RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 SNX17Q15036 470 aa18.47■□□□□ 0.55
AP1S3-202ENST00000396653 SLC39A14Q15043 492 aa18.47■□□□□ 0.55
AP1S3-202ENST00000396653 C1orf53Q5VUE5 145 aa18.47■□□□□ 0.55
AP1S3-202ENST00000396653 NCAPH2Q6IBW4 605 aa18.47■□□□□ 0.55
AP1S3-202ENST00000396653 TRIM50Q86XT4 487 aa18.47■□□□□ 0.55
AP1S3-202ENST00000396653 IGSF22Q8N9C0 903 aa18.47■□□□□ 0.55
AP1S3-202ENST00000396653 FERMT2Q96AC1 680 aa18.47■□□□□ 0.55
AP1S3-202ENST00000396653 SENP6Q9GZR1 1112 aaPredicted RBP18.47■□□□□ 0.55
AP1S3-202ENST00000396653 TUT1Q9H6E5 874 aaKnown RBP18.47■□□□□ 0.55
AP1S3-202ENST00000396653 ZNF302Q9NR11 478 aa18.47■□□□□ 0.55
AP1S3-202ENST00000396653 MAFBQ9Y5Q3 323 aaPredicted RBP18.47■□□□□ 0.55
AP1S3-202ENST00000396653 STK24Q9Y6E0 443 aa18.47■□□□□ 0.55
AP1S3-202ENST00000396653 POTEMA6NI47 508 aa18.46■□□□□ 0.55
AP1S3-202ENST00000396653 BACH1O14867 736 aa18.46■□□□□ 0.55
AP1S3-202ENST00000396653 DKC1O60832 514 aaKnown RBP eCLIP18.46■□□□□ 0.55
AP1S3-202ENST00000396653 TECP42680 631 aa18.46■□□□□ 0.55
AP1S3-202ENST00000396653 PTPN11Q06124 597 aaPredicted RBP18.46■□□□□ 0.55
AP1S3-202ENST00000396653 MFSD10Q14728 455 aa18.46■□□□□ 0.55
AP1S3-202ENST00000396653 SESTD1Q86VW0 696 aa18.46■□□□□ 0.55
AP1S3-202ENST00000396653 SLC43A3Q8NBI5 491 aa18.46■□□□□ 0.55
AP1S3-202ENST00000396653 LINC00301Q8NCQ3 95 aa18.46■□□□□ 0.55
AP1S3-202ENST00000396653 GLG1Q92896 1179 aa18.46■□□□□ 0.55
AP1S3-202ENST00000396653 ATP6V0A1Q93050 837 aa18.46■□□□□ 0.55
AP1S3-202ENST00000396653 ARID2Q68CP9 1835 aa18.46■□□□□ 0.55
AP1S3-202ENST00000396653 PPP6R2O75170 966 aa18.45■□□□□ 0.54
AP1S3-202ENST00000396653 P4HBP07237 508 aaKnown RBP18.45■□□□□ 0.54
AP1S3-202ENST00000396653 KRT85P78386 507 aa18.45■□□□□ 0.54
AP1S3-202ENST00000396653 DNM1Q05193 864 aaKnown RBP18.45■□□□□ 0.54
AP1S3-202ENST00000396653 ITGA7Q13683 1181 aa18.45■□□□□ 0.54
AP1S3-202ENST00000396653 STK38Q15208 465 aa18.45■□□□□ 0.54
AP1S3-202ENST00000396653 IL17AQ16552 155 aa18.45■□□□□ 0.54
AP1S3-202ENST00000396653 KIAA0753Q2KHM9 967 aa18.45■□□□□ 0.54
AP1S3-202ENST00000396653 HAUS3Q68CZ6 603 aa18.45■□□□□ 0.54
AP1S3-202ENST00000396653 SWSAP1Q6NVH7 229 aa18.45■□□□□ 0.54
AP1S3-202ENST00000396653 PDXDC2PQ6P474 469 aa18.45■□□□□ 0.54
AP1S3-202ENST00000396653 NFRKBQ6P4R8 1299 aa18.45■□□□□ 0.54
AP1S3-202ENST00000396653 SLC39A5Q6ZMH5 540 aa18.45■□□□□ 0.54
AP1S3-202ENST00000396653 ERMNQ8TAM6 284 aa18.45■□□□□ 0.54
AP1S3-202ENST00000396653 TNPO1Q92973 898 aaKnown RBP18.45■□□□□ 0.54
AP1S3-202ENST00000396653 FAM167AQ96KS9 214 aa18.45■□□□□ 0.54
AP1S3-202ENST00000396653 AK8Q96MA6 479 aa18.45■□□□□ 0.54
AP1S3-202ENST00000396653 GABBR1Q9UBS5 961 aa18.45■□□□□ 0.54
AP1S3-202ENST00000396653 MROH7Q68CQ1 1323 aa18.45■□□□□ 0.54
AP1S3-202ENST00000396653 ARVCFO00192 962 aa18.44■□□□□ 0.54
AP1S3-202ENST00000396653 MUTP22033 750 aa18.44■□□□□ 0.54
AP1S3-202ENST00000396653 PSMC5P62195 406 aa18.44■□□□□ 0.54
AP1S3-202ENST00000396653 PSMC6P62333 389 aa18.44■□□□□ 0.54
AP1S3-202ENST00000396653 CEBPZQ03701 1054 aaKnown RBP18.44■□□□□ 0.54
AP1S3-202ENST00000396653 KCNG4Q8TDN1 519 aa18.44■□□□□ 0.54
AP1S3-202ENST00000396653 VTI1AQ96AJ9 217 aa18.44■□□□□ 0.54
AP1S3-202ENST00000396653 EIF2AK1Q9BQI3 630 aaKnown RBP18.44■□□□□ 0.54
AP1S3-202ENST00000396653 TUFT1Q9NNX1 390 aa18.44■□□□□ 0.54
AP1S3-202ENST00000396653 LRWD1Q9UFC0 647 aa18.44■□□□□ 0.54
AP1S3-202ENST00000396653 SRPRBQ9Y5M8 271 aaKnown RBP18.44■□□□□ 0.54
AP1S3-202ENST00000396653 GRIN2DO15399 1336 aa18.44■□□□□ 0.54
AP1S3-202ENST00000396653 TRIP12Q14669 1992 aaPredicted RBP18.43■□□□□ 0.54
AP1S3-202ENST00000396653 VWA3AA6NCI4 1184 aa18.43■□□□□ 0.54
AP1S3-202ENST00000396653 SPTLC2O15270 562 aa18.43■□□□□ 0.54
AP1S3-202ENST00000396653 SLC26A4O43511 780 aa18.43■□□□□ 0.54
AP1S3-202ENST00000396653 LYPLA2O95372 231 aa18.43■□□□□ 0.54
AP1S3-202ENST00000396653 LONP1P36776 959 aaKnown RBP18.43■□□□□ 0.54
AP1S3-202ENST00000396653 QARSP47897 775 aaKnown RBP18.43■□□□□ 0.54
AP1S3-202ENST00000396653 CDK7P50613 346 aa18.43■□□□□ 0.54
AP1S3-202ENST00000396653 PLCB4Q15147 1175 aa18.43■□□□□ 0.54
AP1S3-202ENST00000396653 NBPF20Q3BBV1 942 aa18.43■□□□□ 0.54
AP1S3-202ENST00000396653 FOXD4L6Q3SYB3 417 aaPredicted RBP18.43■□□□□ 0.54
AP1S3-202ENST00000396653 FOXD4L3Q6VB84 417 aaPredicted RBP18.43■□□□□ 0.54
AP1S3-202ENST00000396653 ATP8B4Q8TF62 1192 aa18.43■□□□□ 0.54
AP1S3-202ENST00000396653 HSD17B14Q9BPX1 270 aa18.43■□□□□ 0.54
AP1S3-202ENST00000396653 LXNQ9BS40 222 aa18.43■□□□□ 0.54
AP1S3-202ENST00000396653 POLR3CQ9BUI4 534 aaPredicted RBP18.43■□□□□ 0.54
AP1S3-202ENST00000396653 TFIP11Q9UBB9 837 aaKnown RBP18.43■□□□□ 0.54
AP1S3-202ENST00000396653 FBXO2Q9UK22 296 aaPredicted RBP18.43■□□□□ 0.54
AP1S3-202ENST00000396653 COL1A2P08123 1366 aa18.42■□□□□ 0.54
AP1S3-202ENST00000396653 ZNF862O60290 1169 aa18.42■□□□□ 0.54
AP1S3-202ENST00000396653 HBP1O60381 514 aa18.42■□□□□ 0.54
AP1S3-202ENST00000396653 RPA1P27694 616 aa18.42■□□□□ 0.54
AP1S3-202ENST00000396653 HOXC8P31273 242 aa18.42■□□□□ 0.54
AP1S3-202ENST00000396653 PRKCEQ02156 737 aa18.42■□□□□ 0.54
AP1S3-202ENST00000396653 UGCGQ16739 394 aa18.42■□□□□ 0.54
AP1S3-202ENST00000396653 C4orf19Q8IY42 314 aa18.42■□□□□ 0.54
AP1S3-202ENST00000396653 C7orf31Q8N865 590 aa18.42■□□□□ 0.54
AP1S3-202ENST00000396653 KRI1Q8N9T8 703 aaKnown RBP18.42■□□□□ 0.54
AP1S3-202ENST00000396653 BBXQ8WY36 941 aaPredicted RBP18.42■□□□□ 0.54
AP1S3-202ENST00000396653 DYDC2Q96IM9 177 aa18.42■□□□□ 0.54
AP1S3-202ENST00000396653 HTATIP2Q9BUP3 242 aa18.42■□□□□ 0.54
AP1S3-202ENST00000396653 ZSWIM4Q9H7M6 989 aa18.42■□□□□ 0.54
AP1S3-202ENST00000396653 GTF2IRD1Q9UHL9 959 aa18.42■□□□□ 0.54
AP1S3-202ENST00000396653 POTEB3A0JP26 581 aa18.41■□□□□ 0.54
AP1S3-202ENST00000396653 SLITRK3O94933 977 aa18.41■□□□□ 0.54
AP1S3-202ENST00000396653 OATP04181 439 aa18.41■□□□□ 0.54
AP1S3-202ENST00000396653 SMIM10L2AP0DMW4 78 aa18.41■□□□□ 0.54
AP1S3-202ENST00000396653 SMIM10L2BP0DMW5 78 aa18.41■□□□□ 0.54
AP1S3-202ENST00000396653 ATP4AP20648 1035 aa18.41■□□□□ 0.54
AP1S3-202ENST00000396653 MARK3P27448 753 aa18.41■□□□□ 0.54
AP1S3-202ENST00000396653 MARCKSP29966 332 aaPredicted RBP18.41■□□□□ 0.54
AP1S3-202ENST00000396653 XKR3Q5GH77 459 aa18.41■□□□□ 0.54
AP1S3-202ENST00000396653 KRT79Q5XKE5 535 aa18.41■□□□□ 0.54
AP1S3-202ENST00000396653 POTEBQ6S5H4 581 aa18.41■□□□□ 0.54
AP1S3-202ENST00000396653 ANKRD33Q7Z3H0 272 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms