RNA–Protein interactions for RNA: ENST00000395303.7

HLA-DMA-202, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-202ENST00000395303 NOD1Q9Y239 953 aa15.15■□□□□ 0.02
HLA-DMA-202ENST00000395303 TTC28Q96AY4 2481 aa15.15■□□□□ 0.02
HLA-DMA-202ENST00000395303 C17orf102A2RUQ5 167 aa15.14■□□□□ 0.01
HLA-DMA-202ENST00000395303 MSH4O15457 936 aa15.14■□□□□ 0.01
HLA-DMA-202ENST00000395303 PARNO95453 639 aaKnown RBP15.14■□□□□ 0.01
HLA-DMA-202ENST00000395303 MMP1P03956 469 aa15.14■□□□□ 0.01
HLA-DMA-202ENST00000395303 PFKMP08237 780 aa15.14■□□□□ 0.01
HLA-DMA-202ENST00000395303 IQCF3P0C7M6 154 aa15.14■□□□□ 0.01
HLA-DMA-202ENST00000395303 RFC2P35250 354 aa15.14■□□□□ 0.01
HLA-DMA-202ENST00000395303 HMGN5P82970 282 aaKnown RBP15.14■□□□□ 0.01
HLA-DMA-202ENST00000395303 ZNF200P98182 395 aaPredicted RBP15.14■□□□□ 0.01
HLA-DMA-202ENST00000395303 INF2Q27J81 1249 aa15.14■□□□□ 0.01
HLA-DMA-202ENST00000395303 KRT40Q6A162 431 aa15.14■□□□□ 0.01
HLA-DMA-202ENST00000395303 ZNF746Q6NUN9 644 aaPredicted RBP15.14■□□□□ 0.01
HLA-DMA-202ENST00000395303 PSRC1Q6PGN9 363 aaPredicted RBP15.14■□□□□ 0.01
HLA-DMA-202ENST00000395303 RPUSD2Q8IZ73 545 aaKnown RBP15.14■□□□□ 0.01
HLA-DMA-202ENST00000395303 SLC5A5Q92911 643 aa15.14■□□□□ 0.01
HLA-DMA-202ENST00000395303 SCLYQ96I15 445 aa15.14■□□□□ 0.01
HLA-DMA-202ENST00000395303 RIT2Q99578 217 aa15.14■□□□□ 0.01
HLA-DMA-202ENST00000395303 NRCAMQ92823 1304 aa15.14■□□□□ 0.01
HLA-DMA-202ENST00000395303 CCDC194A0A1B0GVG4 234 aa15.13■□□□□ 0.01
HLA-DMA-202ENST00000395303 MBLAC1A4D2B0 266 aaPredicted RBP15.13■□□□□ 0.01
HLA-DMA-202ENST00000395303 TDP2O95551 362 aa15.13■□□□□ 0.01
HLA-DMA-202ENST00000395303 GNAT1P11488 350 aa15.13■□□□□ 0.01
HLA-DMA-202ENST00000395303 CKBP12277 381 aa15.13■□□□□ 0.01
HLA-DMA-202ENST00000395303 KRT2P35908 639 aa15.13■□□□□ 0.01
HLA-DMA-202ENST00000395303 SLC26A2P50443 739 aa15.13■□□□□ 0.01
HLA-DMA-202ENST00000395303 STAT5BP51692 787 aa15.13■□□□□ 0.01
HLA-DMA-202ENST00000395303 KRT76Q01546 638 aa15.13■□□□□ 0.01
HLA-DMA-202ENST00000395303 EARS2Q5JPH6 523 aaKnown RBP15.13■□□□□ 0.01
HLA-DMA-202ENST00000395303 PPP4R3AQ6IN85 833 aa15.13■□□□□ 0.01
HLA-DMA-202ENST00000395303 TRAF7Q6Q0C0 670 aa15.13■□□□□ 0.01
HLA-DMA-202ENST00000395303 B3GNT9Q6UX72 402 aa15.13■□□□□ 0.01
HLA-DMA-202ENST00000395303 NEK8Q86SG6 692 aa15.13■□□□□ 0.01
HLA-DMA-202ENST00000395303 SMAP1Q8IYB5 467 aaPredicted RBP15.13■□□□□ 0.01
HLA-DMA-202ENST00000395303 RETREG2Q8NC44 543 aa15.13■□□□□ 0.01
HLA-DMA-202ENST00000395303 MAFAQ8NHW3 353 aaPredicted RBP15.13■□□□□ 0.01
HLA-DMA-202ENST00000395303 ETNPPLQ8TBG4 499 aa15.13■□□□□ 0.01
HLA-DMA-202ENST00000395303 LMBR1Q8WVP7 490 aa15.13■□□□□ 0.01
HLA-DMA-202ENST00000395303 MYLIPQ8WY64 445 aa15.13■□□□□ 0.01
HLA-DMA-202ENST00000395303 HERVK_113Q902F9 699 aa15.13■□□□□ 0.01
HLA-DMA-202ENST00000395303 ATP6V0A1Q93050 837 aa15.13■□□□□ 0.01
HLA-DMA-202ENST00000395303 WNT8BQ93098 351 aa15.13■□□□□ 0.01
HLA-DMA-202ENST00000395303 DDX39AO00148 427 aaKnown RBP15.12■□□□□ 0.01
HLA-DMA-202ENST00000395303 TREHO43280 583 aa15.12■□□□□ 0.01
HLA-DMA-202ENST00000395303 CAND2O75155 1236 aa15.12■□□□□ 0.01
HLA-DMA-202ENST00000395303 PSMD10O75832 226 aa15.12■□□□□ 0.01
HLA-DMA-202ENST00000395303 CD2BP2O95400 341 aaKnown RBP15.12■□□□□ 0.01
HLA-DMA-202ENST00000395303 ACRP10323 421 aa15.12■□□□□ 0.01
HLA-DMA-202ENST00000395303 SELPP16109 830 aa15.12■□□□□ 0.01
HLA-DMA-202ENST00000395303 GCFC2P16383 781 aaKnown RBP15.12■□□□□ 0.01
HLA-DMA-202ENST00000395303 MCM2P49736 904 aa15.12■□□□□ 0.01
HLA-DMA-202ENST00000395303 NR5A1Q13285 461 aa15.12■□□□□ 0.01
HLA-DMA-202ENST00000395303 GPNMBQ14956 572 aa15.12■□□□□ 0.01
HLA-DMA-202ENST00000395303 MIS18BP1Q6P0N0 1132 aa15.12■□□□□ 0.01
HLA-DMA-202ENST00000395303 PIK3AP1Q6ZUJ8 805 aa15.12■□□□□ 0.01
HLA-DMA-202ENST00000395303 ZNF365Q70YC5 407 aa15.12■□□□□ 0.01
HLA-DMA-202ENST00000395303 RPAINQ86UA6 219 aa15.12■□□□□ 0.01
HLA-DMA-202ENST00000395303 GLG1Q92896 1179 aa15.12■□□□□ 0.01
HLA-DMA-202ENST00000395303 RNPC3Q96LT9 517 aaKnown RBP15.12■□□□□ 0.01
HLA-DMA-202ENST00000395303 NAP1L4Q99733 375 aaKnown RBP15.12■□□□□ 0.01
HLA-DMA-202ENST00000395303 AZI2Q9H6S1 392 aa15.12■□□□□ 0.01
HLA-DMA-202ENST00000395303 BRMS1Q9HCU9 246 aa15.12■□□□□ 0.01
HLA-DMA-202ENST00000395303 SETD4Q9NVD3 440 aa15.12■□□□□ 0.01
HLA-DMA-202ENST00000395303 TMEM265A0A087WTH1 108 aa15.11■□□□□ 0.01
HLA-DMA-202ENST00000395303 FGBP02675 491 aa15.11■□□□□ 0.01
HLA-DMA-202ENST00000395303 CXCL10P02778 98 aa15.11■□□□□ 0.01
HLA-DMA-202ENST00000395303 PPFIA1Q13136 1202 aa15.11■□□□□ 0.01
HLA-DMA-202ENST00000395303 TRIM29Q14134 588 aa15.11■□□□□ 0.01
HLA-DMA-202ENST00000395303 PLCB4Q15147 1175 aa15.11■□□□□ 0.01
HLA-DMA-202ENST00000395303 FAM160B1Q5W0V3 765 aa15.11■□□□□ 0.01
HLA-DMA-202ENST00000395303 LRRC8DQ7L1W4 858 aa15.11■□□□□ 0.01
HLA-DMA-202ENST00000395303 CCDC60Q8IWA6 550 aaPredicted RBP15.11■□□□□ 0.01
HLA-DMA-202ENST00000395303 DIS3L2Q8IYB7 885 aaKnown RBP15.11■□□□□ 0.01
HLA-DMA-202ENST00000395303 TNPO1Q92973 898 aaKnown RBP15.11■□□□□ 0.01
HLA-DMA-202ENST00000395303 TMX3Q96JJ7 454 aa15.11■□□□□ 0.01
HLA-DMA-202ENST00000395303 KCNMB3Q9NPA1 279 aa15.11■□□□□ 0.01
HLA-DMA-202ENST00000395303 PCDHA10Q9Y5I2 948 aa15.11■□□□□ 0.01
HLA-DMA-202ENST00000395303 MAFBQ9Y5Q3 323 aaPredicted RBP15.11■□□□□ 0.01
HLA-DMA-202ENST00000395303 ARID2Q68CP9 1835 aa15.1■□□□□ 0.01
HLA-DMA-202ENST00000395303 FAM205CA6NFA0 338 aa15.1■□□□□ 0.01
HLA-DMA-202ENST00000395303 RRN3P2A6NIE6 340 aa15.1■□□□□ 0.01
HLA-DMA-202ENST00000395303 BTBD18B2RXH4 712 aa15.1■□□□□ 0.01
HLA-DMA-202ENST00000395303 TBX3O15119 743 aa15.1■□□□□ 0.01
HLA-DMA-202ENST00000395303 SLC37A4O43826 429 aa15.1■□□□□ 0.01
HLA-DMA-202ENST00000395303 GAS7O60861 476 aa15.1■□□□□ 0.01
HLA-DMA-202ENST00000395303 MARK3P27448 753 aa15.1■□□□□ 0.01
HLA-DMA-202ENST00000395303 SFNP31947 248 aa15.1■□□□□ 0.01
HLA-DMA-202ENST00000395303 GRIK4Q16099 956 aa15.1■□□□□ 0.01
HLA-DMA-202ENST00000395303 LETM2Q2VYF4 491 aa15.1■□□□□ 0.01
HLA-DMA-202ENST00000395303 MARCH8Q5T0T0 291 aa15.1■□□□□ 0.01
HLA-DMA-202ENST00000395303 ZNF618Q5T7W0 954 aa15.1■□□□□ 0.01
HLA-DMA-202ENST00000395303 LRCH2Q5VUJ6 765 aa15.1■□□□□ 0.01
HLA-DMA-202ENST00000395303 FBXO18Q8NFZ0 1043 aa15.1■□□□□ 0.01
HLA-DMA-202ENST00000395303 RDM1Q8NG50 284 aa15.1■□□□□ 0.01
HLA-DMA-202ENST00000395303 FAM20AQ96MK3 541 aa15.1■□□□□ 0.01
HLA-DMA-202ENST00000395303 UIMC1Q96RL1 719 aa15.1■□□□□ 0.01
HLA-DMA-202ENST00000395303 TEKT3Q9BXF9 490 aa15.1■□□□□ 0.01
HLA-DMA-202ENST00000395303 ZNF302Q9NR11 478 aa15.1■□□□□ 0.01
HLA-DMA-202ENST00000395303 DDX25Q9UHL0 483 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms