RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 MKRN4PQ13434 485 aaPredicted RBP13.13□□□□□ -0.31
RBM39-206ENST00000403542 LLGL1Q15334 1064 aa13.13□□□□□ -0.31
RBM39-206ENST00000403542 ODF2Q5BJF6 829 aa13.13□□□□□ -0.31
RBM39-206ENST00000403542 TRAPPC3LQ5T215 181 aa13.13□□□□□ -0.31
RBM39-206ENST00000403542 SFR1Q86XK3 245 aa13.13□□□□□ -0.31
RBM39-206ENST00000403542 IQCKQ8N0W5 287 aa13.13□□□□□ -0.31
RBM39-206ENST00000403542 UBLCP1Q8WVY7 318 aaPredicted RBP13.13□□□□□ -0.31
RBM39-206ENST00000403542 NGLY1Q96IV0 654 aa13.13□□□□□ -0.31
RBM39-206ENST00000403542 INPP4AQ96PE3 977 aaPredicted RBP13.13□□□□□ -0.31
RBM39-206ENST00000403542 NEUROG2Q9H2A3 272 aa13.13□□□□□ -0.31
RBM39-206ENST00000403542 CHORDC1Q9UHD1 332 aaPredicted RBP13.13□□□□□ -0.31
RBM39-206ENST00000403542 THRAP3Q9Y2W1 955 aaKnown RBP13.13□□□□□ -0.31
RBM39-206ENST00000403542 ZBTB39O15060 712 aa13.13□□□□□ -0.31
RBM39-206ENST00000403542 CETN3O15182 167 aa13.13□□□□□ -0.31
RBM39-206ENST00000403542 POLD1P28340 1107 aa13.13□□□□□ -0.31
RBM39-206ENST00000403542 LSP1P33241 339 aa13.13□□□□□ -0.31
RBM39-206ENST00000403542 ALS2CLQ60I27 953 aa13.13□□□□□ -0.31
RBM39-206ENST00000403542 PRR5LQ6MZQ0 368 aa13.13□□□□□ -0.31
RBM39-206ENST00000403542 RNF10Q8N5U6 811 aaKnown RBP13.13□□□□□ -0.31
RBM39-206ENST00000403542 RBM46Q8TBY0 533 aaKnown RBP13.13□□□□□ -0.31
RBM39-206ENST00000403542 GDF3Q9NR23 364 aa13.13□□□□□ -0.31
RBM39-206ENST00000403542 USP40Q9NVE5 1235 aa13.13□□□□□ -0.31
RBM39-206ENST00000403542 CCDC88AQ3V6T2 1871 aa13.12□□□□□ -0.31
RBM39-206ENST00000403542 A0A087WUV0 522 aaPredicted RBP13.12□□□□□ -0.31
RBM39-206ENST00000403542 CHMP2AO43633 222 aa13.12□□□□□ -0.31
RBM39-206ENST00000403542 TTLL1O95922 423 aa13.12□□□□□ -0.31
RBM39-206ENST00000403542 UCHL3P15374 230 aa13.12□□□□□ -0.31
RBM39-206ENST00000403542 MRPL12P52815 198 aaKnown RBP13.12□□□□□ -0.31
RBM39-206ENST00000403542 HDLBPQ00341 1268 aaKnown RBP13.12□□□□□ -0.31
RBM39-206ENST00000403542 CHADLQ6NUI6 762 aa13.12□□□□□ -0.31
RBM39-206ENST00000403542 ALKBH5Q6P6C2 394 aaKnown RBP13.12□□□□□ -0.31
RBM39-206ENST00000403542 USP38Q8NB14 1042 aa13.12□□□□□ -0.31
RBM39-206ENST00000403542 PIGOQ8TEQ8 1089 aa13.12□□□□□ -0.31
RBM39-206ENST00000403542 P2RX7Q99572 595 aaKnown RBP13.12□□□□□ -0.31
RBM39-206ENST00000403542 ARMCX3Q9UH62 379 aaPredicted RBP13.12□□□□□ -0.31
RBM39-206ENST00000403542 SMIM23A6NLE4 172 aa13.12□□□□□ -0.31
RBM39-206ENST00000403542 DCDC2CA8MYV0 355 aa13.12□□□□□ -0.31
RBM39-206ENST00000403542 DAPK3O43293 454 aa13.12□□□□□ -0.31
RBM39-206ENST00000403542 GFPT2O94808 682 aa13.12□□□□□ -0.31
RBM39-206ENST00000403542 PLS1Q14651 629 aa13.12□□□□□ -0.31
RBM39-206ENST00000403542 ASPRV1Q53RT3 343 aa13.12□□□□□ -0.31
RBM39-206ENST00000403542 CATSPER3Q86XQ3 398 aa13.12□□□□□ -0.31
RBM39-206ENST00000403542 RDH13Q8NBN7 331 aa13.12□□□□□ -0.31
RBM39-206ENST00000403542 COL22A1Q8NFW1 1626 aaPredicted RBP13.12□□□□□ -0.31
RBM39-206ENST00000403542 U2AF1L4Q8WU68 220 aaKnown RBP13.12□□□□□ -0.31
RBM39-206ENST00000403542 CAVIN3Q969G5 261 aa13.12□□□□□ -0.31
RBM39-206ENST00000403542 REEP2Q9BRK0 252 aa13.12□□□□□ -0.31
RBM39-206ENST00000403542 KCTD10Q9H3F6 313 aa13.12□□□□□ -0.31
RBM39-206ENST00000403542 LUC7LQ9NQ29 371 aaKnown RBP13.12□□□□□ -0.31
RBM39-206ENST00000403542 RGL1Q9NZL6 768 aa13.12□□□□□ -0.31
RBM39-206ENST00000403542 SERPINB13Q9UIV8 391 aa13.12□□□□□ -0.31
RBM39-206ENST00000403542 COL14A1Q05707 1796 aaKnown RBP13.11□□□□□ -0.31
RBM39-206ENST00000403542 CNTNAP4Q9C0A0 1308 aa13.11□□□□□ -0.31
RBM39-206ENST00000403542 ESYT2A0FGR8 921 aa13.11□□□□□ -0.31
RBM39-206ENST00000403542 AKAP3O75969 853 aa13.11□□□□□ -0.31
RBM39-206ENST00000403542 GCNT3O95395 438 aa13.11□□□□□ -0.31
RBM39-206ENST00000403542 UBXN2AP68543 259 aa13.11□□□□□ -0.31
RBM39-206ENST00000403542 IFT88Q13099 833 aa13.11□□□□□ -0.31
RBM39-206ENST00000403542 PSMD2Q13200 908 aa13.11□□□□□ -0.31
RBM39-206ENST00000403542 EXOC3L4Q17RC7 722 aa13.11□□□□□ -0.31
RBM39-206ENST00000403542 QRICH1Q2TAL8 776 aa13.11□□□□□ -0.31
RBM39-206ENST00000403542 ICE2Q659A1 982 aa13.11□□□□□ -0.31
RBM39-206ENST00000403542 ZNF572Q7Z3I7 529 aaPredicted RBP13.11□□□□□ -0.31
RBM39-206ENST00000403542 DAAM2Q86T65 1068 aa13.11□□□□□ -0.31
RBM39-206ENST00000403542 GANQ9H2C0 597 aa13.11□□□□□ -0.31
RBM39-206ENST00000403542 OSGEPQ9NPF4 335 aa13.11□□□□□ -0.31
RBM39-206ENST00000403542 PCDHA2Q9Y5H9 948 aa13.11□□□□□ -0.31
RBM39-206ENST00000403542 KRIT1O00522 736 aa13.11□□□□□ -0.31
RBM39-206ENST00000403542 SART1O43290 800 aaKnown RBP13.11□□□□□ -0.31
RBM39-206ENST00000403542 CTNNA1P35221 906 aaKnown RBP13.11□□□□□ -0.31
RBM39-206ENST00000403542 ITIH3Q06033 890 aa13.11□□□□□ -0.31
RBM39-206ENST00000403542 CDC37Q16543 378 aaPredicted RBP13.11□□□□□ -0.31
RBM39-206ENST00000403542 COBLL1Q53SF7 1204 aa13.11□□□□□ -0.31
RBM39-206ENST00000403542 PROM2Q8N271 834 aa13.11□□□□□ -0.31
RBM39-206ENST00000403542 OTUD6BQ8N6M0 293 aa13.11□□□□□ -0.31
RBM39-206ENST00000403542 METTL13Q8N6R0 699 aa13.11□□□□□ -0.31
RBM39-206ENST00000403542 UHMK1Q8TAS1 419 aaKnown RBP13.11□□□□□ -0.31
RBM39-206ENST00000403542 TBC1D16Q8TBP0 767 aa13.11□□□□□ -0.31
RBM39-206ENST00000403542 BHMT2Q9H2M3 363 aa13.11□□□□□ -0.31
RBM39-206ENST00000403542 NR2E1Q9Y466 385 aa13.11□□□□□ -0.31
RBM39-206ENST00000403542 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.1□□□□□ -0.31
RBM39-206ENST00000403542 ZBTB5O15062 677 aa13.1□□□□□ -0.31
RBM39-206ENST00000403542 KIAA0754O94854 1291 aa13.1□□□□□ -0.31
RBM39-206ENST00000403542 HSD17B3P37058 310 aa13.1□□□□□ -0.31
RBM39-206ENST00000403542 IRF2BP2Q7Z5L9 587 aa13.1□□□□□ -0.31
RBM39-206ENST00000403542 SPICE1Q8N0Z3 855 aa13.1□□□□□ -0.31
RBM39-206ENST00000403542 IQCDQ96DY2 449 aa13.1□□□□□ -0.31
RBM39-206ENST00000403542 KCNQ5Q9NR82 932 aa13.1□□□□□ -0.31
RBM39-206ENST00000403542 NAGPAQ9UK23 515 aa13.1□□□□□ -0.31
RBM39-206ENST00000403542 PCDHGC5Q9Y5F6 944 aa13.1□□□□□ -0.31
RBM39-206ENST00000403542 TTI1O43156 1089 aa13.1□□□□□ -0.31
RBM39-206ENST00000403542 KIF4AO95239 1232 aa13.1□□□□□ -0.31
RBM39-206ENST00000403542 XRCC5P13010 732 aaKnown RBP13.1□□□□□ -0.31
RBM39-206ENST00000403542 PLCG2P16885 1265 aa13.1□□□□□ -0.31
RBM39-206ENST00000403542 PON1P27169 355 aa13.1□□□□□ -0.31
RBM39-206ENST00000403542 HOXD13P35453 343 aa13.1□□□□□ -0.31
RBM39-206ENST00000403542 MNAT1P51948 309 aa13.1□□□□□ -0.31
RBM39-206ENST00000403542 TNNC1P63316 161 aa13.1□□□□□ -0.31
RBM39-206ENST00000403542 SEMA3FQ13275 785 aa13.1□□□□□ -0.31
RBM39-206ENST00000403542 ZNF211Q13398 564 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms