RNA–Protein interactions for RNA: ENST00000399641.5

CACNA1C-217, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-217ENST00000399641 TBC1D2Q9BYX2 928 aa11.97□□□□□ -0.49
CACNA1C-217ENST00000399641 FAM207AQ9NSI2 230 aaPredicted RBP11.97□□□□□ -0.49
CACNA1C-217ENST00000399641 PACSIN2Q9UNF0 486 aaPredicted RBP11.97□□□□□ -0.49
CACNA1C-217ENST00000399641 MCCD1P59942 119 aaPredicted RBP11.97□□□□□ -0.49
CACNA1C-217ENST00000399641 CDC37Q16543 378 aaPredicted RBP11.97□□□□□ -0.49
CACNA1C-217ENST00000399641 VWA3BQ502W6 1294 aa11.97□□□□□ -0.49
CACNA1C-217ENST00000399641 RRAGAQ7L523 313 aa11.97□□□□□ -0.49
CACNA1C-217ENST00000399641 STAMQ92783 540 aa11.97□□□□□ -0.49
CACNA1C-217ENST00000399641 MIS12Q9H081 205 aa11.97□□□□□ -0.49
CACNA1C-217ENST00000399641 PCDHB13Q9Y5F0 798 aa11.97□□□□□ -0.49
CACNA1C-217ENST00000399641 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.97□□□□□ -0.49
CACNA1C-217ENST00000399641 ZHX2Q9Y6X8 837 aa11.97□□□□□ -0.49
CACNA1C-217ENST00000399641 ZNF233A6NK53 670 aa11.97□□□□□ -0.49
CACNA1C-217ENST00000399641 IGFBP4P22692 258 aa11.97□□□□□ -0.49
CACNA1C-217ENST00000399641 MSH2P43246 934 aa11.97□□□□□ -0.49
CACNA1C-217ENST00000399641 GRIN1Q05586 938 aa11.97□□□□□ -0.49
CACNA1C-217ENST00000399641 RALGDSQ12967 914 aa11.97□□□□□ -0.49
CACNA1C-217ENST00000399641 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.97□□□□□ -0.49
CACNA1C-217ENST00000399641 MAGEB10Q96LZ2 347 aaPredicted RBP11.97□□□□□ -0.49
CACNA1C-217ENST00000399641 MMP19Q99542 508 aa11.97□□□□□ -0.49
CACNA1C-217ENST00000399641 HYOU1Q9Y4L1 999 aa11.97□□□□□ -0.49
CACNA1C-217ENST00000399641 PTPRKQ15262 1439 aa11.97□□□□□ -0.49
CACNA1C-217ENST00000399641 GSNP06396 782 aa11.97□□□□□ -0.49
CACNA1C-217ENST00000399641 CIITAP33076 1130 aa11.97□□□□□ -0.49
CACNA1C-217ENST00000399641 HDLBPQ00341 1268 aaKnown RBP11.97□□□□□ -0.49
CACNA1C-217ENST00000399641 SFMBT2Q5VUG0 894 aa11.97□□□□□ -0.49
CACNA1C-217ENST00000399641 HEATR4Q86WZ0 1026 aa11.97□□□□□ -0.49
CACNA1C-217ENST00000399641 REXO1Q8N1G1 1221 aaKnown RBP11.97□□□□□ -0.49
CACNA1C-217ENST00000399641 STX19Q8N4C7 294 aa11.97□□□□□ -0.49
CACNA1C-217ENST00000399641 SH3KBP1Q96B97 665 aa11.97□□□□□ -0.49
CACNA1C-217ENST00000399641 NPHP4O75161 1426 aaPredicted RBP11.97□□□□□ -0.49
CACNA1C-217ENST00000399641 SMCO2A6NFE2 343 aa11.96□□□□□ -0.49
CACNA1C-217ENST00000399641 TRIM27P14373 513 aa11.96□□□□□ -0.49
CACNA1C-217ENST00000399641 MTMR3Q13615 1198 aa11.96□□□□□ -0.49
CACNA1C-217ENST00000399641 SH3GL3Q99963 347 aa11.96□□□□□ -0.49
CACNA1C-217ENST00000399641 YIPF3Q9GZM5 350 aa11.96□□□□□ -0.49
CACNA1C-217ENST00000399641 SSTR3P32745 418 aaPredicted RBP11.96□□□□□ -0.49
CACNA1C-217ENST00000399641 ATXN3P54252 364 aaPredicted RBP11.96□□□□□ -0.49
CACNA1C-217ENST00000399641 IBTKQ9P2D0 1353 aaPredicted RBP11.96□□□□□ -0.49
CACNA1C-217ENST00000399641 CPP00450 1065 aa11.96□□□□□ -0.49
CACNA1C-217ENST00000399641 PMLP29590 882 aa11.96□□□□□ -0.49
CACNA1C-217ENST00000399641 MRPS35P82673 323 aaKnown RBP11.96□□□□□ -0.49
CACNA1C-217ENST00000399641 RC3H1Q5TC82 1133 aaKnown RBP11.96□□□□□ -0.49
CACNA1C-217ENST00000399641 UXS1Q8NBZ7 420 aa11.96□□□□□ -0.49
CACNA1C-217ENST00000399641 SENP1Q9P0U3 644 aa11.96□□□□□ -0.49
CACNA1C-217ENST00000399641 TRAF3IP3Q9Y228 551 aa11.96□□□□□ -0.49
CACNA1C-217ENST00000399641 SNX5Q9Y5X3 404 aa11.96□□□□□ -0.49
CACNA1C-217ENST00000399641 ZNF532Q9HCE3 1301 aa11.96□□□□□ -0.49
CACNA1C-217ENST00000399641 IFNA8P32881 189 aa11.96□□□□□ -0.5
CACNA1C-217ENST00000399641 UBAP1Q9NZ09 502 aa11.96□□□□□ -0.5
CACNA1C-217ENST00000399641 ZNF148Q9UQR1 794 aa11.96□□□□□ -0.5
CACNA1C-217ENST00000399641 GPAA1O43292 621 aa11.96□□□□□ -0.5
CACNA1C-217ENST00000399641 IFT88Q13099 833 aa11.96□□□□□ -0.5
CACNA1C-217ENST00000399641 HADHQ16836 314 aaKnown RBP11.96□□□□□ -0.5
CACNA1C-217ENST00000399641 ACCSLQ4AC99 568 aa11.96□□□□□ -0.5
CACNA1C-217ENST00000399641 DDX53Q86TM3 631 aaKnown RBP11.96□□□□□ -0.5
CACNA1C-217ENST00000399641 ZC3H18Q86VM9 953 aaKnown RBP11.96□□□□□ -0.5
CACNA1C-217ENST00000399641 CENPKQ9BS16 269 aa11.96□□□□□ -0.5
CACNA1C-217ENST00000399641 KLHL31Q9H511 634 aa11.96□□□□□ -0.5
CACNA1C-217ENST00000399641 RERGLQ9H628 205 aa11.96□□□□□ -0.5
CACNA1C-217ENST00000399641 KLF15Q9UIH9 416 aa11.96□□□□□ -0.5
CACNA1C-217ENST00000399641 AMFRQ9UKV5 643 aa11.96□□□□□ -0.5
CACNA1C-217ENST00000399641 L3MBTL1Q9Y468 752 aa11.96□□□□□ -0.5
CACNA1C-217ENST00000399641 CHRNDQ07001 517 aa11.95□□□□□ -0.5
CACNA1C-217ENST00000399641 CDKL2Q92772 493 aa11.95□□□□□ -0.5
CACNA1C-217ENST00000399641 CCT7Q99832 543 aa11.95□□□□□ -0.5
CACNA1C-217ENST00000399641 hCG_1642624A0A1W2PR95 340 aa11.95□□□□□ -0.5
CACNA1C-217ENST00000399641 AGRPO00253 132 aa11.95□□□□□ -0.5
CACNA1C-217ENST00000399641 KRT75O95678 551 aa11.95□□□□□ -0.5
CACNA1C-217ENST00000399641 KRT4P19013 534 aa11.95□□□□□ -0.5
CACNA1C-217ENST00000399641 ERFP50548 548 aa11.95□□□□□ -0.5
CACNA1C-217ENST00000399641 TBC1D9Q6ZT07 1266 aa11.95□□□□□ -0.5
CACNA1C-217ENST00000399641 CATSPER4Q7RTX7 472 aa11.95□□□□□ -0.5
CACNA1C-217ENST00000399641 FBXL21Q9UKT6 434 aa11.95□□□□□ -0.5
CACNA1C-217ENST00000399641 MAP3K13O43283 966 aa11.95□□□□□ -0.5
CACNA1C-217ENST00000399641 AOC3Q16853 763 aa11.95□□□□□ -0.5
CACNA1C-217ENST00000399641 BTN2A1Q7KYR7 527 aa11.95□□□□□ -0.5
CACNA1C-217ENST00000399641 TMEM87BQ96K49 555 aa11.95□□□□□ -0.5
CACNA1C-217ENST00000399641 ABCC10Q5T3U5 1492 aa11.95□□□□□ -0.5
CACNA1C-217ENST00000399641 SLCO1A2P46721 670 aa11.95□□□□□ -0.5
CACNA1C-217ENST00000399641 CFAP221Q4G0U5 840 aa11.95□□□□□ -0.5
CACNA1C-217ENST00000399641 TWF2Q6IBS0 349 aaKnown RBP11.95□□□□□ -0.5
CACNA1C-217ENST00000399641 PI4K2BQ8TCG2 481 aa11.95□□□□□ -0.5
CACNA1C-217ENST00000399641 FAM149B1Q96BN6 582 aa11.95□□□□□ -0.5
CACNA1C-217ENST00000399641 KIFC3Q9BVG8 833 aa11.95□□□□□ -0.5
CACNA1C-217ENST00000399641 TRIM15Q9C019 465 aa11.95□□□□□ -0.5
CACNA1C-217ENST00000399641 CDC40O60508 579 aaKnown RBP eCLIP11.95□□□□□ -0.5
CACNA1C-217ENST00000399641 KLHL40Q2TBA0 621 aa11.95□□□□□ -0.5
CACNA1C-217ENST00000399641 TNNI3KQ59H18 835 aa11.95□□□□□ -0.5
CACNA1C-217ENST00000399641 TRIM69Q86WT6 500 aa11.95□□□□□ -0.5
CACNA1C-217ENST00000399641 STAG2Q8N3U4 1231 aa11.95□□□□□ -0.5
CACNA1C-217ENST00000399641 TMX3Q96JJ7 454 aa11.95□□□□□ -0.5
CACNA1C-217ENST00000399641 FGFR1OP2Q9NVK5 253 aa11.95□□□□□ -0.5
CACNA1C-217ENST00000399641 LRRC53A6NM62 1247 aa11.94□□□□□ -0.5
CACNA1C-217ENST00000399641 PPP1R2P41236 205 aa11.94□□□□□ -0.5
CACNA1C-217ENST00000399641 VEPH1Q14D04 833 aa11.94□□□□□ -0.5
CACNA1C-217ENST00000399641 CDHR1Q96JP9 859 aa11.94□□□□□ -0.5
CACNA1C-217ENST00000399641 LGR6Q9HBX8 967 aa11.94□□□□□ -0.5
CACNA1C-217ENST00000399641 DNAJC17Q9NVM6 304 aaKnown RBP11.94□□□□□ -0.5
CACNA1C-217ENST00000399641 TSC22D4Q9Y3Q8 395 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms