RNA–Protein interactions for RNA: ENST00000400353.6

LINC00649-202, long intergenic non-protein coding RNA 649, humanhuman

TSL 3

Gene LINC00649, Length 2,090 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-202ENST00000400353 ZNF277Q9NRM2 450 aaPredicted RBP11.86□□□□□ -0.51
LINC00649-202ENST00000400353 ZNF446Q9NWS9 450 aa11.86□□□□□ -0.51
LINC00649-202ENST00000400353 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.86□□□□□ -0.51
LINC00649-202ENST00000400353 UBE4BO95155 1302 aa11.86□□□□□ -0.51
LINC00649-202ENST00000400353 NPHP3-ACAD11A0A0J9YXS1 232 aa11.85□□□□□ -0.51
LINC00649-202ENST00000400353 CCDC151A5D8V7 595 aa11.85□□□□□ -0.51
LINC00649-202ENST00000400353 PDXKO00764 312 aa11.85□□□□□ -0.51
LINC00649-202ENST00000400353 ERLIN1O75477 346 aa11.85□□□□□ -0.51
LINC00649-202ENST00000400353 RPL13P26373 211 aaKnown RBP11.85□□□□□ -0.51
LINC00649-202ENST00000400353 HOXA13P31271 388 aaPredicted RBP11.85□□□□□ -0.51
LINC00649-202ENST00000400353 PABPC4Q13310 644 aaKnown RBP eCLIP11.85□□□□□ -0.51
LINC00649-202ENST00000400353 ADAM9Q13443 819 aa11.85□□□□□ -0.51
LINC00649-202ENST00000400353 TRAPPC11Q7Z392 1133 aa11.85□□□□□ -0.51
LINC00649-202ENST00000400353 KRT26Q7Z3Y9 468 aa11.85□□□□□ -0.51
LINC00649-202ENST00000400353 NELFCDQ8IXH7 590 aa11.85□□□□□ -0.51
LINC00649-202ENST00000400353 SAMD3Q8N6K7 520 aa11.85□□□□□ -0.51
LINC00649-202ENST00000400353 GLIS3Q8NEA6 775 aa11.85□□□□□ -0.51
LINC00649-202ENST00000400353 NEK9Q8TD19 979 aa11.85□□□□□ -0.51
LINC00649-202ENST00000400353 BAP1Q92560 729 aa11.85□□□□□ -0.51
LINC00649-202ENST00000400353 PARD6BQ9BYG5 372 aa11.85□□□□□ -0.51
LINC00649-202ENST00000400353 WDR11Q9BZH6 1224 aa11.85□□□□□ -0.51
LINC00649-202ENST00000400353 GBP3Q9H0R5 595 aa11.85□□□□□ -0.51
LINC00649-202ENST00000400353 FAM207AQ9NSI2 230 aaPredicted RBP11.85□□□□□ -0.51
LINC00649-202ENST00000400353 TBC1D7Q9P0N9 293 aa11.85□□□□□ -0.51
LINC00649-202ENST00000400353 PNMA2Q9UL42 364 aa11.85□□□□□ -0.51
LINC00649-202ENST00000400353 SLC16A3O15427 465 aaKnown RBP11.85□□□□□ -0.51
LINC00649-202ENST00000400353 CFBP00751 764 aa11.85□□□□□ -0.51
LINC00649-202ENST00000400353 EPS15P42566 896 aa11.85□□□□□ -0.51
LINC00649-202ENST00000400353 PRELPP51888 382 aa11.85□□□□□ -0.51
LINC00649-202ENST00000400353 KIF11P52732 1056 aa11.85□□□□□ -0.51
LINC00649-202ENST00000400353 KNOP1Q1ED39 458 aaKnown RBP11.85□□□□□ -0.51
LINC00649-202ENST00000400353 LRCH2Q5VUJ6 765 aa11.85□□□□□ -0.51
LINC00649-202ENST00000400353 CC2D1AQ6P1N0 951 aaPredicted RBP11.85□□□□□ -0.51
LINC00649-202ENST00000400353 CCDC174Q6PII3 467 aa11.85□□□□□ -0.51
LINC00649-202ENST00000400353 RRAGAQ7L523 313 aa11.85□□□□□ -0.51
LINC00649-202ENST00000400353 REEP2Q9BRK0 252 aa11.85□□□□□ -0.51
LINC00649-202ENST00000400353 ZHX3Q9H4I2 956 aa11.85□□□□□ -0.51
LINC00649-202ENST00000400353 METTL14Q9HCE5 456 aaKnown RBP11.85□□□□□ -0.51
LINC00649-202ENST00000400353 ARFGAP3Q9NP61 516 aa11.85□□□□□ -0.51
LINC00649-202ENST00000400353 TYW1Q9NV66 732 aaKnown RBP11.85□□□□□ -0.51
LINC00649-202ENST00000400353 KCND2Q9NZV8 630 aa11.85□□□□□ -0.51
LINC00649-202ENST00000400353 LRRC53A6NM62 1247 aa11.84□□□□□ -0.51
LINC00649-202ENST00000400353 EIF3DO15371 548 aaKnown RBP eCLIP11.84□□□□□ -0.51
LINC00649-202ENST00000400353 AKR1B10O60218 316 aa11.84□□□□□ -0.51
LINC00649-202ENST00000400353 TACC1O75410 805 aa11.84□□□□□ -0.51
LINC00649-202ENST00000400353 PSMD10O75832 226 aa11.84□□□□□ -0.51
LINC00649-202ENST00000400353 KCNA3P22001 575 aa11.84□□□□□ -0.51
LINC00649-202ENST00000400353 KCNMA1Q12791 1236 aa11.84□□□□□ -0.51
LINC00649-202ENST00000400353 NFIL3Q16649 462 aa11.84□□□□□ -0.51
LINC00649-202ENST00000400353 KIAA1755Q5JYT7 1200 aa11.84□□□□□ -0.51
LINC00649-202ENST00000400353 SFMBT2Q5VUG0 894 aa11.84□□□□□ -0.51
LINC00649-202ENST00000400353 STXBP4Q6ZWJ1 553 aa11.84□□□□□ -0.51
LINC00649-202ENST00000400353 OTOP1Q7RTM1 612 aa11.84□□□□□ -0.51
LINC00649-202ENST00000400353 SFR1Q86XK3 245 aa11.84□□□□□ -0.51
LINC00649-202ENST00000400353 TRIM58Q8NG06 486 aa11.84□□□□□ -0.51
LINC00649-202ENST00000400353 HNRNPLLQ8WVV9 542 aaKnown RBP11.84□□□□□ -0.51
LINC00649-202ENST00000400353 LSM14BQ9BX40 385 aaKnown RBP11.84□□□□□ -0.51
LINC00649-202ENST00000400353 OLFML3Q9NRN5 406 aa11.84□□□□□ -0.51
LINC00649-202ENST00000400353 ARHGAP20Q9P2F6 1191 aa11.84□□□□□ -0.51
LINC00649-202ENST00000400353 SEL1LQ9UBV2 794 aa11.84□□□□□ -0.51
LINC00649-202ENST00000400353 PUF60Q9UHX1 559 aaKnown RBP11.84□□□□□ -0.51
LINC00649-202ENST00000400353 RAB21Q9UL25 225 aa11.84□□□□□ -0.51
LINC00649-202ENST00000400353 PCDHA13Q9Y5I0 950 aa11.84□□□□□ -0.51
LINC00649-202ENST00000400353 FHOD1Q9Y613 1164 aa11.84□□□□□ -0.51
LINC00649-202ENST00000400353 SAR1BQ9Y6B6 198 aa11.84□□□□□ -0.51
LINC00649-202ENST00000400353 PJA2O43164 708 aa11.83□□□□□ -0.51
LINC00649-202ENST00000400353 GAS7O60861 476 aa11.83□□□□□ -0.51
LINC00649-202ENST00000400353 ABL1P00519 1130 aa11.83□□□□□ -0.51
LINC00649-202ENST00000400353 SERPING1P05155 500 aa11.83□□□□□ -0.51
LINC00649-202ENST00000400353 PNMA6AP0CW24 399 aaPredicted RBP11.83□□□□□ -0.51
LINC00649-202ENST00000400353 MCM3P25205 808 aa11.83□□□□□ -0.51
LINC00649-202ENST00000400353 EIF4A3P38919 411 aaKnown RBP11.83□□□□□ -0.51
LINC00649-202ENST00000400353 PSMC6P62333 389 aa11.83□□□□□ -0.51
LINC00649-202ENST00000400353 TNFAIP1Q13829 316 aa11.83□□□□□ -0.51
LINC00649-202ENST00000400353 EPHA7Q15375 998 aa11.83□□□□□ -0.51
LINC00649-202ENST00000400353 SLC9C1Q4G0N8 1177 aa11.83□□□□□ -0.51
LINC00649-202ENST00000400353 CEP55Q53EZ4 464 aa11.83□□□□□ -0.51
LINC00649-202ENST00000400353 CIAPIN1Q6FI81 312 aa11.83□□□□□ -0.51
LINC00649-202ENST00000400353 IQCEQ6IPM2 695 aa11.83□□□□□ -0.51
LINC00649-202ENST00000400353 NIPA1Q7RTP0 329 aa11.83□□□□□ -0.51
LINC00649-202ENST00000400353 MCF2L2Q86YR7 1114 aa11.83□□□□□ -0.51
LINC00649-202ENST00000400353 HSD17B14Q9BPX1 270 aa11.83□□□□□ -0.51
LINC00649-202ENST00000400353 TEKT3Q9BXF9 490 aa11.83□□□□□ -0.51
LINC00649-202ENST00000400353 FGFBP2Q9BYJ0 223 aa11.83□□□□□ -0.51
LINC00649-202ENST00000400353 IFIH1Q9BYX4 1025 aaKnown RBP11.83□□□□□ -0.51
LINC00649-202ENST00000400353 SPON1Q9HCB6 807 aa11.83□□□□□ -0.51
LINC00649-202ENST00000400353 MAP3K20Q9NYL2 800 aaKnown RBP11.83□□□□□ -0.51
LINC00649-202ENST00000400353 TRIM10Q9UDY6 481 aa11.83□□□□□ -0.51
LINC00649-202ENST00000400353 PGAP2Q9UHJ9 254 aa11.83□□□□□ -0.51
LINC00649-202ENST00000400353 COL4A5P29400 1685 aa11.83□□□□□ -0.52
LINC00649-202ENST00000400353 ATAD5Q96QE3 1844 aa11.83□□□□□ -0.52
LINC00649-202ENST00000400353 MEIS1O00470 390 aa11.83□□□□□ -0.52
LINC00649-202ENST00000400353 EPHB6O15197 1021 aa11.83□□□□□ -0.52
LINC00649-202ENST00000400353 WDR46O15213 610 aaKnown RBP11.83□□□□□ -0.52
LINC00649-202ENST00000400353 FAM13AO94988 1023 aa11.83□□□□□ -0.52
LINC00649-202ENST00000400353 NR2F2P24468 414 aa11.83□□□□□ -0.52
LINC00649-202ENST00000400353 TGFB2P61812 414 aa11.83□□□□□ -0.52
LINC00649-202ENST00000400353 CACNB1Q02641 598 aaPredicted RBP11.83□□□□□ -0.52
LINC00649-202ENST00000400353 TNIP1Q15025 636 aa11.83□□□□□ -0.52
LINC00649-202ENST00000400353 LDHDQ86WU2 507 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms