RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.13□□□□□ -0.79
CAPN3-208ENST00000397204 C17orf80Q9BSJ5 609 aa10.13□□□□□ -0.79
CAPN3-208ENST00000397204 TRIOO75962 3097 aa10.12□□□□□ -0.79
CAPN3-208ENST00000397204 NOP56O00567 594 aaKnown RBP10.12□□□□□ -0.79
CAPN3-208ENST00000397204 TREHO43280 583 aa10.12□□□□□ -0.79
CAPN3-208ENST00000397204 NCK2O43639 380 aa10.12□□□□□ -0.79
CAPN3-208ENST00000397204 SORBS3O60504 671 aa10.12□□□□□ -0.79
CAPN3-208ENST00000397204 LGALS2P05162 132 aa10.12□□□□□ -0.79
CAPN3-208ENST00000397204 SMIM10L2AP0DMW4 78 aa10.12□□□□□ -0.79
CAPN3-208ENST00000397204 SMIM10L2BP0DMW5 78 aa10.12□□□□□ -0.79
CAPN3-208ENST00000397204 ALADP13716 330 aa10.12□□□□□ -0.79
CAPN3-208ENST00000397204 MRPS9P82933 396 aaKnown RBP10.12□□□□□ -0.79
CAPN3-208ENST00000397204 FAM26DQ5JW98 314 aa10.12□□□□□ -0.79
CAPN3-208ENST00000397204 PTCRAQ6ISU1 281 aaPredicted RBP10.12□□□□□ -0.79
CAPN3-208ENST00000397204 XRRA1Q6P2D8 792 aa10.12□□□□□ -0.79
CAPN3-208ENST00000397204 METTL7BQ6UX53 244 aa10.12□□□□□ -0.79
CAPN3-208ENST00000397204 CYB5R4Q7L1T6 521 aa10.12□□□□□ -0.79
CAPN3-208ENST00000397204 FCHSD1Q86WN1 690 aa10.12□□□□□ -0.79
CAPN3-208ENST00000397204 IL31RAQ8NI17 732 aa10.12□□□□□ -0.79
CAPN3-208ENST00000397204 NEK9Q8TD19 979 aa10.12□□□□□ -0.79
CAPN3-208ENST00000397204 APBB2Q92870 758 aa10.12□□□□□ -0.79
CAPN3-208ENST00000397204 INPP4AQ96PE3 977 aaPredicted RBP10.12□□□□□ -0.79
CAPN3-208ENST00000397204 PIGSQ96S52 555 aa10.12□□□□□ -0.79
CAPN3-208ENST00000397204 YME1L1Q96TA2 773 aa10.12□□□□□ -0.79
CAPN3-208ENST00000397204 SENP7Q9BQF6 1050 aa10.12□□□□□ -0.79
CAPN3-208ENST00000397204 C11orf16Q9NQ32 467 aa10.12□□□□□ -0.79
CAPN3-208ENST00000397204 ERICH2A1L162 156 aa10.11□□□□□ -0.79
CAPN3-208ENST00000397204 PRR33A8MZF0 331 aa10.11□□□□□ -0.79
CAPN3-208ENST00000397204 IFIT3O14879 490 aaKnown RBP10.11□□□□□ -0.79
CAPN3-208ENST00000397204 FIBPO43427 364 aa10.11□□□□□ -0.79
CAPN3-208ENST00000397204 UPP2O95045 317 aa10.11□□□□□ -0.79
CAPN3-208ENST00000397204 IGHDP01880 384 aa10.11□□□□□ -0.79
CAPN3-208ENST00000397204 GPM6BQ13491 265 aa10.11□□□□□ -0.79
CAPN3-208ENST00000397204 GRM4Q14833 912 aa10.11□□□□□ -0.79
CAPN3-208ENST00000397204 TIGD5Q53EQ6 642 aa10.11□□□□□ -0.79
CAPN3-208ENST00000397204 CYFIP1Q7L576 1253 aa10.11□□□□□ -0.79
CAPN3-208ENST00000397204 HOMER1Q86YM7 354 aa10.11□□□□□ -0.79
CAPN3-208ENST00000397204 TMEM192Q8IY95 271 aa10.11□□□□□ -0.79
CAPN3-208ENST00000397204 GIMAP8Q8ND71 665 aaPredicted RBP10.11□□□□□ -0.79
CAPN3-208ENST00000397204 BANK1Q8NDB2 785 aa10.11□□□□□ -0.79
CAPN3-208ENST00000397204 GPKOWQ92917 476 aaPredicted RBP eCLIP10.11□□□□□ -0.79
CAPN3-208ENST00000397204 PABPC5Q96DU9 382 aaKnown RBP10.11□□□□□ -0.79
CAPN3-208ENST00000397204 GPR20Q99678 358 aa10.11□□□□□ -0.79
CAPN3-208ENST00000397204 BCAS3Q9H6U6 928 aa10.11□□□□□ -0.79
CAPN3-208ENST00000397204 SETD4Q9NVD3 440 aa10.11□□□□□ -0.79
CAPN3-208ENST00000397204 FAM50BQ9Y247 325 aa10.11□□□□□ -0.79
CAPN3-208ENST00000397204 NRCAMQ92823 1304 aa10.1□□□□□ -0.79
CAPN3-208ENST00000397204 MYO7AQ13402 2215 aa10.1□□□□□ -0.79
CAPN3-208ENST00000397204 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.1□□□□□ -0.79
CAPN3-208ENST00000397204 CYTH3O43739 400 aa10.1□□□□□ -0.79
CAPN3-208ENST00000397204 RB1P06400 928 aa10.1□□□□□ -0.79
CAPN3-208ENST00000397204 SMARCA1P28370 1054 aa10.1□□□□□ -0.79
CAPN3-208ENST00000397204 SSTR3P32745 418 aaPredicted RBP10.1□□□□□ -0.79
CAPN3-208ENST00000397204 ADAM17P78536 824 aa10.1□□□□□ -0.79
CAPN3-208ENST00000397204 KCNC4Q03721 635 aa10.1□□□□□ -0.79
CAPN3-208ENST00000397204 TROAPQ12815 778 aa10.1□□□□□ -0.79
CAPN3-208ENST00000397204 COL19A1Q14993 1142 aa10.1□□□□□ -0.79
CAPN3-208ENST00000397204 SART3Q15020 963 aaKnown RBP10.1□□□□□ -0.79
CAPN3-208ENST00000397204 SLC35G1Q2M3R5 365 aa10.1□□□□□ -0.79
CAPN3-208ENST00000397204 RPAINQ86UA6 219 aa10.1□□□□□ -0.79
CAPN3-208ENST00000397204 IL17RAQ96F46 866 aa10.1□□□□□ -0.79
CAPN3-208ENST00000397204 IFIH1Q9BYX4 1025 aaKnown RBP10.1□□□□□ -0.79
CAPN3-208ENST00000397204 PRKAG3Q9UGI9 489 aa10.1□□□□□ -0.79
CAPN3-208ENST00000397204 ZNF215Q9UL58 517 aaPredicted RBP10.1□□□□□ -0.79
CAPN3-208ENST00000397204 TANC1Q9C0D5 1861 aa10.1□□□□□ -0.79
CAPN3-208ENST00000397204 FRMPD4Q14CM0 1322 aa10.09□□□□□ -0.79
CAPN3-208ENST00000397204 KIAA1217Q5T5P2 1943 aa10.09□□□□□ -0.79
CAPN3-208ENST00000397204 CYP21A2P08686 494 aa10.09□□□□□ -0.79
CAPN3-208ENST00000397204 CTSHP09668 335 aa10.09□□□□□ -0.79
CAPN3-208ENST00000397204 IL9P15248 144 aa10.09□□□□□ -0.79
CAPN3-208ENST00000397204 WTAPQ15007 396 aa10.09□□□□□ -0.79
CAPN3-208ENST00000397204 PCNX4Q63HM2 1172 aa10.09□□□□□ -0.79
CAPN3-208ENST00000397204 TAF2Q6P1X5 1199 aa10.09□□□□□ -0.79
CAPN3-208ENST00000397204 CATIPQ7Z7H3 387 aa10.09□□□□□ -0.79
CAPN3-208ENST00000397204 FIBCD1Q8N539 461 aa10.09□□□□□ -0.79
CAPN3-208ENST00000397204 RUFY2Q8WXA3 655 aa10.09□□□□□ -0.79
CAPN3-208ENST00000397204 CUL5Q93034 780 aa10.09□□□□□ -0.79
CAPN3-208ENST00000397204 MAP3K14Q99558 947 aa10.09□□□□□ -0.79
CAPN3-208ENST00000397204 MTRQ99707 1265 aa10.09□□□□□ -0.79
CAPN3-208ENST00000397204 OSBPL7Q9BZF2 842 aa10.09□□□□□ -0.79
CAPN3-208ENST00000397204 LMAN2LQ9H0V9 348 aa10.09□□□□□ -0.79
CAPN3-208ENST00000397204 NSUN3Q9H649 340 aaKnown RBP10.09□□□□□ -0.79
CAPN3-208ENST00000397204 EHMT1Q9H9B1 1298 aa10.09□□□□□ -0.79
CAPN3-208ENST00000397204 RTEL1Q9NZ71 1219 aa10.09□□□□□ -0.79
CAPN3-208ENST00000397204 FAM86C2PA6NEL3 165 aa10.08□□□□□ -0.8
CAPN3-208ENST00000397204 C5orf67F2Z3F1 127 aa10.08□□□□□ -0.8
CAPN3-208ENST00000397204 H3BQ06 376 aaPredicted RBP10.08□□□□□ -0.8
CAPN3-208ENST00000397204 PIK3CDO00329 1044 aa10.08□□□□□ -0.8
CAPN3-208ENST00000397204 ENPP3O14638 875 aa10.08□□□□□ -0.8
CAPN3-208ENST00000397204 MAFGO15525 162 aa10.08□□□□□ -0.8
CAPN3-208ENST00000397204 CHRNA1P02708 482 aa10.08□□□□□ -0.8
CAPN3-208ENST00000397204 BMPR1AP36894 532 aa10.08□□□□□ -0.8
CAPN3-208ENST00000397204 ARHGAP4P98171 946 aa10.08□□□□□ -0.8
CAPN3-208ENST00000397204 SEMA3FQ13275 785 aa10.08□□□□□ -0.8
CAPN3-208ENST00000397204 TCEAL5Q5H9L2 206 aa10.08□□□□□ -0.8
CAPN3-208ENST00000397204 UTP14CQ5TAP6 766 aaKnown RBP10.08□□□□□ -0.8
CAPN3-208ENST00000397204 RALYLQ86SE5 291 aaKnown RBP10.08□□□□□ -0.8
CAPN3-208ENST00000397204 RSPH3Q86UC2 560 aa10.08□□□□□ -0.8
CAPN3-208ENST00000397204 NLRX1Q86UT6 975 aa10.08□□□□□ -0.8
CAPN3-208ENST00000397204 NCOA7Q8NI08 942 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms