RNA–Protein interactions for RNA: ENST00000394997.5

HIF1A-203, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HIF1A, Length 3,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-203ENST00000394997 PCDHA1Q9Y5I3 950 aa11.35□□□□□ -0.59
HIF1A-203ENST00000394997 PLA2G4BP0C869 781 aa11.35□□□□□ -0.59
HIF1A-203ENST00000394997 MYBP10242 640 aa11.35□□□□□ -0.59
HIF1A-203ENST00000394997 MAN2A1Q16706 1144 aa11.35□□□□□ -0.59
HIF1A-203ENST00000394997 DYMQ7RTS9 669 aa11.35□□□□□ -0.59
HIF1A-203ENST00000394997 SYN2Q92777 582 aaPredicted RBP11.35□□□□□ -0.59
HIF1A-203ENST00000394997 REEP2Q9BRK0 252 aa11.35□□□□□ -0.59
HIF1A-203ENST00000394997 SUGCTQ9HAC7 445 aa11.35□□□□□ -0.59
HIF1A-203ENST00000394997 LOC102724159A0A0B4J2E5 919 aa11.34□□□□□ -0.59
HIF1A-203ENST00000394997 STBD1O95210 358 aa11.34□□□□□ -0.59
HIF1A-203ENST00000394997 GH2P01242 217 aa11.34□□□□□ -0.59
HIF1A-203ENST00000394997 PPP1R2P41236 205 aa11.34□□□□□ -0.59
HIF1A-203ENST00000394997 ASIC1P78348 528 aa11.34□□□□□ -0.59
HIF1A-203ENST00000394997 PWP2Q15269 919 aaKnown RBP11.34□□□□□ -0.59
HIF1A-203ENST00000394997 ZNF569Q5MCW4 686 aa11.34□□□□□ -0.59
HIF1A-203ENST00000394997 NCAPH2Q6IBW4 605 aa11.34□□□□□ -0.59
HIF1A-203ENST00000394997 REPS2Q8NFH8 660 aa11.34□□□□□ -0.59
HIF1A-203ENST00000394997 AIPL1Q9NZN9 384 aa11.34□□□□□ -0.59
HIF1A-203ENST00000394997 ZNF70Q9UC06 446 aaPredicted RBP11.34□□□□□ -0.59
HIF1A-203ENST00000394997 TMEM59LQ9UK28 342 aa11.34□□□□□ -0.59
HIF1A-203ENST00000394997 LRRC53A6NM62 1247 aa11.34□□□□□ -0.59
HIF1A-203ENST00000394997 VSNL1P62760 191 aa11.34□□□□□ -0.59
HIF1A-203ENST00000394997 FILIP1LQ4L180 1135 aa11.34□□□□□ -0.59
HIF1A-203ENST00000394997 RNF187Q5TA31 235 aaPredicted RBP11.34□□□□□ -0.59
HIF1A-203ENST00000394997 SYDE2Q5VT97 1194 aa11.34□□□□□ -0.59
HIF1A-203ENST00000394997 SMCR8Q8TEV9 937 aaPredicted RBP11.34□□□□□ -0.59
HIF1A-203ENST00000394997 TMX4Q9H1E5 349 aaPredicted RBP11.34□□□□□ -0.59
HIF1A-203ENST00000394997 BICDL2A1A5D9 508 aa11.34□□□□□ -0.59
HIF1A-203ENST00000394997 ATP8B1O43520 1251 aa11.34□□□□□ -0.59
HIF1A-203ENST00000394997 CHMP4BP1P59074 171 aa11.34□□□□□ -0.59
HIF1A-203ENST00000394997 ICA1Q05084 483 aa11.34□□□□□ -0.59
HIF1A-203ENST00000394997 EPHA7Q15375 998 aa11.34□□□□□ -0.59
HIF1A-203ENST00000394997 EDRF1Q3B7T1 1238 aa11.34□□□□□ -0.59
HIF1A-203ENST00000394997 ADAM21Q9UKJ8 722 aa11.34□□□□□ -0.59
HIF1A-203ENST00000394997 DNAH12Q6ZR08 3092 aa11.34□□□□□ -0.59
HIF1A-203ENST00000394997 USP8P40818 1118 aa11.33□□□□□ -0.6
HIF1A-203ENST00000394997 SLC30A5Q8TAD4 765 aa11.33□□□□□ -0.6
HIF1A-203ENST00000394997 TRIM47Q96LD4 638 aa11.33□□□□□ -0.6
HIF1A-203ENST00000394997 JRKLQ9Y4A0 524 aa11.33□□□□□ -0.6
HIF1A-203ENST00000394997 AGPSO00116 658 aa11.33□□□□□ -0.6
HIF1A-203ENST00000394997 MATR3P43243 847 aaKnown RBP eCLIP11.33□□□□□ -0.64e-6■■■□□ 17.2
HIF1A-203ENST00000394997 TNNI2P48788 182 aa11.33□□□□□ -0.6
HIF1A-203ENST00000394997 DNA2P51530 1060 aa11.33□□□□□ -0.6
HIF1A-203ENST00000394997 ABCB5Q2M3G0 1257 aa11.33□□□□□ -0.6
HIF1A-203ENST00000394997 KLHDC7AQ5VTJ3 777 aa11.33□□□□□ -0.6
HIF1A-203ENST00000394997 ANKRD20A12PQ8NF67 263 aa11.33□□□□□ -0.6
HIF1A-203ENST00000394997 FAM151AQ8WW52 585 aa11.33□□□□□ -0.6
HIF1A-203ENST00000394997 CEP63Q96MT8 703 aa11.33□□□□□ -0.6
HIF1A-203ENST00000394997 GBP3Q9H0R5 595 aa11.33□□□□□ -0.6
HIF1A-203ENST00000394997 OLFML3Q9NRN5 406 aa11.33□□□□□ -0.6
HIF1A-203ENST00000394997 HERC5Q9UII4 1024 aaKnown RBP11.33□□□□□ -0.6
HIF1A-203ENST00000394997 FBXL5Q9UKA1 691 aa11.33□□□□□ -0.6
HIF1A-203ENST00000394997 ZBTB21Q9ULJ3 1066 aa11.33□□□□□ -0.6
HIF1A-203ENST00000394997 PCDHA12Q9UN75 941 aa11.33□□□□□ -0.6
HIF1A-203ENST00000394997 USP20Q9Y2K6 914 aa11.33□□□□□ -0.6
HIF1A-203ENST00000394997 BTNL10A8MVZ5 291 aa11.33□□□□□ -0.6
HIF1A-203ENST00000394997 G3V3G9 751 aa11.33□□□□□ -0.6
HIF1A-203ENST00000394997 ZNF185O15231 689 aa11.33□□□□□ -0.6
HIF1A-203ENST00000394997 SRGAP2O75044 1071 aa11.33□□□□□ -0.6
HIF1A-203ENST00000394997 PRPF6O94906 941 aaKnown RBP11.33□□□□□ -0.6
HIF1A-203ENST00000394997 PRLRP16471 622 aa11.33□□□□□ -0.6
HIF1A-203ENST00000394997 LIG3P49916 1009 aa11.33□□□□□ -0.6
HIF1A-203ENST00000394997 VAV2P52735 878 aa11.33□□□□□ -0.6
HIF1A-203ENST00000394997 ITIH3Q06033 890 aa11.33□□□□□ -0.6
HIF1A-203ENST00000394997 DGKZQ13574 1117 aa11.33□□□□□ -0.6
HIF1A-203ENST00000394997 DCAF8Q5TAQ9 597 aa11.33□□□□□ -0.6
HIF1A-203ENST00000394997 TLR10Q9BXR5 811 aa11.33□□□□□ -0.6
HIF1A-203ENST00000394997 EDEM3Q9BZQ6 932 aa11.33□□□□□ -0.6
HIF1A-203ENST00000394997 HAUS4Q9H6D7 363 aa11.33□□□□□ -0.6
HIF1A-203ENST00000394997 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.33□□□□□ -0.6
HIF1A-203ENST00000394997 KIAA1024Q9UPX6 916 aa11.33□□□□□ -0.6
HIF1A-203ENST00000394997 AKAP3O75969 853 aa11.32□□□□□ -0.6
HIF1A-203ENST00000394997 GOLGA5Q8TBA6 731 aa11.32□□□□□ -0.6
HIF1A-203ENST00000394997 CAPZA3Q96KX2 299 aa11.32□□□□□ -0.6
HIF1A-203ENST00000394997 NUP58Q9BVL2 599 aa11.32□□□□□ -0.6
HIF1A-203ENST00000394997 KDM3AQ9Y4C1 1321 aa11.32□□□□□ -0.6
HIF1A-203ENST00000394997 CTAGE15A4D2H0 777 aa11.32□□□□□ -0.6
HIF1A-203ENST00000394997 LRRIQ3A6PVS8 624 aaPredicted RBP11.32□□□□□ -0.6
HIF1A-203ENST00000394997 MEIS1O00470 390 aa11.32□□□□□ -0.6
HIF1A-203ENST00000394997 CTAGE8P0CG41 777 aa11.32□□□□□ -0.6
HIF1A-203ENST00000394997 ITGB5P18084 799 aa11.32□□□□□ -0.6
HIF1A-203ENST00000394997 ECHS1P30084 290 aa11.32□□□□□ -0.6
HIF1A-203ENST00000394997 CDR1P51861 262 aa11.32□□□□□ -0.6
HIF1A-203ENST00000394997 ZNF280AP59817 542 aaPredicted RBP11.32□□□□□ -0.6
HIF1A-203ENST00000394997 CACNB1Q02641 598 aaPredicted RBP11.32□□□□□ -0.6
HIF1A-203ENST00000394997 LONRF2Q1L5Z9 754 aa11.32□□□□□ -0.6
HIF1A-203ENST00000394997 HDXQ7Z353 690 aa11.32□□□□□ -0.6
HIF1A-203ENST00000394997 CTAGE6Q86UF2 777 aa11.32□□□□□ -0.6
HIF1A-203ENST00000394997 CTAGE4Q8IX94 777 aa11.32□□□□□ -0.6
HIF1A-203ENST00000394997 LRRC57Q8N9N7 239 aa11.32□□□□□ -0.6
HIF1A-203ENST00000394997 PANK4Q9NVE7 773 aa11.32□□□□□ -0.6
HIF1A-203ENST00000394997 FAN1Q9Y2M0 1017 aa11.32□□□□□ -0.6
HIF1A-203ENST00000394997 ATP2C2O75185 946 aa11.32□□□□□ -0.6
HIF1A-203ENST00000394997 ATP2B2Q01814 1243 aa11.32□□□□□ -0.6
HIF1A-203ENST00000394997 CYP27A1Q02318 531 aa11.32□□□□□ -0.6
HIF1A-203ENST00000394997 RINT1Q6NUQ1 792 aa11.32□□□□□ -0.6
HIF1A-203ENST00000394997 IL31RAQ8NI17 732 aa11.32□□□□□ -0.6
HIF1A-203ENST00000394997 STXBP5LQ9Y2K9 1186 aa11.32□□□□□ -0.6
HIF1A-203ENST00000394997 SSU72P8A0A1W2PR75 194 aa11.31□□□□□ -0.6
HIF1A-203ENST00000394997 CCDC151A5D8V7 595 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms