RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 PPP1R3GB7ZBB8 358 aa10.85□□□□□ -0.67
NUP43-204ENST00000403890 H3BRB1 525 aa10.85□□□□□ -0.67
NUP43-204ENST00000403890 M0R2C6 588 aa10.85□□□□□ -0.67
NUP43-204ENST00000403890 TOP1P11387 765 aaKnown RBP10.85□□□□□ -0.67
NUP43-204ENST00000403890 GNAT1P11488 350 aa10.85□□□□□ -0.67
NUP43-204ENST00000403890 MTMR3Q13615 1198 aa10.85□□□□□ -0.67
NUP43-204ENST00000403890 PUM1Q14671 1186 aaKnown RBP eCLIP10.85□□□□□ -0.67
NUP43-204ENST00000403890 CELF3Q5SZQ8 465 aaKnown RBP10.85□□□□□ -0.67
NUP43-204ENST00000403890 ARHGEF16Q5VV41 709 aa10.85□□□□□ -0.67
NUP43-204ENST00000403890 MICAL1Q8TDZ2 1067 aa10.85□□□□□ -0.67
NUP43-204ENST00000403890 ATP8B4Q8TF62 1192 aa10.85□□□□□ -0.67
NUP43-204ENST00000403890 NEK1Q96PY6 1258 aa10.85□□□□□ -0.67
NUP43-204ENST00000403890 IRX2Q9BZI1 471 aaPredicted RBP10.85□□□□□ -0.67
NUP43-204ENST00000403890 TUT1Q9H6E5 874 aaKnown RBP10.85□□□□□ -0.67
NUP43-204ENST00000403890 SORCS3Q9UPU3 1222 aa10.85□□□□□ -0.67
NUP43-204ENST00000403890 PCDHGC5Q9Y5F6 944 aa10.85□□□□□ -0.67
NUP43-204ENST00000403890 MRPL42Q9Y6G3 142 aaKnown RBP10.85□□□□□ -0.67
NUP43-204ENST00000403890 SPTBN2O15020 2390 aa10.85□□□□□ -0.67
NUP43-204ENST00000403890 MYO10Q9HD67 2058 aa10.85□□□□□ -0.67
NUP43-204ENST00000403890 PER2O15055 1255 aa10.84□□□□□ -0.67
NUP43-204ENST00000403890 BRD1O95696 1058 aa10.84□□□□□ -0.67
NUP43-204ENST00000403890 NR3C2P08235 984 aa10.84□□□□□ -0.67
NUP43-204ENST00000403890 KCNV1Q6PIU1 500 aa10.84□□□□□ -0.67
NUP43-204ENST00000403890 MCF2L2Q86YR7 1114 aa10.84□□□□□ -0.67
NUP43-204ENST00000403890 CMTR2Q8IYT2 770 aaKnown RBP10.84□□□□□ -0.67
NUP43-204ENST00000403890 ANKK1Q8NFD2 765 aa10.84□□□□□ -0.67
NUP43-204ENST00000403890 KCNG4Q8TDN1 519 aa10.84□□□□□ -0.67
NUP43-204ENST00000403890 CDCA3Q99618 268 aaPredicted RBP10.84□□□□□ -0.67
NUP43-204ENST00000403890 TMEM47Q9BQJ4 181 aa10.84□□□□□ -0.67
NUP43-204ENST00000403890 S1PR5Q9H228 398 aa10.84□□□□□ -0.67
NUP43-204ENST00000403890 MFSD1Q9H3U5 465 aa10.84□□□□□ -0.67
NUP43-204ENST00000403890 COL20A1Q9P218 1284 aa10.84□□□□□ -0.67
NUP43-204ENST00000403890 RABGEF1Q9UJ41 708 aa10.84□□□□□ -0.67
NUP43-204ENST00000403890 NR2E1Q9Y466 385 aa10.84□□□□□ -0.67
NUP43-204ENST00000403890 DMXL1Q9Y485 3027 aa10.84□□□□□ -0.67
NUP43-204ENST00000403890 SORBS3O60504 671 aa10.83□□□□□ -0.68
NUP43-204ENST00000403890 PPFIA3O75145 1194 aa10.83□□□□□ -0.68
NUP43-204ENST00000403890 GGPS1O95749 300 aa10.83□□□□□ -0.68
NUP43-204ENST00000403890 CHRNA1P02708 482 aa10.83□□□□□ -0.68
NUP43-204ENST00000403890 SRGAP2BP0DMP2 458 aa10.83□□□□□ -0.68
NUP43-204ENST00000403890 GHRP10912 638 aa10.83□□□□□ -0.68
NUP43-204ENST00000403890 PDHBP11177 359 aa10.83□□□□□ -0.68
NUP43-204ENST00000403890 EIF2AK2P19525 551 aaKnown RBP10.83□□□□□ -0.68
NUP43-204ENST00000403890 SP100P23497 879 aaPredicted RBP10.83□□□□□ -0.68
NUP43-204ENST00000403890 RBM10P98175 930 aaKnown RBP10.83□□□□□ -0.68
NUP43-204ENST00000403890 CTDSPL2Q05D32 466 aa10.83□□□□□ -0.68
NUP43-204ENST00000403890 ZNF543Q08ER8 600 aa10.83□□□□□ -0.68
NUP43-204ENST00000403890 SIRT2Q8IXJ6 389 aa10.83□□□□□ -0.68
NUP43-204ENST00000403890 KIAA2013Q8IYS2 634 aa10.83□□□□□ -0.68
NUP43-204ENST00000403890 VN1R2Q8NFZ6 395 aa10.83□□□□□ -0.68
NUP43-204ENST00000403890 SEMA4AQ9H3S1 761 aa10.83□□□□□ -0.68
NUP43-204ENST00000403890 EHMT1Q9H9B1 1298 aa10.83□□□□□ -0.68
NUP43-204ENST00000403890 TSHZ2Q9NRE2 1034 aa10.83□□□□□ -0.68
NUP43-204ENST00000403890 ECHDC1Q9NTX5 307 aa10.83□□□□□ -0.68
NUP43-204ENST00000403890 SETD4Q9NVD3 440 aa10.83□□□□□ -0.68
NUP43-204ENST00000403890 TTC3P53804 2025 aa10.83□□□□□ -0.68
NUP43-204ENST00000403890 MYH7BA7E2Y1 1941 aa10.82□□□□□ -0.68
NUP43-204ENST00000403890 KIAA1217Q5T5P2 1943 aa10.82□□□□□ -0.68
NUP43-204ENST00000403890 ORC4O43929 436 aa10.82□□□□□ -0.68
NUP43-204ENST00000403890 LMNAP02545 664 aaKnown RBP10.82□□□□□ -0.68
NUP43-204ENST00000403890 TGFB3P10600 412 aa10.82□□□□□ -0.68
NUP43-204ENST00000403890 HSPD1P10809 573 aaKnown RBP10.82□□□□□ -0.68
NUP43-204ENST00000403890 TMEM184AQ6ZMB5 413 aa10.82□□□□□ -0.68
NUP43-204ENST00000403890 NYAP1Q6ZVC0 841 aa10.82□□□□□ -0.68
NUP43-204ENST00000403890 USP26Q9BXU7 913 aa10.82□□□□□ -0.68
NUP43-204ENST00000403890 MLXIPQ9HAP2 919 aa10.82□□□□□ -0.68
NUP43-204ENST00000403890 PXMP2Q9NR77 195 aa10.82□□□□□ -0.68
NUP43-204ENST00000403890 DNAH14Q0VDD8 3507 aa10.82□□□□□ -0.68
NUP43-204ENST00000403890 ABCB11O95342 1321 aa10.82□□□□□ -0.68
NUP43-204ENST00000403890 LGALS2P05162 132 aa10.81□□□□□ -0.68
NUP43-204ENST00000403890 TECP42680 631 aa10.81□□□□□ -0.68
NUP43-204ENST00000403890 SP2Q02086 613 aa10.81□□□□□ -0.68
NUP43-204ENST00000403890 UBE3AQ05086 875 aa10.81□□□□□ -0.68
NUP43-204ENST00000403890 LPIN1Q14693 890 aa10.81□□□□□ -0.68
NUP43-204ENST00000403890 DUSP6Q16828 381 aa10.81□□□□□ -0.68
NUP43-204ENST00000403890 PAN2Q504Q3 1202 aaKnown RBP10.81□□□□□ -0.68
NUP43-204ENST00000403890 PDE12Q6L8Q7 609 aaKnown RBP10.81□□□□□ -0.68
NUP43-204ENST00000403890 ANKRD54Q6NXT1 300 aa10.81□□□□□ -0.68
NUP43-204ENST00000403890 SYCE2Q6PIF2 218 aa10.81□□□□□ -0.68
NUP43-204ENST00000403890 LAPTM4BQ86VI4 370 aa10.81□□□□□ -0.68
NUP43-204ENST00000403890 SEC62Q99442 399 aaKnown RBP10.81□□□□□ -0.68
NUP43-204ENST00000403890 LRRCC1Q9C099 1032 aa10.81□□□□□ -0.68
NUP43-204ENST00000403890 TCP11L1Q9NUJ3 509 aa10.81□□□□□ -0.68
NUP43-204ENST00000403890 CHD6Q8TD26 2715 aa10.81□□□□□ -0.68
NUP43-204ENST00000403890 BAHCC1Q9P281 2608 aa10.8□□□□□ -0.68
NUP43-204ENST00000403890 STAG3L1P0CL83 205 aa10.8□□□□□ -0.68
NUP43-204ENST00000403890 SNHG28P0DPA3 235 aa10.8□□□□□ -0.68
NUP43-204ENST00000403890 MYCLP12524 364 aaPredicted RBP10.8□□□□□ -0.68
NUP43-204ENST00000403890 HOXB8P17481 243 aaPredicted RBP10.8□□□□□ -0.68
NUP43-204ENST00000403890 UBA1P22314 1058 aaKnown RBP10.8□□□□□ -0.68
NUP43-204ENST00000403890 ADAM17P78536 824 aa10.8□□□□□ -0.68
NUP43-204ENST00000403890 ARHGAP4P98171 946 aa10.8□□□□□ -0.68
NUP43-204ENST00000403890 KCNC3Q14003 757 aa10.8□□□□□ -0.68
NUP43-204ENST00000403890 ANGPT1Q15389 498 aa10.8□□□□□ -0.68
NUP43-204ENST00000403890 GPATCH4Q5T3I0 446 aaKnown RBP10.8□□□□□ -0.68
NUP43-204ENST00000403890 NPAS4Q8IUM7 802 aa10.8□□□□□ -0.68
NUP43-204ENST00000403890 CRIPAKQ8N1N5 446 aa10.8□□□□□ -0.68
NUP43-204ENST00000403890 FLCNQ8NFG4 579 aa10.8□□□□□ -0.68
NUP43-204ENST00000403890 PANK1Q8TE04 598 aa10.8□□□□□ -0.68
NUP43-204ENST00000403890 LMBR1Q8WVP7 490 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms