RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 TBC1D10CQ8IV04 446 aa9.15□□□□□ -0.94
NDE1-202ENST00000396355 MSL3Q8N5Y2 521 aaKnown RBP9.15□□□□□ -0.94
NDE1-202ENST00000396355 VGLL2Q8N8G2 317 aa9.15□□□□□ -0.94
NDE1-202ENST00000396355 ZNF653Q96CK0 615 aa9.15□□□□□ -0.94
NDE1-202ENST00000396355 ZIM3Q96PE6 472 aa9.15□□□□□ -0.94
NDE1-202ENST00000396355 CENPKQ9BS16 269 aa9.15□□□□□ -0.94
NDE1-202ENST00000396355 MTA3Q9BTC8 594 aa9.15□□□□□ -0.94
NDE1-202ENST00000396355 MMRN2Q9H8L6 949 aa9.15□□□□□ -0.94
NDE1-202ENST00000396355 PANK4Q9NVE7 773 aa9.15□□□□□ -0.94
NDE1-202ENST00000396355 SPDYE5A6NIY4 337 aa9.15□□□□□ -0.95
NDE1-202ENST00000396355 SPECC1L-ADORA2AF8WAN1 911 aa9.15□□□□□ -0.95
NDE1-202ENST00000396355 KRT38O76015 456 aa9.15□□□□□ -0.95
NDE1-202ENST00000396355 PDE5AO76074 875 aa9.15□□□□□ -0.95
NDE1-202ENST00000396355 TROVE2P10155 538 aaKnown RBP eCLIP9.15□□□□□ -0.95
NDE1-202ENST00000396355 IMPDH2P12268 514 aa9.15□□□□□ -0.95
NDE1-202ENST00000396355 PFKFB1P16118 471 aa9.15□□□□□ -0.95
NDE1-202ENST00000396355 RXRAP19793 462 aa9.15□□□□□ -0.95
NDE1-202ENST00000396355 ABL2P42684 1182 aa9.15□□□□□ -0.95
NDE1-202ENST00000396355 USP46P62068 366 aa9.15□□□□□ -0.95
NDE1-202ENST00000396355 TMEM62Q0P6H9 643 aa9.15□□□□□ -0.95
NDE1-202ENST00000396355 SFSWAPQ12872 951 aaKnown RBP9.15□□□□□ -0.95
NDE1-202ENST00000396355 DEFB115Q30KQ5 88 aa9.15□□□□□ -0.95
NDE1-202ENST00000396355 NUGGCQ68CJ6 796 aa9.15□□□□□ -0.95
NDE1-202ENST00000396355 OTUD6AQ7L8S5 288 aa9.15□□□□□ -0.95
NDE1-202ENST00000396355 GDAP1Q8TB36 358 aa9.15□□□□□ -0.95
NDE1-202ENST00000396355 LRRC8CQ8TDW0 803 aa9.15□□□□□ -0.95
NDE1-202ENST00000396355 WDR60Q8WVS4 1066 aa9.15□□□□□ -0.95
NDE1-202ENST00000396355 DNAJC9Q8WXX5 260 aa9.15□□□□□ -0.95
NDE1-202ENST00000396355 ATP6V0A1Q93050 837 aa9.15□□□□□ -0.95
NDE1-202ENST00000396355 PPP1R14BQ96C90 147 aa9.15□□□□□ -0.95
NDE1-202ENST00000396355 RAB3IPQ96QF0 476 aaPredicted RBP9.15□□□□□ -0.95
NDE1-202ENST00000396355 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.15□□□□□ -0.95
NDE1-202ENST00000396355 HACL1Q9UJ83 578 aa9.15□□□□□ -0.95
NDE1-202ENST00000396355 CORO1CQ9ULV4 474 aaPredicted RBP9.15□□□□□ -0.95
NDE1-202ENST00000396355 RABGAP1Q9Y3P9 1069 aa9.15□□□□□ -0.95
NDE1-202ENST00000396355 PCDHA5Q9Y5H7 936 aa9.15□□□□□ -0.95
NDE1-202ENST00000396355 ADGRG1Q9Y653 693 aa9.15□□□□□ -0.95
NDE1-202ENST00000396355 GOLGA8BA8MQT2 603 aa9.14□□□□□ -0.95
NDE1-202ENST00000396355 POLRMTO00411 1230 aaKnown RBP9.14□□□□□ -0.95
NDE1-202ENST00000396355 RGS16O15492 202 aaPredicted RBP9.14□□□□□ -0.95
NDE1-202ENST00000396355 ATP1A1P05023 1023 aaKnown RBP9.14□□□□□ -0.95
NDE1-202ENST00000396355 FUT4P22083 530 aa9.14□□□□□ -0.95
NDE1-202ENST00000396355 APPBP2Q92624 585 aa9.14□□□□□ -0.95
NDE1-202ENST00000396355 CASP10Q92851 521 aa9.14□□□□□ -0.95
NDE1-202ENST00000396355 BRIP1Q9BX63 1249 aa9.14□□□□□ -0.95
NDE1-202ENST00000396355 DNAI2Q9GZS0 605 aa9.14□□□□□ -0.95
NDE1-202ENST00000396355 A1CFQ9NQ94 594 aaKnown RBP9.14□□□□□ -0.95
NDE1-202ENST00000396355 LARSQ9P2J5 1176 aaKnown RBP9.14□□□□□ -0.95
NDE1-202ENST00000396355 LNPEPQ9UIQ6 1025 aa9.14□□□□□ -0.95
NDE1-202ENST00000396355 NUB1Q9Y5A7 615 aa9.14□□□□□ -0.95
NDE1-202ENST00000396355 MBD4O95243 580 aa9.14□□□□□ -0.95
NDE1-202ENST00000396355 PCCAP05165 728 aaPredicted RBP9.14□□□□□ -0.95
NDE1-202ENST00000396355 KRT13P13646 458 aa9.14□□□□□ -0.95
NDE1-202ENST00000396355 CDC25AP30304 524 aa9.14□□□□□ -0.95
NDE1-202ENST00000396355 GSTT1P30711 240 aa9.14□□□□□ -0.95
NDE1-202ENST00000396355 ELF3P78545 371 aaPredicted RBP9.14□□□□□ -0.95
NDE1-202ENST00000396355 CCNI2Q6ZMN8 369 aaPredicted RBP9.14□□□□□ -0.95
NDE1-202ENST00000396355 CYB5R4Q7L1T6 521 aa9.14□□□□□ -0.95
NDE1-202ENST00000396355 NCAPG2Q86XI2 1143 aa9.14□□□□□ -0.95
NDE1-202ENST00000396355 GFM2Q969S9 779 aaKnown RBP9.14□□□□□ -0.95
NDE1-202ENST00000396355 BORCS6Q96GS4 357 aa9.14□□□□□ -0.95
NDE1-202ENST00000396355 ANLNQ9NQW6 1124 aa9.14□□□□□ -0.95
NDE1-202ENST00000396355 FRMD4BQ9Y2L6 1034 aa9.14□□□□□ -0.95
NDE1-202ENST00000396355 POLR2DO15514 142 aaKnown RBP9.14□□□□□ -0.95
NDE1-202ENST00000396355 SUN1O94901 812 aa9.14□□□□□ -0.95
NDE1-202ENST00000396355 MMEP08473 750 aa9.14□□□□□ -0.95
NDE1-202ENST00000396355 MRPS9P82933 396 aaKnown RBP9.14□□□□□ -0.95
NDE1-202ENST00000396355 TBL3Q12788 808 aaKnown RBP9.14□□□□□ -0.95
NDE1-202ENST00000396355 TBC1D9BQ66K14 1250 aa9.14□□□□□ -0.95
NDE1-202ENST00000396355 APBB1IPQ7Z5R6 666 aaPredicted RBP9.14□□□□□ -0.95
NDE1-202ENST00000396355 SMYD4Q8IYR2 804 aaPredicted RBP9.14□□□□□ -0.95
NDE1-202ENST00000396355 ZBTB38Q8NAP3 1195 aaPredicted RBP9.14□□□□□ -0.95
NDE1-202ENST00000396355 SREK1Q8WXA9 508 aaKnown RBP9.14□□□□□ -0.95
NDE1-202ENST00000396355 LRRC45Q96CN5 670 aa9.14□□□□□ -0.95
NDE1-202ENST00000396355 MASTLQ96GX5 879 aa9.14□□□□□ -0.95
NDE1-202ENST00000396355 PLA2G12BQ9BX93 195 aa9.14□□□□□ -0.95
NDE1-202ENST00000396355 NLRC4Q9NPP4 1024 aa9.14□□□□□ -0.95
NDE1-202ENST00000396355 LUC7LQ9NQ29 371 aaKnown RBP9.14□□□□□ -0.95
NDE1-202ENST00000396355 DSEQ9UL01 958 aa9.14□□□□□ -0.95
NDE1-202ENST00000396355 ATP8A1Q9Y2Q0 1164 aa9.14□□□□□ -0.95
NDE1-202ENST00000396355 PCDHGC5Q9Y5F6 944 aa9.14□□□□□ -0.95
NDE1-202ENST00000396355 DOCK2Q92608 1830 aa9.14□□□□□ -0.95
NDE1-202ENST00000396355 P4HA2O15460 535 aa9.13□□□□□ -0.95
NDE1-202ENST00000396355 COQ9O75208 318 aa9.13□□□□□ -0.95
NDE1-202ENST00000396355 NAT1P18440 290 aa9.13□□□□□ -0.95
NDE1-202ENST00000396355 CYP11B2P19099 503 aa9.13□□□□□ -0.95
NDE1-202ENST00000396355 CCND1P24385 295 aa9.13□□□□□ -0.95
NDE1-202ENST00000396355 ALDH1B1P30837 517 aa9.13□□□□□ -0.95
NDE1-202ENST00000396355 DHX9Q08211 1270 aaKnown RBP9.13□□□□□ -0.95
NDE1-202ENST00000396355 TRIM28Q13263 835 aaKnown RBP9.13□□□□□ -0.95
NDE1-202ENST00000396355 RCN1Q15293 331 aa9.13□□□□□ -0.95
NDE1-202ENST00000396355 ANKRD20A8PQ5CZ79 823 aa9.13□□□□□ -0.95
NDE1-202ENST00000396355 ALS2CLQ60I27 953 aa9.13□□□□□ -0.95
NDE1-202ENST00000396355 ADALQ6DHV7 355 aa9.13□□□□□ -0.95
NDE1-202ENST00000396355 PHLDB3Q6NSJ2 640 aa9.13□□□□□ -0.95
NDE1-202ENST00000396355 HIPK4Q8NE63 616 aa9.13□□□□□ -0.95
NDE1-202ENST00000396355 TRIM47Q96LD4 638 aa9.13□□□□□ -0.95
NDE1-202ENST00000396355 RMDN2Q96LZ7 410 aa9.13□□□□□ -0.95
NDE1-202ENST00000396355 PIH1D3Q9NQM4 214 aaKnown RBP9.13□□□□□ -0.95
NDE1-202ENST00000396355 TRIM33Q9UPN9 1127 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms