RNA–Protein interactions for RNA: ENST00000400556.7

PPP4R1-203, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-203ENST00000400556 HDLBPQ00341 1268 aaKnown RBP11.59□□□□□ -0.55
PPP4R1-203ENST00000400556 ARSHQ5FYA8 562 aa11.59□□□□□ -0.55
PPP4R1-203ENST00000400556 MEI1Q5TIA1 1274 aa11.59□□□□□ -0.55
PPP4R1-203ENST00000400556 CCDC65Q8IXS2 484 aa11.59□□□□□ -0.55
PPP4R1-203ENST00000400556 IQCKQ8N0W5 287 aa11.59□□□□□ -0.55
PPP4R1-203ENST00000400556 UBLCP1Q8WVY7 318 aaPredicted RBP11.59□□□□□ -0.55
PPP4R1-203ENST00000400556 P2RX7Q99572 595 aaKnown RBP11.59□□□□□ -0.55
PPP4R1-203ENST00000400556 SEPT11Q9NVA2 429 aaKnown RBP11.59□□□□□ -0.55
PPP4R1-203ENST00000400556 ZNF543Q08ER8 600 aa11.59□□□□□ -0.55
PPP4R1-203ENST00000400556 NFIAQ12857 509 aa11.59□□□□□ -0.55
PPP4R1-203ENST00000400556 RBM46Q8TBY0 533 aaKnown RBP11.59□□□□□ -0.55
PPP4R1-203ENST00000400556 COL14A1Q05707 1796 aaKnown RBP11.59□□□□□ -0.55
PPP4R1-203ENST00000400556 A0A087WUV0 522 aaPredicted RBP11.58□□□□□ -0.56
PPP4R1-203ENST00000400556 SMIM23A6NLE4 172 aa11.58□□□□□ -0.56
PPP4R1-203ENST00000400556 ZBTB39O15060 712 aa11.58□□□□□ -0.56
PPP4R1-203ENST00000400556 HOXA13P31271 388 aaPredicted RBP11.58□□□□□ -0.56
PPP4R1-203ENST00000400556 ICE2Q659A1 982 aa11.58□□□□□ -0.56
PPP4R1-203ENST00000400556 GDF3Q9NR23 364 aa11.58□□□□□ -0.56
PPP4R1-203ENST00000400556 PCDHA1Q9Y5I3 950 aa11.58□□□□□ -0.56
PPP4R1-203ENST00000400556 COL16A1Q07092 1604 aaPredicted RBP11.58□□□□□ -0.56
PPP4R1-203ENST00000400556 PNMA6FA0A0J9YX94 578 aa11.58□□□□□ -0.56
PPP4R1-203ENST00000400556 DCDC2CA8MYV0 355 aa11.58□□□□□ -0.56
PPP4R1-203ENST00000400556 DAPK3O43293 454 aa11.58□□□□□ -0.56
PPP4R1-203ENST00000400556 GFPT2O94808 682 aa11.58□□□□□ -0.56
PPP4R1-203ENST00000400556 PDIA5Q14554 519 aa11.58□□□□□ -0.56
PPP4R1-203ENST00000400556 ODF2Q5BJF6 829 aa11.58□□□□□ -0.56
PPP4R1-203ENST00000400556 PRR5LQ6MZQ0 368 aa11.58□□□□□ -0.56
PPP4R1-203ENST00000400556 USP38Q8NB14 1042 aa11.58□□□□□ -0.56
PPP4R1-203ENST00000400556 PIGOQ8TEQ8 1089 aa11.58□□□□□ -0.56
PPP4R1-203ENST00000400556 NR2E1Q9Y466 385 aa11.58□□□□□ -0.56
PPP4R1-203ENST00000400556 DDX60LQ5H9U9 1706 aaKnown RBP11.58□□□□□ -0.56
PPP4R1-203ENST00000400556 CETN3O15182 167 aa11.58□□□□□ -0.56
PPP4R1-203ENST00000400556 CHMP2AO43633 222 aa11.58□□□□□ -0.56
PPP4R1-203ENST00000400556 UCHL3P15374 230 aa11.58□□□□□ -0.56
PPP4R1-203ENST00000400556 UBXN2AP68543 259 aa11.58□□□□□ -0.56
PPP4R1-203ENST00000400556 PLS1Q14651 629 aa11.58□□□□□ -0.56
PPP4R1-203ENST00000400556 ALS2CLQ60I27 953 aa11.58□□□□□ -0.56
PPP4R1-203ENST00000400556 ALKBH5Q6P6C2 394 aaKnown RBP11.58□□□□□ -0.56
PPP4R1-203ENST00000400556 RDH13Q8NBN7 331 aa11.58□□□□□ -0.56
PPP4R1-203ENST00000400556 UHMK1Q8TAS1 419 aaKnown RBP11.58□□□□□ -0.56
PPP4R1-203ENST00000400556 U2AF1L4Q8WU68 220 aaKnown RBP11.58□□□□□ -0.56
PPP4R1-203ENST00000400556 CAVIN3Q969G5 261 aa11.58□□□□□ -0.56
PPP4R1-203ENST00000400556 NGLY1Q96IV0 654 aa11.58□□□□□ -0.56
PPP4R1-203ENST00000400556 GANQ9H2C0 597 aa11.58□□□□□ -0.56
PPP4R1-203ENST00000400556 KCTD10Q9H3F6 313 aa11.58□□□□□ -0.56
PPP4R1-203ENST00000400556 OSGEPQ9NPF4 335 aa11.58□□□□□ -0.56
PPP4R1-203ENST00000400556 MYH7BA7E2Y1 1941 aa11.58□□□□□ -0.56
PPP4R1-203ENST00000400556 MYH4Q9Y623 1939 aa11.58□□□□□ -0.56
PPP4R1-203ENST00000400556 AKAP3O75969 853 aa11.57□□□□□ -0.56
PPP4R1-203ENST00000400556 IFT88Q13099 833 aa11.57□□□□□ -0.56
PPP4R1-203ENST00000400556 QRICH1Q2TAL8 776 aa11.57□□□□□ -0.56
PPP4R1-203ENST00000400556 TRAPPC3LQ5T215 181 aa11.57□□□□□ -0.56
PPP4R1-203ENST00000400556 ZNF572Q7Z3I7 529 aaPredicted RBP11.57□□□□□ -0.56
PPP4R1-203ENST00000400556 RNF10Q8N5U6 811 aaKnown RBP11.57□□□□□ -0.56
PPP4R1-203ENST00000400556 METTL13Q8N6R0 699 aa11.57□□□□□ -0.56
PPP4R1-203ENST00000400556 REEP2Q9BRK0 252 aa11.57□□□□□ -0.56
PPP4R1-203ENST00000400556 USP40Q9NVE5 1235 aa11.57□□□□□ -0.56
PPP4R1-203ENST00000400556 RGL1Q9NZL6 768 aa11.57□□□□□ -0.56
PPP4R1-203ENST00000400556 SART1O43290 800 aaKnown RBP11.57□□□□□ -0.56
PPP4R1-203ENST00000400556 MRPL12P52815 198 aaKnown RBP11.57□□□□□ -0.56
PPP4R1-203ENST00000400556 TBC1D10BQ4KMP7 808 aaPredicted RBP11.57□□□□□ -0.56
PPP4R1-203ENST00000400556 ASPRV1Q53RT3 343 aa11.57□□□□□ -0.56
PPP4R1-203ENST00000400556 CATSPER3Q86XQ3 398 aa11.57□□□□□ -0.56
PPP4R1-203ENST00000400556 OTUD6BQ8N6M0 293 aa11.57□□□□□ -0.56
PPP4R1-203ENST00000400556 ARMCX3Q9UH62 379 aaPredicted RBP11.57□□□□□ -0.56
PPP4R1-203ENST00000400556 SERPINB13Q9UIV8 391 aa11.57□□□□□ -0.56
PPP4R1-203ENST00000400556 NAV1Q8NEY1 1877 aa11.57□□□□□ -0.56
PPP4R1-203ENST00000400556 ESYT2A0FGR8 921 aa11.57□□□□□ -0.56
PPP4R1-203ENST00000400556 KRIT1O00522 736 aa11.57□□□□□ -0.56
PPP4R1-203ENST00000400556 TTI1O43156 1089 aa11.57□□□□□ -0.56
PPP4R1-203ENST00000400556 GCNT3O95395 438 aa11.57□□□□□ -0.56
PPP4R1-203ENST00000400556 TTLL1O95922 423 aa11.57□□□□□ -0.56
PPP4R1-203ENST00000400556 CTNNA1P35221 906 aaKnown RBP11.57□□□□□ -0.56
PPP4R1-203ENST00000400556 HSD17B3P37058 310 aa11.57□□□□□ -0.56
PPP4R1-203ENST00000400556 MNAT1P51948 309 aa11.57□□□□□ -0.56
PPP4R1-203ENST00000400556 ITIH3Q06033 890 aa11.57□□□□□ -0.56
PPP4R1-203ENST00000400556 ZNF211Q13398 564 aaPredicted RBP11.57□□□□□ -0.56
PPP4R1-203ENST00000400556 CDC37Q16543 378 aaPredicted RBP11.57□□□□□ -0.56
PPP4R1-203ENST00000400556 EXOC3L4Q17RC7 722 aa11.57□□□□□ -0.56
PPP4R1-203ENST00000400556 DAAM2Q86T65 1068 aa11.57□□□□□ -0.56
PPP4R1-203ENST00000400556 TRIM51Q9BSJ1 452 aa11.57□□□□□ -0.56
PPP4R1-203ENST00000400556 BHMT2Q9H2M3 363 aa11.57□□□□□ -0.56
PPP4R1-203ENST00000400556 THRAP3Q9Y2W1 955 aaKnown RBP11.57□□□□□ -0.56
PPP4R1-203ENST00000400556 PCDHA2Q9Y5H9 948 aa11.57□□□□□ -0.56
PPP4R1-203ENST00000400556 CNTNAP4Q9C0A0 1308 aa11.57□□□□□ -0.56
PPP4R1-203ENST00000400556 KIF4AO95239 1232 aa11.56□□□□□ -0.56
PPP4R1-203ENST00000400556 COBLL1Q53SF7 1204 aa11.56□□□□□ -0.56
PPP4R1-203ENST00000400556 IRF2BP2Q7Z5L9 587 aa11.56□□□□□ -0.56
PPP4R1-203ENST00000400556 CERS5Q8N5B7 392 aa11.56□□□□□ -0.56
PPP4R1-203ENST00000400556 LUC7LQ9NQ29 371 aaKnown RBP11.56□□□□□ -0.56
PPP4R1-203ENST00000400556 NOC2LQ9Y3T9 749 aaKnown RBP11.56□□□□□ -0.56
PPP4R1-203ENST00000400556 PCDHGC5Q9Y5F6 944 aa11.56□□□□□ -0.56
PPP4R1-203ENST00000400556 STRCQ7RTU9 1775 aa11.56□□□□□ -0.56
PPP4R1-203ENST00000400556 TNRC6CQ9HCJ0 1690 aaKnown RBP11.56□□□□□ -0.56
PPP4R1-203ENST00000400556 ZBTB5O15062 677 aa11.56□□□□□ -0.56
PPP4R1-203ENST00000400556 KIAA0754O94854 1291 aa11.56□□□□□ -0.56
PPP4R1-203ENST00000400556 HOXD13P35453 343 aa11.56□□□□□ -0.56
PPP4R1-203ENST00000400556 PSMD2Q13200 908 aa11.56□□□□□ -0.56
PPP4R1-203ENST00000400556 UAP1Q16222 522 aaPredicted RBP11.56□□□□□ -0.56
PPP4R1-203ENST00000400556 ZC2HC1CQ53FD0 456 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms