RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 SULT1E1P49888 294 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 MYL6P60660 151 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 CBX1P83916 185 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 ICA1Q05084 483 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 STRN3Q13033 797 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 MTX1Q13505 466 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 DPYSQ14117 519 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 ZNF423Q2M1K9 1284 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 FAM26DQ5JW98 314 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 NUTM2DQ5VT03 806 aaPredicted RBP4.69□□□□□ -1.66
HERC4-204ENST00000395198 RAB12Q6IQ22 244 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 TYW1BQ6NUM6 668 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 CLEC2AQ6UVW9 174 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 HHIPL2Q6UWX4 724 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 KDELC2Q7Z4H8 507 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 SPATA21Q7Z572 469 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 NUTM2AQ8IVF1 878 aaPredicted RBP4.69□□□□□ -1.66
HERC4-204ENST00000395198 PIGSQ96S52 555 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 XAB2Q9HCS7 855 aaKnown RBP4.69□□□□□ -1.66
HERC4-204ENST00000395198 GLRX2Q9NS18 164 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 IL1RAPL1Q9NZN1 696 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 MTUS1Q9ULD2 1270 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 TRIM33Q9UPN9 1127 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 EIF4G3O43432 1585 aaKnown RBP4.68□□□□□ -1.66
HERC4-204ENST00000395198 PI4K2BG5E9Z4 385 aa4.68□□□□□ -1.66
HERC4-204ENST00000395198 USP1O94782 785 aa4.68□□□□□ -1.66
HERC4-204ENST00000395198 TBC1D8O95759 1140 aa4.68□□□□□ -1.66
HERC4-204ENST00000395198 C6orf222P0C671 652 aaPredicted RBP4.68□□□□□ -1.66
HERC4-204ENST00000395198 CDK4P11802 303 aa4.68□□□□□ -1.66
HERC4-204ENST00000395198 YARSP54577 528 aaKnown RBP4.68□□□□□ -1.66
HERC4-204ENST00000395198 TFAP4Q01664 338 aa4.68□□□□□ -1.66
HERC4-204ENST00000395198 ATP2B3Q16720 1220 aa4.68□□□□□ -1.66
HERC4-204ENST00000395198 OTUD7BQ6GQQ9 843 aa4.68□□□□□ -1.66
HERC4-204ENST00000395198 RIN3Q8TB24 985 aa4.68□□□□□ -1.66
HERC4-204ENST00000395198 UNKQ9C0B0 810 aaKnown RBP4.68□□□□□ -1.66
HERC4-204ENST00000395198 SIL1Q9H173 461 aa4.68□□□□□ -1.66
HERC4-204ENST00000395198 SPON1Q9HCB6 807 aa4.68□□□□□ -1.66
HERC4-204ENST00000395198 TTC21BQ7Z4L5 1316 aa4.68□□□□□ -1.66
HERC4-204ENST00000395198 ZBBXA8MT70 800 aa4.68□□□□□ -1.66
HERC4-204ENST00000395198 OPA1O60313 960 aa4.68□□□□□ -1.66
HERC4-204ENST00000395198 SMPD2O60906 423 aa4.68□□□□□ -1.66
HERC4-204ENST00000395198 ATP5BP06576 529 aaKnown RBP4.68□□□□□ -1.66
HERC4-204ENST00000395198 POLBP06746 335 aa4.68□□□□□ -1.66
HERC4-204ENST00000395198 PSMA4P25789 261 aaKnown RBP4.68□□□□□ -1.66
HERC4-204ENST00000395198 HNF1BP35680 557 aa4.68□□□□□ -1.66
HERC4-204ENST00000395198 LIFRP42702 1097 aa4.68□□□□□ -1.66
HERC4-204ENST00000395198 AIMP1Q12904 312 aaKnown RBP4.68□□□□□ -1.66
HERC4-204ENST00000395198 PRKG1Q13976 671 aa4.68□□□□□ -1.66
HERC4-204ENST00000395198 GPR158Q5T848 1215 aa4.68□□□□□ -1.66
HERC4-204ENST00000395198 PI16Q6UXB8 463 aa4.68□□□□□ -1.66
HERC4-204ENST00000395198 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.68□□□□□ -1.66
HERC4-204ENST00000395198 TTC39CQ8N584 583 aa4.68□□□□□ -1.66
HERC4-204ENST00000395198 TPCN2Q8NHX9 752 aa4.68□□□□□ -1.66
HERC4-204ENST00000395198 ZSCAN18Q8TBC5 510 aaPredicted RBP4.68□□□□□ -1.66
HERC4-204ENST00000395198 L3MBTL2Q969R5 705 aa4.68□□□□□ -1.66
HERC4-204ENST00000395198 COL26A1Q96A83 441 aa4.68□□□□□ -1.66
HERC4-204ENST00000395198 EHD1Q9H4M9 534 aa4.68□□□□□ -1.66
HERC4-204ENST00000395198 MVB12BQ9H7P6 319 aa4.68□□□□□ -1.66
HERC4-204ENST00000395198 GRPEL1Q9HAV7 217 aa4.68□□□□□ -1.66
HERC4-204ENST00000395198 HOOK1Q9UJC3 728 aaKnown RBP4.68□□□□□ -1.66
HERC4-204ENST00000395198 PTPN22Q9Y2R2 807 aa4.68□□□□□ -1.66
HERC4-204ENST00000395198 RTCBQ9Y3I0 505 aaKnown RBP4.68□□□□□ -1.66
HERC4-204ENST00000395198 SFI1A8K8P3 1242 aa4.68□□□□□ -1.66
HERC4-204ENST00000395198 GJB3O75712 270 aa4.68□□□□□ -1.66
HERC4-204ENST00000395198 SNUPNO95149 360 aaKnown RBP4.68□□□□□ -1.66
HERC4-204ENST00000395198 STMN1P16949 149 aa4.68□□□□□ -1.66
HERC4-204ENST00000395198 ELF1P32519 619 aa4.68□□□□□ -1.66
HERC4-204ENST00000395198 CRKP46108 304 aa4.68□□□□□ -1.66
HERC4-204ENST00000395198 AK2P54819 239 aa4.68□□□□□ -1.66
HERC4-204ENST00000395198 SLC26A5P58743 744 aa4.68□□□□□ -1.66
HERC4-204ENST00000395198 B2MP61769 119 aa4.68□□□□□ -1.66
HERC4-204ENST00000395198 SMAD1Q15797 465 aaKnown RBP4.68□□□□□ -1.66
HERC4-204ENST00000395198 PPP2R5EQ16537 467 aa4.68□□□□□ -1.66
HERC4-204ENST00000395198 PLA2G4EQ3MJ16 856 aa4.68□□□□□ -1.66
HERC4-204ENST00000395198 C5orf22Q49AR2 442 aa4.68□□□□□ -1.66
HERC4-204ENST00000395198 MINDY4Q4G0A6 757 aa4.68□□□□□ -1.66
HERC4-204ENST00000395198 IKBIPQ70UQ0 350 aa4.68□□□□□ -1.66
HERC4-204ENST00000395198 ZNF771Q7L3S4 317 aaPredicted RBP4.68□□□□□ -1.66
HERC4-204ENST00000395198 NECAB2Q7Z6G3 386 aa4.68□□□□□ -1.66
HERC4-204ENST00000395198 CCDC170Q8IYT3 715 aa4.68□□□□□ -1.66
HERC4-204ENST00000395198 TNIP3Q96KP6 325 aa4.68□□□□□ -1.66
HERC4-204ENST00000395198 FAM167AQ96KS9 214 aa4.68□□□□□ -1.66
HERC4-204ENST00000395198 WDR6Q9NNW5 1121 aaKnown RBP4.68□□□□□ -1.66
HERC4-204ENST00000395198 SAP30BPQ9UHR5 308 aaKnown RBP4.68□□□□□ -1.66
HERC4-204ENST00000395198 EME2A4GXA9 379 aaPredicted RBP4.67□□□□□ -1.66
HERC4-204ENST00000395198 HDAC3O15379 428 aa4.67□□□□□ -1.66
HERC4-204ENST00000395198 NDUFB5O43674 189 aa4.67□□□□□ -1.66
HERC4-204ENST00000395198 TSPAN1O60635 241 aa4.67□□□□□ -1.66
HERC4-204ENST00000395198 VIMP08670 466 aaKnown RBP4.67□□□□□ -1.66
HERC4-204ENST00000395198 CLTBP09497 229 aa4.67□□□□□ -1.66
HERC4-204ENST00000395198 PF4V1P10720 104 aa4.67□□□□□ -1.66
HERC4-204ENST00000395198 ID4P47928 161 aa4.67□□□□□ -1.66
HERC4-204ENST00000395198 IREB2P48200 963 aaKnown RBP4.67□□□□□ -1.66
HERC4-204ENST00000395198 NR1H2P55055 460 aa4.67□□□□□ -1.66
HERC4-204ENST00000395198 HADHBP55084 474 aaKnown RBP4.67□□□□□ -1.66
HERC4-204ENST00000395198 COG7P83436 770 aa4.67□□□□□ -1.66
HERC4-204ENST00000395198 SLC14A1Q13336 389 aa4.67□□□□□ -1.66
HERC4-204ENST00000395198 COL9A2Q14055 689 aaPredicted RBP4.67□□□□□ -1.66
HERC4-204ENST00000395198 PDE3AQ14432 1141 aa4.67□□□□□ -1.66
HERC4-204ENST00000395198 BECN1Q14457 450 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms