RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 SLC9C1Q4G0N8 1177 aa17.48■□□□□ 0.39
SMARCD1-202ENST00000394963 MUM1L1Q5H9M0 696 aa17.48■□□□□ 0.39
SMARCD1-202ENST00000394963 CDKAL1Q5VV42 579 aa17.48■□□□□ 0.39
SMARCD1-202ENST00000394963 PPP4R3AQ6IN85 833 aa17.48■□□□□ 0.39
SMARCD1-202ENST00000394963 IL31RAQ8NI17 732 aa17.48■□□□□ 0.39
SMARCD1-202ENST00000394963 TAF4BQ92750 862 aa17.48■□□□□ 0.39
SMARCD1-202ENST00000394963 CEP170P1Q96L14 293 aa17.48■□□□□ 0.39
SMARCD1-202ENST00000394963 GOLPH3Q9H4A6 298 aa17.48■□□□□ 0.39
SMARCD1-202ENST00000394963 PARVGQ9HBI0 331 aa17.48■□□□□ 0.39
SMARCD1-202ENST00000394963 LUC7LQ9NQ29 371 aaKnown RBP17.48■□□□□ 0.39
SMARCD1-202ENST00000394963 KCNH7Q9NS40 1196 aa17.48■□□□□ 0.39
SMARCD1-202ENST00000394963 SLC16A4O15374 487 aa17.48■□□□□ 0.39
SMARCD1-202ENST00000394963 CALUO43852 315 aaPredicted RBP17.48■□□□□ 0.39
SMARCD1-202ENST00000394963 TACC1O75410 805 aa17.48■□□□□ 0.39
SMARCD1-202ENST00000394963 GJC1P36383 396 aa17.48■□□□□ 0.39
SMARCD1-202ENST00000394963 IGBP1P78318 339 aa17.48■□□□□ 0.39
SMARCD1-202ENST00000394963 KCNB1Q14721 858 aa17.48■□□□□ 0.39
SMARCD1-202ENST00000394963 STXBP4Q6ZWJ1 553 aa17.48■□□□□ 0.39
SMARCD1-202ENST00000394963 REXO1L1PQ8IX06 675 aa17.48■□□□□ 0.39
SMARCD1-202ENST00000394963 CNKSR2Q8WXI2 1034 aa17.48■□□□□ 0.39
SMARCD1-202ENST00000394963 GOLGA1Q92805 767 aa17.48■□□□□ 0.39
SMARCD1-202ENST00000394963 GLG1Q92896 1179 aa17.48■□□□□ 0.39
SMARCD1-202ENST00000394963 SECISBP2LQ93073 1101 aaKnown RBP17.48■□□□□ 0.39
SMARCD1-202ENST00000394963 SMARCAL1Q9NZC9 954 aa17.48■□□□□ 0.39
SMARCD1-202ENST00000394963 LIMA1Q9UHB6 759 aaKnown RBP17.48■□□□□ 0.39
SMARCD1-202ENST00000394963 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.47■□□□□ 0.39
SMARCD1-202ENST00000394963 EXOC3L4Q17RC7 722 aa17.47■□□□□ 0.39
SMARCD1-202ENST00000394963 KIAA0753Q2KHM9 967 aa17.47■□□□□ 0.39
SMARCD1-202ENST00000394963 P2RX7Q99572 595 aaKnown RBP17.47■□□□□ 0.39
SMARCD1-202ENST00000394963 ELP3Q9H9T3 547 aa17.47■□□□□ 0.39
SMARCD1-202ENST00000394963 HYOU1Q9Y4L1 999 aa17.47■□□□□ 0.39
SMARCD1-202ENST00000394963 CACNA1SQ13698 1873 aa17.47■□□□□ 0.39
SMARCD1-202ENST00000394963 GFPT2O94808 682 aa17.47■□□□□ 0.39
SMARCD1-202ENST00000394963 FTCDO95954 541 aa17.47■□□□□ 0.39
SMARCD1-202ENST00000394963 SLC9A1P19634 815 aa17.47■□□□□ 0.39
SMARCD1-202ENST00000394963 TRIM14Q14142 442 aa17.47■□□□□ 0.39
SMARCD1-202ENST00000394963 ZNF710Q8N1W2 664 aa17.47■□□□□ 0.39
SMARCD1-202ENST00000394963 ALS2CR12Q96Q35 445 aa17.47■□□□□ 0.39
SMARCD1-202ENST00000394963 PANX2Q96RD6 677 aa17.47■□□□□ 0.39
SMARCD1-202ENST00000394963 FEM1BQ9UK73 627 aa17.47■□□□□ 0.39
SMARCD1-202ENST00000394963 DDX60Q8IY21 1712 aaKnown RBP17.47■□□□□ 0.39
SMARCD1-202ENST00000394963 ROBO3Q96MS0 1386 aa17.47■□□□□ 0.39
SMARCD1-202ENST00000394963 BIRC3Q13489 604 aa17.46■□□□□ 0.39
SMARCD1-202ENST00000394963 COG2Q14746 738 aa17.46■□□□□ 0.39
SMARCD1-202ENST00000394963 ASIC2Q16515 512 aa17.46■□□□□ 0.39
SMARCD1-202ENST00000394963 HSP90B2PQ58FF3 399 aa17.46■□□□□ 0.39
SMARCD1-202ENST00000394963 FAM160B2Q86V87 743 aa17.46■□□□□ 0.39
SMARCD1-202ENST00000394963 FAM84AQ96KN4 292 aa17.46■□□□□ 0.39
SMARCD1-202ENST00000394963 TISP43B9A030 160 aa17.46■□□□□ 0.39
SMARCD1-202ENST00000394963 NCK2O43639 380 aa17.46■□□□□ 0.39
SMARCD1-202ENST00000394963 PADI6Q6TGC4 694 aa17.46■□□□□ 0.39
SMARCD1-202ENST00000394963 NYAP1Q6ZVC0 841 aa17.46■□□□□ 0.39
SMARCD1-202ENST00000394963 IRF2BP1Q8IU81 584 aa17.46■□□□□ 0.39
SMARCD1-202ENST00000394963 FAM186BQ8IYM0 893 aa17.46■□□□□ 0.39
SMARCD1-202ENST00000394963 GUF1Q8N442 669 aaKnown RBP17.46■□□□□ 0.39
SMARCD1-202ENST00000394963 GOLGA6L1Q8N7Z2 621 aa17.46■□□□□ 0.39
SMARCD1-202ENST00000394963 U2AF1L4Q8WU68 220 aaKnown RBP17.46■□□□□ 0.39
SMARCD1-202ENST00000394963 SAAL1Q96ER3 474 aa17.46■□□□□ 0.39
SMARCD1-202ENST00000394963 CHORDC1Q9UHD1 332 aaPredicted RBP17.46■□□□□ 0.39
SMARCD1-202ENST00000394963 ZHX1Q9UKY1 873 aaPredicted RBP17.46■□□□□ 0.39
SMARCD1-202ENST00000394963 EPHB6O15197 1021 aa17.46■□□□□ 0.39
SMARCD1-202ENST00000394963 VCAM1P19320 739 aa17.46■□□□□ 0.39
SMARCD1-202ENST00000394963 PAFAH1B1P43034 410 aa17.46■□□□□ 0.39
SMARCD1-202ENST00000394963 LMBRD2Q68DH5 695 aaPredicted RBP17.46■□□□□ 0.39
SMARCD1-202ENST00000394963 SWSAP1Q6NVH7 229 aa17.46■□□□□ 0.39
SMARCD1-202ENST00000394963 TATDN1Q6P1N9 297 aa17.46■□□□□ 0.39
SMARCD1-202ENST00000394963 TRPM4Q8TD43 1214 aa17.46■□□□□ 0.39
SMARCD1-202ENST00000394963 MAGEF1Q9HAY2 307 aa17.46■□□□□ 0.39
SMARCD1-202ENST00000394963 LARSQ9P2J5 1176 aaKnown RBP17.46■□□□□ 0.39
SMARCD1-202ENST00000394963 ANKFY1Q9P2R3 1169 aa17.46■□□□□ 0.39
SMARCD1-202ENST00000394963 PVALEFA0A1B0GWK0 134 aa17.45■□□□□ 0.38
SMARCD1-202ENST00000394963 LRRIQ4A6NIV6 560 aa17.45■□□□□ 0.38
SMARCD1-202ENST00000394963 M0R2N6 131 aa17.45■□□□□ 0.38
SMARCD1-202ENST00000394963 ZNF185O15231 689 aa17.45■□□□□ 0.38
SMARCD1-202ENST00000394963 VPS36Q86VN1 386 aa17.45■□□□□ 0.38
SMARCD1-202ENST00000394963 IFT81Q8WYA0 676 aa17.45■□□□□ 0.38
SMARCD1-202ENST00000394963 NUP58Q9BVL2 599 aa17.45■□□□□ 0.38
SMARCD1-202ENST00000394963 GCNT4Q9P109 453 aa17.45■□□□□ 0.38
SMARCD1-202ENST00000394963 TNRC6CQ9HCJ0 1690 aaKnown RBP17.45■□□□□ 0.38
SMARCD1-202ENST00000394963 SNHG28P0DPA3 235 aa17.45■□□□□ 0.38
SMARCD1-202ENST00000394963 PRELPP51888 382 aa17.45■□□□□ 0.38
SMARCD1-202ENST00000394963 NAA35Q5VZE5 725 aa17.45■□□□□ 0.38
SMARCD1-202ENST00000394963 PPM1KQ8N3J5 372 aa17.45■□□□□ 0.38
SMARCD1-202ENST00000394963 PROCA1Q8NCQ7 364 aaPredicted RBP17.45■□□□□ 0.38
SMARCD1-202ENST00000394963 AGBL3Q8NEM8 1001 aa17.45■□□□□ 0.38
SMARCD1-202ENST00000394963 PKNOX2Q96KN3 472 aa17.45■□□□□ 0.38
SMARCD1-202ENST00000394963 NACC1Q96RE7 527 aa17.45■□□□□ 0.38
SMARCD1-202ENST00000394963 ARFGAP3Q9NP61 516 aa17.45■□□□□ 0.38
SMARCD1-202ENST00000394963 MYH6P13533 1939 aa17.45■□□□□ 0.38
SMARCD1-202ENST00000394963 KRT5P13647 590 aa17.45■□□□□ 0.38
SMARCD1-202ENST00000394963 SMARCA1P28370 1054 aa17.45■□□□□ 0.38
SMARCD1-202ENST00000394963 SSTR3P32745 418 aaPredicted RBP17.45■□□□□ 0.38
SMARCD1-202ENST00000394963 KIF11P52732 1056 aa17.45■□□□□ 0.38
SMARCD1-202ENST00000394963 ZBED6P86452 979 aa17.45■□□□□ 0.38
SMARCD1-202ENST00000394963 HLTFQ14527 1009 aaKnown RBP eCLIP17.45■□□□□ 0.38
SMARCD1-202ENST00000394963 MCF2L2Q86YR7 1114 aa17.45■□□□□ 0.38
SMARCD1-202ENST00000394963 SPATA20Q8TB22 786 aa17.45■□□□□ 0.38
SMARCD1-202ENST00000394963 FAM20AQ96MK3 541 aa17.45■□□□□ 0.38
SMARCD1-202ENST00000394963 NR3C1P04150 777 aa17.44■□□□□ 0.38
SMARCD1-202ENST00000394963 MYL1P05976 194 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms