RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 SUGCTQ9HAC7 445 aa11.07□□□□□ -0.64
COL4A4-201ENST00000396625 USE1Q9NZ43 259 aa11.07□□□□□ -0.64
COL4A4-201ENST00000396625 ZFYVE9O95405 1425 aa11.07□□□□□ -0.64
COL4A4-201ENST00000396625 KRT37O76014 449 aa11.07□□□□□ -0.64
COL4A4-201ENST00000396625 CLCN6P51797 869 aa11.07□□□□□ -0.64
COL4A4-201ENST00000396625 TLK2Q86UE8 772 aa11.07□□□□□ -0.64
COL4A4-201ENST00000396625 TTC17Q96AE7 1141 aa11.07□□□□□ -0.64
COL4A4-201ENST00000396625 STK17AQ9UEE5 414 aa11.07□□□□□ -0.64
COL4A4-201ENST00000396625 RAD23BP54727 409 aa11.07□□□□□ -0.64
COL4A4-201ENST00000396625 DEFA1P59665 94 aa11.07□□□□□ -0.64
COL4A4-201ENST00000396625 DEFA3P59666 94 aa11.07□□□□□ -0.64
COL4A4-201ENST00000396625 CASP8Q14790 479 aa11.07□□□□□ -0.64
COL4A4-201ENST00000396625 TEKT4Q8WW24 435 aa11.07□□□□□ -0.64
COL4A4-201ENST00000396625 VPS39Q96JC1 886 aa11.07□□□□□ -0.64
COL4A4-201ENST00000396625 GID8Q9NWU2 228 aa11.07□□□□□ -0.64
COL4A4-201ENST00000396625 PCDHA12Q9UN75 941 aa11.07□□□□□ -0.64
COL4A4-201ENST00000396625 COPEO14579 308 aa11.07□□□□□ -0.64
COL4A4-201ENST00000396625 ZBED1O96006 694 aa11.07□□□□□ -0.64
COL4A4-201ENST00000396625 KRT7P08729 469 aa11.07□□□□□ -0.64
COL4A4-201ENST00000396625 OR52Z1P0C646 297 aa11.07□□□□□ -0.64
COL4A4-201ENST00000396625 TCP10Q12799 353 aa11.07□□□□□ -0.64
COL4A4-201ENST00000396625 MYO1EQ12965 1108 aa11.07□□□□□ -0.64
COL4A4-201ENST00000396625 ZNF827Q17R98 1081 aa11.07□□□□□ -0.64
COL4A4-201ENST00000396625 SPATA1Q5VX52 437 aa11.07□□□□□ -0.64
COL4A4-201ENST00000396625 NT5C1BQ96P26 610 aa11.07□□□□□ -0.64
COL4A4-201ENST00000396625 ELAC2Q9BQ52 826 aaKnown RBP11.07□□□□□ -0.64
COL4A4-201ENST00000396625 NFU1Q9UMS0 254 aa11.07□□□□□ -0.64
COL4A4-201ENST00000396625 MYH3P11055 1940 aa11.07□□□□□ -0.64
COL4A4-201ENST00000396625 RAPGEF6Q8TEU7 1601 aa11.07□□□□□ -0.64
COL4A4-201ENST00000396625 MYO1CO00159 1063 aa11.07□□□□□ -0.64
COL4A4-201ENST00000396625 RBM6P78332 1123 aaKnown RBP11.07□□□□□ -0.64
COL4A4-201ENST00000396625 APPBP2Q92624 585 aa11.07□□□□□ -0.64
COL4A4-201ENST00000396625 SYMPKQ92797 1274 aaKnown RBP11.07□□□□□ -0.64
COL4A4-201ENST00000396625 FSD1LQ9BXM9 530 aa11.07□□□□□ -0.64
COL4A4-201ENST00000396625 EHD2Q9NZN4 543 aa11.07□□□□□ -0.64
COL4A4-201ENST00000396625 TBC1D4O60343 1298 aa11.06□□□□□ -0.64
COL4A4-201ENST00000396625 SH3GL1Q99961 368 aa11.06□□□□□ -0.64
COL4A4-201ENST00000396625 KRT39Q6A163 491 aa11.06□□□□□ -0.64
COL4A4-201ENST00000396625 CCDC103Q8IW40 242 aa11.06□□□□□ -0.64
COL4A4-201ENST00000396625 PKD2L2Q9NZM6 624 aa11.06□□□□□ -0.64
COL4A4-201ENST00000396625 GOLGA8SH3BPF8 625 aa11.06□□□□□ -0.64
COL4A4-201ENST00000396625 TCF3P15923 654 aa11.06□□□□□ -0.64
COL4A4-201ENST00000396625 ITGA6P23229 1130 aa11.06□□□□□ -0.64
COL4A4-201ENST00000396625 NDUFA8P51970 172 aa11.06□□□□□ -0.64
COL4A4-201ENST00000396625 LLGL1Q15334 1064 aa11.06□□□□□ -0.64
COL4A4-201ENST00000396625 LRRC8EQ6NSJ5 796 aa11.06□□□□□ -0.64
COL4A4-201ENST00000396625 BLIDQ8IZY5 108 aa11.06□□□□□ -0.64
COL4A4-201ENST00000396625 SLC26A7Q8TE54 656 aa11.06□□□□□ -0.64
COL4A4-201ENST00000396625 FAM161BQ96MY7 647 aa11.06□□□□□ -0.64
COL4A4-201ENST00000396625 NDEL1Q9GZM8 345 aa11.06□□□□□ -0.64
COL4A4-201ENST00000396625 SEPT3Q9UH03 358 aa11.06□□□□□ -0.64
COL4A4-201ENST00000396625 SEC24DO94855 1032 aaPredicted RBP11.06□□□□□ -0.64
COL4A4-201ENST00000396625 SMARCA1P28370 1054 aa11.06□□□□□ -0.64
COL4A4-201ENST00000396625 PDE6BP35913 854 aa11.06□□□□□ -0.64
COL4A4-201ENST00000396625 NR5A1Q13285 461 aa11.06□□□□□ -0.64
COL4A4-201ENST00000396625 THAP11Q96EK4 314 aa11.06□□□□□ -0.64
COL4A4-201ENST00000396625 XAGE2Q96GT9 111 aa11.06□□□□□ -0.64
COL4A4-201ENST00000396625 PI4K2BG5E9Z4 385 aa11.06□□□□□ -0.64
COL4A4-201ENST00000396625 ANKRD13CQ8N6S4 541 aa11.06□□□□□ -0.64
COL4A4-201ENST00000396625 SELENONQ9NZV5 590 aa11.06□□□□□ -0.64
COL4A4-201ENST00000396625 MPP6Q9NZW5 540 aa11.06□□□□□ -0.64
COL4A4-201ENST00000396625 NR2F2P24468 414 aa11.06□□□□□ -0.64
COL4A4-201ENST00000396625 COPS2P61201 443 aa11.06□□□□□ -0.64
COL4A4-201ENST00000396625 MXD4Q14582 209 aaPredicted RBP11.06□□□□□ -0.64
COL4A4-201ENST00000396625 WDR75Q8IWA0 830 aaKnown RBP11.06□□□□□ -0.64
COL4A4-201ENST00000396625 BRD8Q9H0E9 1235 aa11.06□□□□□ -0.64
COL4A4-201ENST00000396625 FRMPD2Q68DX3 1309 aaPredicted RBP11.06□□□□□ -0.64
COL4A4-201ENST00000396625 CDR2LQ86X02 465 aaPredicted RBP11.05□□□□□ -0.64
COL4A4-201ENST00000396625 NCAPG2Q86XI2 1143 aa11.05□□□□□ -0.64
COL4A4-201ENST00000396625 DDX17Q92841 729 aaKnown RBP11.05□□□□□ -0.64
COL4A4-201ENST00000396625 ABCC12Q96J65 1359 aa11.05□□□□□ -0.64
COL4A4-201ENST00000396625 STXBP3O00186 592 aa11.05□□□□□ -0.64
COL4A4-201ENST00000396625 ARL13BQ3SXY8 428 aa11.05□□□□□ -0.64
COL4A4-201ENST00000396625 RASSF3Q86WH2 238 aa11.05□□□□□ -0.64
COL4A4-201ENST00000396625 MRPL47Q9HD33 250 aaKnown RBP11.05□□□□□ -0.64
COL4A4-201ENST00000396625 RBL2Q08999 1139 aa11.05□□□□□ -0.64
COL4A4-201ENST00000396625 LBRQ14739 615 aaKnown RBP11.05□□□□□ -0.64
COL4A4-201ENST00000396625 CYTH1Q15438 398 aa11.05□□□□□ -0.64
COL4A4-201ENST00000396625 BBS9Q3SYG4 887 aa11.05□□□□□ -0.64
COL4A4-201ENST00000396625 HORMAD1Q86X24 394 aa11.05□□□□□ -0.64
COL4A4-201ENST00000396625 PI4K2BQ8TCG2 481 aa11.05□□□□□ -0.64
COL4A4-201ENST00000396625 C10orf88Q9H8K7 445 aa11.05□□□□□ -0.64
COL4A4-201ENST00000396625 DONSONQ9NYP3 566 aa11.05□□□□□ -0.64
COL4A4-201ENST00000396625 PNMA6AP0CW24 399 aaPredicted RBP11.05□□□□□ -0.64
COL4A4-201ENST00000396625 IL10P22301 178 aa11.05□□□□□ -0.64
COL4A4-201ENST00000396625 TUBGCP3Q96CW5 907 aa11.05□□□□□ -0.64
COL4A4-201ENST00000396625 EEF2KMTQ96G04 330 aa11.05□□□□□ -0.64
COL4A4-201ENST00000396625 AP1M1Q9BXS5 423 aa11.05□□□□□ -0.64
COL4A4-201ENST00000396625 FAM96AQ9H5X1 160 aa11.05□□□□□ -0.64
COL4A4-201ENST00000396625 MLXIPQ9HAP2 919 aa11.05□□□□□ -0.64
COL4A4-201ENST00000396625 SOWAHDA6NJG2 315 aa11.05□□□□□ -0.64
COL4A4-201ENST00000396625 GOLGA8RI6L899 631 aa11.05□□□□□ -0.64
COL4A4-201ENST00000396625 FTCDO95954 541 aa11.05□□□□□ -0.64
COL4A4-201ENST00000396625 TGFBRAP1Q8WUH2 860 aa11.05□□□□□ -0.64
COL4A4-201ENST00000396625 ZSCAN10Q96SZ4 725 aaPredicted RBP11.05□□□□□ -0.64
COL4A4-201ENST00000396625 GINM1Q9NU53 330 aa11.05□□□□□ -0.64
COL4A4-201ENST00000396625 DCDC2Q9UHG0 476 aa11.05□□□□□ -0.64
COL4A4-201ENST00000396625 TFAP4Q01664 338 aa11.05□□□□□ -0.64
COL4A4-201ENST00000396625 HSPH1Q92598 858 aa11.05□□□□□ -0.64
COL4A4-201ENST00000396625 GINS4Q9BRT9 223 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms