RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 SETD4Q9NVD3 440 aa22.48■■□□□ 1.19
SNCA-203ENST00000394986 NOL7Q9UMY1 257 aaKnown RBP22.48■■□□□ 1.19
SNCA-203ENST00000394986 PCDHA10Q9Y5I2 948 aa22.48■■□□□ 1.19
SNCA-203ENST00000394986 UMODL1Q5DID0 1318 aa22.47■■□□□ 1.19
SNCA-203ENST00000394986 KIAA0355O15063 1070 aa22.47■■□□□ 1.19
SNCA-203ENST00000394986 TBX3O15119 743 aa22.47■■□□□ 1.19
SNCA-203ENST00000394986 PSAPP07602 524 aa22.47■■□□□ 1.19
SNCA-203ENST00000394986 PDCP20941 246 aa22.47■■□□□ 1.19
SNCA-203ENST00000394986 MDM2Q00987 491 aaPredicted RBP22.47■■□□□ 1.19
SNCA-203ENST00000394986 PRPF38BQ5VTL8 546 aaKnown RBP22.47■■□□□ 1.19
SNCA-203ENST00000394986 MIER3Q7Z3K6 550 aa22.47■■□□□ 1.19
SNCA-203ENST00000394986 GABBR1Q9UBS5 961 aa22.47■■□□□ 1.19
SNCA-203ENST00000394986 NOD1Q9Y239 953 aa22.47■■□□□ 1.19
SNCA-203ENST00000394986 PCDHB6Q9Y5E3 794 aa22.47■■□□□ 1.19
SNCA-203ENST00000394986 C17orf102A2RUQ5 167 aa22.46■■□□□ 1.19
SNCA-203ENST00000394986 EML1O00423 815 aa22.46■■□□□ 1.19
SNCA-203ENST00000394986 TRAPPC10P48553 1259 aa22.46■■□□□ 1.19
SNCA-203ENST00000394986 JAK3P52333 1124 aa22.46■■□□□ 1.19
SNCA-203ENST00000394986 PLCB4Q15147 1175 aa22.46■■□□□ 1.19
SNCA-203ENST00000394986 UGCGQ16739 394 aa22.46■■□□□ 1.19
SNCA-203ENST00000394986 FAM160B1Q5W0V3 765 aa22.46■■□□□ 1.19
SNCA-203ENST00000394986 PLPPR4Q7Z2D5 763 aa22.46■■□□□ 1.19
SNCA-203ENST00000394986 AFAP1L1Q8TED9 768 aa22.46■■□□□ 1.19
SNCA-203ENST00000394986 BAG4O95429 457 aaKnown RBP22.45■■□□□ 1.18
SNCA-203ENST00000394986 RAG1P15918 1043 aa22.45■■□□□ 1.18
SNCA-203ENST00000394986 ATP4AP20648 1035 aa22.45■■□□□ 1.18
SNCA-203ENST00000394986 HOXC8P31273 242 aa22.45■■□□□ 1.18
SNCA-203ENST00000394986 MAGEA10P43363 369 aaPredicted RBP22.45■■□□□ 1.18
SNCA-203ENST00000394986 PDXDC2PQ6P474 469 aa22.45■■□□□ 1.18
SNCA-203ENST00000394986 TRMT1LQ7Z2T5 733 aaKnown RBP22.45■■□□□ 1.18
SNCA-203ENST00000394986 SLFN12Q8IYM2 578 aa22.45■■□□□ 1.18
SNCA-203ENST00000394986 LMBR1Q8WVP7 490 aa22.45■■□□□ 1.18
SNCA-203ENST00000394986 DHX38Q92620 1227 aaKnown RBP22.45■■□□□ 1.18
SNCA-203ENST00000394986 BADQ92934 168 aa22.45■■□□□ 1.18
SNCA-203ENST00000394986 MTMR9Q96QG7 549 aa22.45■■□□□ 1.18
SNCA-203ENST00000394986 NOC4LQ9BVI4 516 aaKnown RBP22.45■■□□□ 1.18
SNCA-203ENST00000394986 HIPK3Q9H422 1215 aa22.45■■□□□ 1.18
SNCA-203ENST00000394986 TRPC6Q9Y210 931 aa22.45■■□□□ 1.18
SNCA-203ENST00000394986 RBAK-RBAKDNI3L0D1 243 aa22.44■■□□□ 1.18
SNCA-203ENST00000394986 SFNP31947 248 aa22.44■■□□□ 1.18
SNCA-203ENST00000394986 CYP2C18P33260 490 aa22.44■■□□□ 1.18
SNCA-203ENST00000394986 TXKP42681 527 aa22.44■■□□□ 1.18
SNCA-203ENST00000394986 PPFIA1Q13136 1202 aa22.44■■□□□ 1.18
SNCA-203ENST00000394986 PPP2R5CQ13362 524 aa22.44■■□□□ 1.18
SNCA-203ENST00000394986 NCAPH2Q6IBW4 605 aa22.44■■□□□ 1.18
SNCA-203ENST00000394986 WNT8BQ93098 351 aa22.44■■□□□ 1.18
SNCA-203ENST00000394986 ZBTB10Q96DT7 871 aa22.44■■□□□ 1.18
SNCA-203ENST00000394986 MTMR6Q9Y217 621 aa22.44■■□□□ 1.18
SNCA-203ENST00000394986 IGSF9BQ9UPX0 1349 aa22.44■■□□□ 1.18
SNCA-203ENST00000394986 TREHO43280 583 aa22.43■■□□□ 1.18
SNCA-203ENST00000394986 IGBP1P78318 339 aa22.43■■□□□ 1.18
SNCA-203ENST00000394986 SPIRE1Q08AE8 756 aa22.43■■□□□ 1.18
SNCA-203ENST00000394986 GRIK4Q16099 956 aa22.43■■□□□ 1.18
SNCA-203ENST00000394986 TRAPPC12Q8WVT3 735 aa22.43■■□□□ 1.18
SNCA-203ENST00000394986 ATP6V0A1Q93050 837 aa22.43■■□□□ 1.18
SNCA-203ENST00000394986 MAFBQ9Y5Q3 323 aaPredicted RBP22.43■■□□□ 1.18
SNCA-203ENST00000394986 POTEB3A0JP26 581 aa22.42■■□□□ 1.18
SNCA-203ENST00000394986 ZNF862O60290 1169 aa22.42■■□□□ 1.18
SNCA-203ENST00000394986 TIMP1P01033 207 aa22.42■■□□□ 1.18
SNCA-203ENST00000394986 INSRRP14616 1297 aa22.42■■□□□ 1.18
SNCA-203ENST00000394986 CCL23P55773 120 aa22.42■■□□□ 1.18
SNCA-203ENST00000394986 POTEBQ6S5H4 581 aa22.42■■□□□ 1.18
SNCA-203ENST00000394986 CHRDL2Q6WN34 429 aa22.42■■□□□ 1.18
SNCA-203ENST00000394986 CKAP2LQ8IYA6 745 aa22.42■■□□□ 1.18
SNCA-203ENST00000394986 BANK1Q8NDB2 785 aa22.42■■□□□ 1.18
SNCA-203ENST00000394986 ATP8B4Q8TF62 1192 aa22.42■■□□□ 1.18
SNCA-203ENST00000394986 TTC12Q9H892 705 aaPredicted RBP22.42■■□□□ 1.18
SNCA-203ENST00000394986 LTBP2Q14767 1821 aa22.42■■□□□ 1.18
SNCA-203ENST00000394986 STX6O43752 255 aa22.41■■□□□ 1.18
SNCA-203ENST00000394986 OR52Z1P0C646 297 aa22.41■■□□□ 1.18
SNCA-203ENST00000394986 SLC26A2P50443 739 aa22.41■■□□□ 1.18
SNCA-203ENST00000394986 ADAM17P78536 824 aa22.41■■□□□ 1.18
SNCA-203ENST00000394986 ORC2Q13416 577 aaPredicted RBP22.41■■□□□ 1.18
SNCA-203ENST00000394986 RILPL1Q5EBL4 403 aa22.41■■□□□ 1.18
SNCA-203ENST00000394986 C4orf32Q8N8J7 132 aa22.41■■□□□ 1.18
SNCA-203ENST00000394986 RDM1Q8NG50 284 aa22.41■■□□□ 1.18
SNCA-203ENST00000394986 LBHD1Q9BQE6 289 aaPredicted RBP22.41■■□□□ 1.18
SNCA-203ENST00000394986 WNT8AQ9H1J5 351 aa22.41■■□□□ 1.18
SNCA-203ENST00000394986 PCDHA12Q9UN75 941 aa22.41■■□□□ 1.18
SNCA-203ENST00000394986 NRCAMQ92823 1304 aa22.41■■□□□ 1.18
SNCA-203ENST00000394986 POTEMA6NI47 508 aa22.4■■□□□ 1.18
SNCA-203ENST00000394986 PRKCEQ02156 737 aa22.4■■□□□ 1.18
SNCA-203ENST00000394986 RESTQ13127 1097 aa22.4■■□□□ 1.18
SNCA-203ENST00000394986 PTK7Q13308 1070 aa22.4■■□□□ 1.18
SNCA-203ENST00000394986 MARCH8Q5T0T0 291 aa22.4■■□□□ 1.18
SNCA-203ENST00000394986 BRAPQ7Z569 592 aa22.4■■□□□ 1.18
SNCA-203ENST00000394986 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.4■■□□□ 1.18
SNCA-203ENST00000394986 PTGDRQ13258 359 aa22.4■■□□□ 1.18
SNCA-203ENST00000394986 FOXD4L5Q5VV16 416 aaPredicted RBP22.4■■□□□ 1.18
SNCA-203ENST00000394986 FAM173BQ6P4H8 233 aa22.4■■□□□ 1.18
SNCA-203ENST00000394986 RUFY4Q6ZNE9 571 aa22.4■■□□□ 1.18
SNCA-203ENST00000394986 SERINC5Q86VE9 423 aa22.4■■□□□ 1.18
SNCA-203ENST00000394986 FOXD4L4Q8WXT5 416 aaPredicted RBP22.4■■□□□ 1.18
SNCA-203ENST00000394986 SCLYQ96I15 445 aa22.4■■□□□ 1.18
SNCA-203ENST00000394986 GDF15Q99988 308 aa22.4■■□□□ 1.18
SNCA-203ENST00000394986 TUBE1Q9UJT0 475 aa22.4■■□□□ 1.18
SNCA-203ENST00000394986 HBP1O60381 514 aa22.39■■□□□ 1.17
SNCA-203ENST00000394986 OATP04181 439 aa22.39■■□□□ 1.17
SNCA-203ENST00000394986 GNAT1P11488 350 aa22.39■■□□□ 1.17
SNCA-203ENST00000394986 CYP4A11Q02928 519 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms