RNA–Protein interactions for RNA: ENST00000398339.5

TCF4-203, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-203ENST00000398339 C12orf60Q5U649 245 aa9.04□□□□□ -0.96
TCF4-203ENST00000398339 ZNF280DQ6N043 979 aa9.04□□□□□ -0.96
TCF4-203ENST00000398339 USP17L1Q7RTZ2 530 aa9.04□□□□□ -0.96
TCF4-203ENST00000398339 FBXO33Q7Z6M2 555 aa9.04□□□□□ -0.96
TCF4-203ENST00000398339 FAM228AQ86W67 206 aa9.04□□□□□ -0.96
TCF4-203ENST00000398339 CCDC26Q8TAB7 109 aa9.04□□□□□ -0.96
TCF4-203ENST00000398339 MAGEC3Q8TD91 643 aa9.04□□□□□ -0.96
TCF4-203ENST00000398339 TBCKQ8TEA7 893 aa9.04□□□□□ -0.96
TCF4-203ENST00000398339 RAPGEF5Q92565 580 aa9.04□□□□□ -0.96
TCF4-203ENST00000398339 RAD54LQ92698 747 aa9.04□□□□□ -0.96
TCF4-203ENST00000398339 DYNLL2Q96FJ2 89 aa9.04□□□□□ -0.96
TCF4-203ENST00000398339 CDK5RAP3Q96JB5 506 aa9.04□□□□□ -0.96
TCF4-203ENST00000398339 MTMR9Q96QG7 549 aa9.04□□□□□ -0.96
TCF4-203ENST00000398339 HAUS2Q9NVX0 235 aa9.04□□□□□ -0.96
TCF4-203ENST00000398339 AIPL1Q9NZN9 384 aa9.04□□□□□ -0.96
TCF4-203ENST00000398339 ADAMTS1Q9UHI8 967 aa9.04□□□□□ -0.96
TCF4-203ENST00000398339 FBXL5Q9UKA1 691 aa9.04□□□□□ -0.96
TCF4-203ENST00000398339 MTMR7Q9Y216 660 aa9.04□□□□□ -0.96
TCF4-203ENST00000398339 NIP7Q9Y221 180 aaKnown RBP eCLIP9.04□□□□□ -0.96
TCF4-203ENST00000398339 PCDHGA4Q9Y5G9 962 aa9.04□□□□□ -0.96
TCF4-203ENST00000398339 SCN7AQ01118 1682 aa9.03□□□□□ -0.96
TCF4-203ENST00000398339 TRAF5O00463 557 aa9.03□□□□□ -0.96
TCF4-203ENST00000398339 CEP104O60308 925 aa9.03□□□□□ -0.96
TCF4-203ENST00000398339 GOLGA8HP0CJ92 632 aa9.03□□□□□ -0.96
TCF4-203ENST00000398339 GNA11P29992 359 aa9.03□□□□□ -0.96
TCF4-203ENST00000398339 SCTRP47872 440 aa9.03□□□□□ -0.96
TCF4-203ENST00000398339 FXR2P51116 673 aaKnown RBP eCLIP9.03□□□□□ -0.96
TCF4-203ENST00000398339 ARID5AQ03989 594 aa9.03□□□□□ -0.96
TCF4-203ENST00000398339 MTMR3Q13615 1198 aa9.03□□□□□ -0.96
TCF4-203ENST00000398339 ASIC2Q16515 512 aa9.03□□□□□ -0.96
TCF4-203ENST00000398339 ODF2Q5BJF6 829 aa9.03□□□□□ -0.96
TCF4-203ENST00000398339 INTS5Q6P9B9 1019 aaKnown RBP9.03□□□□□ -0.96
TCF4-203ENST00000398339 ARMC9Q7Z3E5 817 aa9.03□□□□□ -0.96
TCF4-203ENST00000398339 MYOCDQ8IZQ8 938 aa9.03□□□□□ -0.96
TCF4-203ENST00000398339 CACNA2D3Q8IZS8 1091 aa9.03□□□□□ -0.96
TCF4-203ENST00000398339 DDX12PQ92771 950 aa9.03□□□□□ -0.96
TCF4-203ENST00000398339 SPZ1Q9BXG8 430 aa9.03□□□□□ -0.96
TCF4-203ENST00000398339 GOPCQ9HD26 462 aa9.03□□□□□ -0.96
TCF4-203ENST00000398339 ODF2LQ9ULJ1 636 aa9.03□□□□□ -0.96
TCF4-203ENST00000398339 KLRF2D3W0D1 207 aa9.03□□□□□ -0.96
TCF4-203ENST00000398339 SETSIPP0DME0 302 aa9.03□□□□□ -0.96
TCF4-203ENST00000398339 PRDX5P30044 214 aa9.03□□□□□ -0.96
TCF4-203ENST00000398339 FLT3P36888 993 aa9.03□□□□□ -0.96
TCF4-203ENST00000398339 CALCRLQ16602 461 aa9.03□□□□□ -0.96
TCF4-203ENST00000398339 BRINP3Q76B58 766 aa9.03□□□□□ -0.96
TCF4-203ENST00000398339 TAX1BP1Q86VP1 789 aa9.03□□□□□ -0.96
TCF4-203ENST00000398339 FAM133AQ8N9E0 248 aa9.03□□□□□ -0.96
TCF4-203ENST00000398339 UBLCP1Q8WVY7 318 aaPredicted RBP9.03□□□□□ -0.96
TCF4-203ENST00000398339 P3H4Q92791 437 aa9.03□□□□□ -0.96
TCF4-203ENST00000398339 MIEF2Q96C03 454 aa9.03□□□□□ -0.96
TCF4-203ENST00000398339 CEP63Q96MT8 703 aa9.03□□□□□ -0.96
TCF4-203ENST00000398339 TMEM47Q9BQJ4 181 aa9.03□□□□□ -0.96
TCF4-203ENST00000398339 LRRC27Q9C0I9 530 aa9.03□□□□□ -0.96
TCF4-203ENST00000398339 CPVLQ9H3G5 476 aa9.03□□□□□ -0.96
TCF4-203ENST00000398339 SLC24A3Q9HC58 644 aa9.03□□□□□ -0.96
TCF4-203ENST00000398339 CPSF2Q9P2I0 782 aaKnown RBP9.03□□□□□ -0.96
TCF4-203ENST00000398339 TPX2Q9ULW0 747 aaKnown RBP9.03□□□□□ -0.96
TCF4-203ENST00000398339 MINPP1Q9UNW1 487 aa9.03□□□□□ -0.96
TCF4-203ENST00000398339 NOVA2Q9UNW9 492 aaKnown RBP9.03□□□□□ -0.96
TCF4-203ENST00000398339 PGRMC1O00264 195 aaKnown RBP9.02□□□□□ -0.97
TCF4-203ENST00000398339 BACH1O14867 736 aa9.02□□□□□ -0.97
TCF4-203ENST00000398339 SART1O43290 800 aaKnown RBP9.02□□□□□ -0.97
TCF4-203ENST00000398339 NEBLO76041 1014 aa9.02□□□□□ -0.97
TCF4-203ENST00000398339 TSPY3P0CV98 308 aa9.02□□□□□ -0.97
TCF4-203ENST00000398339 TSPY8P0CW00 308 aa9.02□□□□□ -0.97
TCF4-203ENST00000398339 ZBTB48P10074 688 aaPredicted RBP9.02□□□□□ -0.97
TCF4-203ENST00000398339 KLRK1P26718 216 aa9.02□□□□□ -0.97
TCF4-203ENST00000398339 XRCC4Q13426 336 aa9.02□□□□□ -0.97
TCF4-203ENST00000398339 ENOX2Q16206 610 aaKnown RBP9.02□□□□□ -0.97
TCF4-203ENST00000398339 TMEM266Q2M3C6 531 aa9.02□□□□□ -0.97
TCF4-203ENST00000398339 TMEM119Q4V9L6 283 aa9.02□□□□□ -0.97
TCF4-203ENST00000398339 C10orf76Q5T2E6 689 aa9.02□□□□□ -0.97
TCF4-203ENST00000398339 SOGA3Q5TF21 947 aa9.02□□□□□ -0.97
TCF4-203ENST00000398339 TRIM59Q8IWR1 403 aa9.02□□□□□ -0.97
TCF4-203ENST00000398339 LRRC57Q8N9N7 239 aa9.02□□□□□ -0.97
TCF4-203ENST00000398339 N4BP2L2Q92802 583 aaPredicted RBP9.02□□□□□ -0.97
TCF4-203ENST00000398339 ARPC5LQ9BPX5 153 aa9.02□□□□□ -0.97
TCF4-203ENST00000398339 AP1M1Q9BXS5 423 aa9.02□□□□□ -0.97
TCF4-203ENST00000398339 GANQ9H2C0 597 aa9.02□□□□□ -0.97
TCF4-203ENST00000398339 MKNK2Q9HBH9 465 aa9.02□□□□□ -0.97
TCF4-203ENST00000398339 CCDC87Q9NVE4 849 aa9.02□□□□□ -0.97
TCF4-203ENST00000398339 PHLPP1O60346 1717 aa9.02□□□□□ -0.97
TCF4-203ENST00000398339 GNA14O95837 355 aa9.02□□□□□ -0.97
TCF4-203ENST00000398339 SSBP05455 408 aaKnown RBP eCLIP9.02□□□□□ -0.97
TCF4-203ENST00000398339 GHRP10912 638 aa9.02□□□□□ -0.97
TCF4-203ENST00000398339 DRD4P21917 467 aa9.02□□□□□ -0.97
TCF4-203ENST00000398339 RHBDL3P58872 404 aa9.02□□□□□ -0.97
TCF4-203ENST00000398339 MAGOHP61326 146 aaKnown RBP9.02□□□□□ -0.97
TCF4-203ENST00000398339 IFFO1Q0D2I5 559 aa9.02□□□□□ -0.97
TCF4-203ENST00000398339 COASYQ13057 564 aa9.02□□□□□ -0.97
TCF4-203ENST00000398339 TBC1D25Q3MII6 688 aa9.02□□□□□ -0.97
TCF4-203ENST00000398339 GKAP1Q5VSY0 366 aaPredicted RBP9.02□□□□□ -0.97
TCF4-203ENST00000398339 C3orf67Q6ZVT6 689 aa9.02□□□□□ -0.97
TCF4-203ENST00000398339 KCNK18Q7Z418 384 aa9.02□□□□□ -0.97
TCF4-203ENST00000398339 CEP57Q86XR8 500 aa9.02□□□□□ -0.97
TCF4-203ENST00000398339 SNX29Q8TEQ0 813 aa9.02□□□□□ -0.97
TCF4-203ENST00000398339 CCT6BQ92526 530 aa9.02□□□□□ -0.97
TCF4-203ENST00000398339 MAGOHBQ96A72 148 aaKnown RBP9.02□□□□□ -0.97
TCF4-203ENST00000398339 NUDT12Q9BQG2 462 aa9.02□□□□□ -0.97
TCF4-203ENST00000398339 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms