENST00000406659 RMDN3Q96TC7 470 aa27.27■■□□□ 1.96
DNMT3A-206ENST00000406659 RBBP6Q7Z6E9 1792 aaKnown RBP27.26■■□□□ 1.96
DNMT3A-206ENST00000406659 RBM10P98175 930 aaKnown RBP27.26■■□□□ 1.95
DNMT3A-206ENST00000406659 MTMR1Q13613 665 aa27.26■■□□□ 1.95
DNMT3A-206ENST00000406659 PRKG1Q13976 671 aa27.26■■□□□ 1.95
DNMT3A-206ENST00000406659 PGM5Q15124 567 aa27.26■■□□□ 1.95
DNMT3A-206ENST00000406659 KNOP1Q1ED39 458 aaKnown RBP27.26■■□□□ 1.95
DNMT3A-206ENST00000406659 LXNQ9BS40 222 aa27.26■■□□□ 1.95
DNMT3A-206ENST00000406659 ZBTB39O15060 712 aa27.25■■□□□ 1.95
DNMT3A-206ENST00000406659 CETN3O15182 167 aa27.25■■□□□ 1.95
DNMT3A-206ENST00000406659 MYCLP12524 364 aaPredicted RBP27.25■■□□□ 1.95
DNMT3A-206ENST00000406659 OAZ1P54368 228 aa27.25■■□□□ 1.95
DNMT3A-206ENST00000406659 ADAM9Q13443 819 aa27.25■■□□□ 1.95
DNMT3A-206ENST00000406659 ARHGEF16Q5VV41 709 aa27.25■■□□□ 1.95
DNMT3A-206ENST00000406659 CHP1Q99653 195 aa27.25■■□□□ 1.95
DNMT3A-206ENST00000406659 PXMP2Q9NR77 195 aa27.25■■□□□ 1.95
DNMT3A-206ENST00000406659 AGPAT5Q9NUQ2 364 aa27.25■■□□□ 1.95
DNMT3A-206ENST00000406659 SIK3Q9Y2K2 1263 aa27.25■■□□□ 1.95
DNMT3A-206ENST00000406659 PARP14Q460N5 1801 aa27.25■■□□□ 1.95
DNMT3A-206ENST00000406659 SSC5DA1L4H1 1573 aa27.25■■□□□ 1.95
DNMT3A-206ENST00000406659 DDNO94850 711 aaPredicted RBP27.25■■□□□ 1.95
DNMT3A-206ENST00000406659 MYBP10242 640 aa27.25■■□□□ 1.95
DNMT3A-206ENST00000406659 CASQ1P31415 396 aa27.25■■□□□ 1.95
DNMT3A-206ENST00000406659 SNRNP48Q6IEG0 339 aaKnown RBP27.25■■□□□ 1.95
DNMT3A-206ENST00000406659 ZC3H3Q8IXZ2 948 aaKnown RBP27.25■■□□□ 1.95
DNMT3A-206ENST00000406659 BANK1Q8NDB2 785 aa27.25■■□□□ 1.95
DNMT3A-206ENST00000406659 REPS2Q8NFH8 660 aa27.25■■□□□ 1.95
DNMT3A-206ENST00000406659 FHDC1Q9C0D6 1143 aaPredicted RBP27.25■■□□□ 1.95
DNMT3A-206ENST00000406659 RIPK3Q9Y572 518 aa27.25■■□□□ 1.95
DNMT3A-206ENST00000406659 DHX15O43143 795 aaKnown RBP27.24■■□□□ 1.95
DNMT3A-206ENST00000406659 CALUO43852 315 aaPredicted RBP27.24■■□□□ 1.95
DNMT3A-206ENST00000406659 PRPF6O94906 941 aaKnown RBP27.24■■□□□ 1.95
DNMT3A-206ENST00000406659 BAATQ14032 418 aaPredicted RBP27.24■■□□□ 1.95
DNMT3A-206ENST00000406659 CATSPERGQ6ZRH7 1159 aa27.24■■□□□ 1.95
DNMT3A-206ENST00000406659 MYCT1Q8N699 235 aa27.24■■□□□ 1.95
DNMT3A-206ENST00000406659 ACRBPQ8NEB7 543 aa27.24■■□□□ 1.95
DNMT3A-206ENST00000406659 PDCD2LQ9BRP1 358 aa27.24■■□□□ 1.95
DNMT3A-206ENST00000406659 MMRN2Q9H8L6 949 aa27.24■■□□□ 1.95
DNMT3A-206ENST00000406659 L2HGDHQ9H9P8 463 aa27.24■■□□□ 1.95
DNMT3A-206ENST00000406659 POLD4Q9HCU8 107 aa27.24■■□□□ 1.95
DNMT3A-206ENST00000406659 LZTFL1Q9NQ48 299 aa27.24■■□□□ 1.95
DNMT3A-206ENST00000406659 OLFML3Q9NRN5 406 aa27.24■■□□□ 1.95
DNMT3A-206ENST00000406659 TBC1D22BQ9NU19 505 aa27.24■■□□□ 1.95
DNMT3A-206ENST00000406659 KCND2Q9NZV8 630 aa27.24■■□□□ 1.95
DNMT3A-206ENST00000406659 WRAP73Q9P2S5 460 aaPredicted RBP27.24■■□□□ 1.95
DNMT3A-206ENST00000406659 ADAMTS5Q9UNA0 930 aa27.24■■□□□ 1.95
DNMT3A-206ENST00000406659 AFG3L2Q9Y4W6 797 aa27.24■■□□□ 1.95
DNMT3A-206ENST00000406659 EPN1Q9Y6I3 576 aaPredicted RBP27.24■■□□□ 1.95
DNMT3A-206ENST00000406659 PHIPQ8WWQ0 1821 aa27.23■■□□□ 1.95
DNMT3A-206ENST00000406659 ARHGEF35A5YM69 484 aa27.23■■□□□ 1.95
DNMT3A-206ENST00000406659 USP2O75604 605 aaPredicted RBP27.23■■□□□ 1.95
DNMT3A-206ENST00000406659 GCNT3O95395 438 aa27.23■■□□□ 1.95
DNMT3A-206ENST00000406659 P4HBP07237 508 aaKnown RBP27.23■■□□□ 1.95
DNMT3A-206ENST00000406659 ERCC3P19447 782 aa27.23■■□□□ 1.95
DNMT3A-206ENST00000406659 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.23■■□□□ 1.95
DNMT3A-206ENST00000406659 ADARB2Q9NS39 739 aaKnown RBP27.23■■□□□ 1.95
DNMT3A-206ENST00000406659 TRAF3IP3Q9Y228 551 aa27.23■■□□□ 1.95
DNMT3A-206ENST00000406659 SBF1O95248 1867 aa27.23■■□□□ 1.95
DNMT3A-206ENST00000406659 SFI1A8K8P3 1242 aa27.22■■□□□ 1.95
DNMT3A-206ENST00000406659 PDXKO00764 312 aa27.22■■□□□ 1.95
DNMT3A-206ENST00000406659 MARSP56192 900 aaKnown RBP27.22■■□□□ 1.95
DNMT3A-206ENST00000406659 ITGB3BPQ13352 177 aaPredicted RBP27.22■■□□□ 1.95
DNMT3A-206ENST00000406659 MEA1Q16626 185 aa27.22■■□□□ 1.95
DNMT3A-206ENST00000406659 BMT2Q1RMZ1 405 aa27.22■■□□□ 1.95
DNMT3A-206ENST00000406659 SLU7O95391 586 aaKnown RBP27.22■■□□□ 1.95
DNMT3A-206ENST00000406659 NR2F2P24468 414 aa27.22■■□□□ 1.95
DNMT3A-206ENST00000406659 XRRA1Q6P2D8 792 aa27.22■■□□□ 1.95
DNMT3A-206ENST00000406659 WDR59Q6PJI9 974 aa27.22■■□□□ 1.95
DNMT3A-206ENST00000406659 ZSWIM4Q9H7M6 989 aa27.22■■□□□ 1.95
DNMT3A-206ENST00000406659 PARVGQ9HBI0 331 aa27.22■■□□□ 1.95
DNMT3A-206ENST00000406659 RNF181Q9P0P0 153 aa27.22■■□□□ 1.95
DNMT3A-206ENST00000406659 SEL1LQ9UBV2 794 aa27.22■■□□□ 1.95
DNMT3A-206ENST00000406659 SAMM50Q9Y512 469 aa27.22■■□□□ 1.95
DNMT3A-206ENST00000406659 UTP18Q9Y5J1 556 aaKnown RBP eCLIP27.22■■□□□ 1.95
DNMT3A-206ENST00000406659 POLR2AP24928 1970 aaKnown RBP27.21■■□□□ 1.95
DNMT3A-206ENST00000406659 NDUFA10O95299 355 aa27.21■■□□□ 1.95
DNMT3A-206ENST00000406659 HOXD13P35453 343 aa27.21■■□□□ 1.95
DNMT3A-206ENST00000406659 TRIM59Q8IWR1 403 aa27.21■■□□□ 1.95
DNMT3A-206ENST00000406659 DCPSQ96C86 337 aaKnown RBP27.21■■□□□ 1.95
DNMT3A-206ENST00000406659 WDR24Q96S15 920 aa27.21■■□□□ 1.95
DNMT3A-206ENST00000406659 FAM207AQ9NSI2 230 aaPredicted RBP27.21■■□□□ 1.95
DNMT3A-206ENST00000406659 HOXC10Q9NYD6 342 aa27.21■■□□□ 1.95
DNMT3A-206ENST00000406659 ODF2LQ9ULJ1 636 aa27.21■■□□□ 1.95
DNMT3A-206ENST00000406659 RLFQ13129 1914 aa27.2■■□□□ 1.95
DNMT3A-206ENST00000406659 KIF5CO60282 957 aa27.2■■□□□ 1.95
DNMT3A-206ENST00000406659 URI1O94763 535 aaPredicted RBP27.2■■□□□ 1.95
DNMT3A-206ENST00000406659 CCND2P30279 289 aa27.2■■□□□ 1.95
DNMT3A-206ENST00000406659 MAP3K9P80192 1104 aa27.2■■□□□ 1.95
DNMT3A-206ENST00000406659 ARHGAP29Q52LW3 1261 aa27.2■■□□□ 1.95
DNMT3A-206ENST00000406659 PURBQ96QR8 312 aaKnown RBP27.2■■□□□ 1.95
DNMT3A-206ENST00000406659 TYW1Q9NV66 732 aaKnown RBP27.2■■□□□ 1.95
DNMT3A-206ENST00000406659 ZNF215Q9UL58 517 aaPredicted RBP27.2■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms