RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 TRIM50Q86XT4 487 aa9.78□□□□□ -0.84
SCFD1-202ENST00000396629 RPGRIP1Q96KN7 1286 aa9.78□□□□□ -0.84
SCFD1-202ENST00000396629 TELO2Q9Y4R8 837 aa9.78□□□□□ -0.84
SCFD1-202ENST00000396629 PCDHB15Q9Y5E8 787 aa9.78□□□□□ -0.84
SCFD1-202ENST00000396629 CACNA1HO95180 2353 aa9.77□□□□□ -0.85
SCFD1-202ENST00000396629 TRIM6-TRIM34B2RNG4 842 aa9.77□□□□□ -0.85
SCFD1-202ENST00000396629 ZNF213O14771 459 aa9.77□□□□□ -0.85
SCFD1-202ENST00000396629 UTP14CQ5TAP6 766 aaKnown RBP9.77□□□□□ -0.85
SCFD1-202ENST00000396629 ASCL5Q7RTU5 278 aa9.77□□□□□ -0.85
SCFD1-202ENST00000396629 RBM23Q86U06 439 aaKnown RBP9.77□□□□□ -0.85
SCFD1-202ENST00000396629 RSPH3Q86UC2 560 aa9.77□□□□□ -0.85
SCFD1-202ENST00000396629 NPAS4Q8IUM7 802 aa9.77□□□□□ -0.85
SCFD1-202ENST00000396629 RIPOR3Q96MK2 946 aa9.77□□□□□ -0.85
SCFD1-202ENST00000396629 ZSWIM5Q9P217 1185 aa9.77□□□□□ -0.85
SCFD1-202ENST00000396629 SQORQ9Y6N5 450 aa9.77□□□□□ -0.85
SCFD1-202ENST00000396629 ZFHX2Q9C0A1 2572 aaPredicted RBP9.77□□□□□ -0.85
SCFD1-202ENST00000396629 MBLAC1A4D2B0 266 aaPredicted RBP9.77□□□□□ -0.85
SCFD1-202ENST00000396629 B4E1Z4 1266 aa9.77□□□□□ -0.85
SCFD1-202ENST00000396629 KLRF2D3W0D1 207 aa9.77□□□□□ -0.85
SCFD1-202ENST00000396629 H0Y858 1186 aa9.77□□□□□ -0.85
SCFD1-202ENST00000396629 FIBPO43427 364 aa9.77□□□□□ -0.85
SCFD1-202ENST00000396629 GALR2O43603 387 aaPredicted RBP9.77□□□□□ -0.85
SCFD1-202ENST00000396629 PDE1AP54750 535 aa9.77□□□□□ -0.85
SCFD1-202ENST00000396629 FCHSD1Q86WN1 690 aa9.77□□□□□ -0.85
SCFD1-202ENST00000396629 SENP7Q9BQF6 1050 aa9.77□□□□□ -0.85
SCFD1-202ENST00000396629 TLE6Q9H808 572 aa9.77□□□□□ -0.85
SCFD1-202ENST00000396629 AGO3Q9H9G7 860 aaKnown RBP9.77□□□□□ -0.85
SCFD1-202ENST00000396629 TLR9Q9NR96 1032 aa9.77□□□□□ -0.85
SCFD1-202ENST00000396629 MAD2L2Q9UI95 211 aa9.77□□□□□ -0.85
SCFD1-202ENST00000396629 PCDHGC5Q9Y5F6 944 aa9.77□□□□□ -0.85
SCFD1-202ENST00000396629 CDY2AQ9Y6F7 541 aa9.77□□□□□ -0.85
SCFD1-202ENST00000396629 BAZ2BQ9UIF8 2168 aaKnown RBP9.76□□□□□ -0.85
SCFD1-202ENST00000396629 MYO10Q9HD67 2058 aa9.76□□□□□ -0.85
SCFD1-202ENST00000396629 FSD2A1L4K1 749 aa9.76□□□□□ -0.85
SCFD1-202ENST00000396629 PALM3A6NDB9 673 aaPredicted RBP9.76□□□□□ -0.85
SCFD1-202ENST00000396629 PRR23AA6NEV1 266 aa9.76□□□□□ -0.85
SCFD1-202ENST00000396629 NBL1P41271 181 aa9.76□□□□□ -0.85
SCFD1-202ENST00000396629 MFAP1P55081 439 aaKnown RBP9.76□□□□□ -0.85
SCFD1-202ENST00000396629 UBE3AQ05086 875 aa9.76□□□□□ -0.85
SCFD1-202ENST00000396629 TRAF1Q13077 416 aa9.76□□□□□ -0.85
SCFD1-202ENST00000396629 SLC35G1Q2M3R5 365 aa9.76□□□□□ -0.85
SCFD1-202ENST00000396629 ERMP1Q7Z2K6 904 aa9.76□□□□□ -0.85
SCFD1-202ENST00000396629 VN1R2Q8NFZ6 395 aa9.76□□□□□ -0.85
SCFD1-202ENST00000396629 DNAJB3Q8WWF6 145 aa9.76□□□□□ -0.85
SCFD1-202ENST00000396629 CDCA3Q99618 268 aaPredicted RBP9.76□□□□□ -0.85
SCFD1-202ENST00000396629 FTHL17Q9BXU8 183 aa9.76□□□□□ -0.85
SCFD1-202ENST00000396629 S1PR5Q9H228 398 aa9.76□□□□□ -0.85
SCFD1-202ENST00000396629 SPTBN4Q9H254 2564 aa9.75□□□□□ -0.85
SCFD1-202ENST00000396629 PDGFBP01127 241 aaPredicted RBP9.75□□□□□ -0.85
SCFD1-202ENST00000396629 STAG3L1P0CL83 205 aa9.75□□□□□ -0.85
SCFD1-202ENST00000396629 CD52P31358 61 aa9.75□□□□□ -0.85
SCFD1-202ENST00000396629 MRPS6P82932 125 aaKnown RBP9.75□□□□□ -0.85
SCFD1-202ENST00000396629 KCNC3Q14003 757 aa9.75□□□□□ -0.85
SCFD1-202ENST00000396629 DUSP6Q16828 381 aa9.75□□□□□ -0.85
SCFD1-202ENST00000396629 PAN2Q504Q3 1202 aaKnown RBP9.75□□□□□ -0.85
SCFD1-202ENST00000396629 MARCH8Q5T0T0 291 aa9.75□□□□□ -0.85
SCFD1-202ENST00000396629 TMEM184AQ6ZMB5 413 aa9.75□□□□□ -0.85
SCFD1-202ENST00000396629 RIOX1Q9H6W3 641 aa9.75□□□□□ -0.85
SCFD1-202ENST00000396629 PER2O15055 1255 aa9.75□□□□□ -0.85
SCFD1-202ENST00000396629 RPLP2P05387 115 aaKnown RBP9.75□□□□□ -0.85
SCFD1-202ENST00000396629 RBM10P98175 930 aaKnown RBP9.75□□□□□ -0.85
SCFD1-202ENST00000396629 PPFIA1Q13136 1202 aa9.75□□□□□ -0.85
SCFD1-202ENST00000396629 SEC23AQ15436 765 aa9.75□□□□□ -0.85
SCFD1-202ENST00000396629 GRIK4Q16099 956 aa9.75□□□□□ -0.85
SCFD1-202ENST00000396629 NEK1Q96PY6 1258 aa9.75□□□□□ -0.85
SCFD1-202ENST00000396629 RTEL1Q9NZ71 1219 aa9.75□□□□□ -0.85
SCFD1-202ENST00000396629 TUBE1Q9UJT0 475 aa9.75□□□□□ -0.85
SCFD1-202ENST00000396629 TRPC6Q9Y210 931 aa9.75□□□□□ -0.85
SCFD1-202ENST00000396629 FSCN2O14926 492 aa9.74□□□□□ -0.85
SCFD1-202ENST00000396629 TCF7P36402 384 aaPredicted RBP9.74□□□□□ -0.85
SCFD1-202ENST00000396629 GATMP50440 423 aa9.74□□□□□ -0.85
SCFD1-202ENST00000396629 IFIT1BQ5T764 474 aaKnown RBP9.74□□□□□ -0.85
SCFD1-202ENST00000396629 ANKRD45Q5TZF3 282 aa9.74□□□□□ -0.85
SCFD1-202ENST00000396629 PDE12Q6L8Q7 609 aaKnown RBP9.74□□□□□ -0.85
SCFD1-202ENST00000396629 XRRA1Q6P2D8 792 aa9.74□□□□□ -0.85
SCFD1-202ENST00000396629 GIMAP8Q8ND71 665 aaPredicted RBP9.74□□□□□ -0.85
SCFD1-202ENST00000396629 PIGSQ96S52 555 aa9.74□□□□□ -0.85
SCFD1-202ENST00000396629 KRT23Q9C075 422 aa9.74□□□□□ -0.85
SCFD1-202ENST00000396629 PADI3Q9ULW8 664 aa9.74□□□□□ -0.85
SCFD1-202ENST00000396629 PNMA6FA0A0J9YX94 578 aa9.73□□□□□ -0.85
SCFD1-202ENST00000396629 GSTTP1A0A1W2PQM5 241 aa9.73□□□□□ -0.85
SCFD1-202ENST00000396629 SCG2P13521 617 aa9.73□□□□□ -0.85
SCFD1-202ENST00000396629 ERVFC1P60507 584 aa9.73□□□□□ -0.85
SCFD1-202ENST00000396629 IER5Q5VY09 327 aa9.73□□□□□ -0.85
SCFD1-202ENST00000396629 PCNX4Q63HM2 1172 aa9.73□□□□□ -0.85
SCFD1-202ENST00000396629 ANKRD54Q6NXT1 300 aa9.73□□□□□ -0.85
SCFD1-202ENST00000396629 FAM43BQ6ZT52 329 aaPredicted RBP9.73□□□□□ -0.85
SCFD1-202ENST00000396629 HOMER1Q86YM7 354 aa9.73□□□□□ -0.85
SCFD1-202ENST00000396629 RASGRP4Q8TDF6 673 aa9.73□□□□□ -0.85
SCFD1-202ENST00000396629 MICAL1Q8TDZ2 1067 aa9.73□□□□□ -0.85
SCFD1-202ENST00000396629 SEPT1Q8WYJ6 367 aa9.73□□□□□ -0.85
SCFD1-202ENST00000396629 ERAP1Q9NZ08 941 aa9.73□□□□□ -0.85
SCFD1-202ENST00000396629 PCDHB12Q9Y5F1 795 aa9.73□□□□□ -0.85
SCFD1-202ENST00000396629 TRPV2Q9Y5S1 764 aa9.73□□□□□ -0.85
SCFD1-202ENST00000396629 PTPRZ1P23471 2315 aaPredicted RBP9.73□□□□□ -0.85
SCFD1-202ENST00000396629 RRN3P2A6NIE6 340 aa9.73□□□□□ -0.85
SCFD1-202ENST00000396629 CYTH3O43739 400 aa9.73□□□□□ -0.85
SCFD1-202ENST00000396629 PPFIA3O75145 1194 aa9.73□□□□□ -0.85
SCFD1-202ENST00000396629 SDSP20132 328 aa9.73□□□□□ -0.85
SCFD1-202ENST00000396629 SP4Q02446 784 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms