RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 WDR64B1ANS9 1081 aa13.17□□□□□ -0.3
SIN3A-202ENST00000394947 GOLGA8NF8WBI6 632 aa13.17□□□□□ -0.3
SIN3A-202ENST00000394947 SGSM2O43147 1006 aa13.17□□□□□ -0.3
SIN3A-202ENST00000394947 ARHGEF9O43307 516 aa13.17□□□□□ -0.3
SIN3A-202ENST00000394947 CHEK2O96017 543 aa13.17□□□□□ -0.3
SIN3A-202ENST00000394947 ABCB5Q2M3G0 1257 aa13.17□□□□□ -0.3
SIN3A-202ENST00000394947 FAM26FQ5R3K3 315 aa13.17□□□□□ -0.3
SIN3A-202ENST00000394947 IFT43Q96FT9 208 aa13.17□□□□□ -0.3
SIN3A-202ENST00000394947 KLC2Q9H0B6 622 aa13.17□□□□□ -0.3
SIN3A-202ENST00000394947 LMTK3Q96Q04 1460 aa13.17□□□□□ -0.3
SIN3A-202ENST00000394947 M0R2C6 588 aa13.17□□□□□ -0.3
SIN3A-202ENST00000394947 SRGAP2O75044 1071 aa13.17□□□□□ -0.3
SIN3A-202ENST00000394947 SCN4BQ8IWT1 228 aa13.17□□□□□ -0.3
SIN3A-202ENST00000394947 ST13P4Q8IZP2 240 aaPredicted RBP13.17□□□□□ -0.3
SIN3A-202ENST00000394947 BBOF1Q8ND07 529 aa13.17□□□□□ -0.3
SIN3A-202ENST00000394947 OR6B3Q8NGW1 331 aa13.17□□□□□ -0.3
SIN3A-202ENST00000394947 AFG1LQ8WV93 481 aa13.17□□□□□ -0.3
SIN3A-202ENST00000394947 CAPN10Q9HC96 672 aa13.17□□□□□ -0.3
SIN3A-202ENST00000394947 SAYSD1Q9NPB0 183 aa13.17□□□□□ -0.3
SIN3A-202ENST00000394947 ASXL1Q8IXJ9 1541 aa13.17□□□□□ -0.3
SIN3A-202ENST00000394947 ADCY3O60266 1144 aa13.17□□□□□ -0.3
SIN3A-202ENST00000394947 HNRNPCP07910 306 aaKnown RBP eCLIP13.17□□□□□ -0.3
SIN3A-202ENST00000394947 RNF219Q5W0B1 726 aaPredicted RBP13.17□□□□□ -0.3
SIN3A-202ENST00000394947 NUGGCQ68CJ6 796 aa13.17□□□□□ -0.3
SIN3A-202ENST00000394947 MKL2Q9ULH7 1088 aa13.17□□□□□ -0.3
SIN3A-202ENST00000394947 GRIN2BQ13224 1484 aa13.16□□□□□ -0.3
SIN3A-202ENST00000394947 ZBED1O96006 694 aa13.16□□□□□ -0.3
SIN3A-202ENST00000394947 ELF1P32519 619 aa13.16□□□□□ -0.3
SIN3A-202ENST00000394947 DYNLL1P63167 89 aaKnown RBP13.16□□□□□ -0.3
SIN3A-202ENST00000394947 OCA2Q04671 838 aa13.16□□□□□ -0.3
SIN3A-202ENST00000394947 GCKRQ14397 625 aa13.16□□□□□ -0.3
SIN3A-202ENST00000394947 NBPF10Q6P3W6 841 aaKnown RBP13.16□□□□□ -0.3
SIN3A-202ENST00000394947 ALG13Q9NP73 1137 aaKnown RBP13.16□□□□□ -0.3
SIN3A-202ENST00000394947 ORC4O43929 436 aa13.16□□□□□ -0.3
SIN3A-202ENST00000394947 SCG2P13521 617 aa13.16□□□□□ -0.3
SIN3A-202ENST00000394947 TFDP1Q14186 410 aa13.16□□□□□ -0.3
SIN3A-202ENST00000394947 MIS18BP1Q6P0N0 1132 aa13.16□□□□□ -0.3
SIN3A-202ENST00000394947 CCNYL1Q8N7R7 359 aa13.16□□□□□ -0.3
SIN3A-202ENST00000394947 SH3KBP1Q96B97 665 aa13.16□□□□□ -0.3
SIN3A-202ENST00000394947 UPF3AQ9H1J1 476 aaKnown RBP13.16□□□□□ -0.3
SIN3A-202ENST00000394947 STX18Q9P2W9 335 aaKnown RBP13.16□□□□□ -0.3
SIN3A-202ENST00000394947 ZMYM6O95789 1325 aa13.16□□□□□ -0.3
SIN3A-202ENST00000394947 PSMC2P35998 433 aaKnown RBP13.16□□□□□ -0.3
SIN3A-202ENST00000394947 CTTNQ14247 550 aaKnown RBP13.16□□□□□ -0.3
SIN3A-202ENST00000394947 LRRC24Q50LG9 513 aa13.16□□□□□ -0.3
SIN3A-202ENST00000394947 RASSF3Q86WH2 238 aa13.16□□□□□ -0.3
SIN3A-202ENST00000394947 GPT2Q8TD30 523 aa13.16□□□□□ -0.3
SIN3A-202ENST00000394947 PIK3R5Q8WYR1 880 aa13.16□□□□□ -0.3
SIN3A-202ENST00000394947 PALD1Q9ULE6 856 aa13.16□□□□□ -0.3
SIN3A-202ENST00000394947 ABT1Q9ULW3 272 aaKnown RBP13.16□□□□□ -0.3
SIN3A-202ENST00000394947 TCP1P17987 556 aaKnown RBP13.16□□□□□ -0.3
SIN3A-202ENST00000394947 C1orf146Q5VVC0 180 aa13.16□□□□□ -0.3
SIN3A-202ENST00000394947 ZNF280CQ8ND82 737 aa13.16□□□□□ -0.3
SIN3A-202ENST00000394947 FSD1LQ9BXM9 530 aa13.16□□□□□ -0.3
SIN3A-202ENST00000394947 DBNDD1Q9H9R9 158 aa13.16□□□□□ -0.3
SIN3A-202ENST00000394947 RAD18Q9NS91 495 aa13.16□□□□□ -0.3
SIN3A-202ENST00000394947 UBA6A0AVT1 1052 aaPredicted RBP13.16□□□□□ -0.3
SIN3A-202ENST00000394947 PSMA2P25787 234 aa13.16□□□□□ -0.3
SIN3A-202ENST00000394947 CTSWP56202 376 aa13.16□□□□□ -0.3
SIN3A-202ENST00000394947 BEND6Q5SZJ8 279 aaPredicted RBP13.16□□□□□ -0.3
SIN3A-202ENST00000394947 FAM182BQ5T319 152 aa13.16□□□□□ -0.3
SIN3A-202ENST00000394947 EPAS1Q99814 870 aa13.16□□□□□ -0.3
SIN3A-202ENST00000394947 TRIM15Q9C019 465 aa13.16□□□□□ -0.3
SIN3A-202ENST00000394947 NFU1Q9UMS0 254 aa13.16□□□□□ -0.3
SIN3A-202ENST00000394947 CA4P22748 312 aa13.15□□□□□ -0.3
SIN3A-202ENST00000394947 ACTN3Q08043 901 aaPredicted RBP13.15□□□□□ -0.3
SIN3A-202ENST00000394947 NME3Q13232 169 aa13.15□□□□□ -0.3
SIN3A-202ENST00000394947 GPR101Q96P66 508 aaPredicted RBP13.15□□□□□ -0.3
SIN3A-202ENST00000394947 NDFIP2Q9NV92 336 aa13.15□□□□□ -0.3
SIN3A-202ENST00000394947 GDAQ9Y2T3 454 aa13.15□□□□□ -0.3
SIN3A-202ENST00000394947 DDIASQ8IXT1 998 aa13.15□□□□□ -0.3
SIN3A-202ENST00000394947 FLCNQ8NFG4 579 aa13.15□□□□□ -0.3
SIN3A-202ENST00000394947 MROH5Q6ZUA9 1318 aa13.15□□□□□ -0.3
SIN3A-202ENST00000394947 CCDC78A2IDD5 438 aa13.15□□□□□ -0.3
SIN3A-202ENST00000394947 TTI1O43156 1089 aa13.15□□□□□ -0.3
SIN3A-202ENST00000394947 MYBP10242 640 aa13.15□□□□□ -0.3
SIN3A-202ENST00000394947 NUMBP49757 651 aa13.15□□□□□ -0.3
SIN3A-202ENST00000394947 LMNB2Q03252 620 aa13.15□□□□□ -0.3
SIN3A-202ENST00000394947 NFX1Q12986 1120 aaKnown RBP13.15□□□□□ -0.3
SIN3A-202ENST00000394947 PWP1Q13610 501 aa13.15□□□□□ -0.3
SIN3A-202ENST00000394947 TRIM60Q495X7 471 aa13.15□□□□□ -0.3
SIN3A-202ENST00000394947 ZBTB18Q99592 522 aa13.15□□□□□ -0.3
SIN3A-202ENST00000394947 EGFL8Q99944 293 aa13.15□□□□□ -0.3
SIN3A-202ENST00000394947 NGRNQ9NPE2 291 aaKnown RBP13.15□□□□□ -0.3
SIN3A-202ENST00000394947 PSDA5PKW4 1024 aaPredicted RBP13.15□□□□□ -0.3
SIN3A-202ENST00000394947 GYG2O15488 501 aa13.15□□□□□ -0.3
SIN3A-202ENST00000394947 SCRN1Q12765 414 aa13.15□□□□□ -0.3
SIN3A-202ENST00000394947 CRLF3Q8IUI8 442 aa13.15□□□□□ -0.3
SIN3A-202ENST00000394947 FANCBQ8NB91 859 aa13.15□□□□□ -0.3
SIN3A-202ENST00000394947 SERPINI1Q99574 410 aa13.15□□□□□ -0.3
SIN3A-202ENST00000394947 NHEJ1Q9H9Q4 299 aaPredicted RBP13.15□□□□□ -0.3
SIN3A-202ENST00000394947 TXLNGQ9NUQ3 528 aa13.15□□□□□ -0.3
SIN3A-202ENST00000394947 EIF3CLB5ME19 914 aaKnown RBP13.15□□□□□ -0.3
SIN3A-202ENST00000394947 KDM1AO60341 852 aa13.15□□□□□ -0.3
SIN3A-202ENST00000394947 CCDC157Q569K6 752 aa13.15□□□□□ -0.3
SIN3A-202ENST00000394947 AARS2Q5JTZ9 985 aaKnown RBP13.15□□□□□ -0.3
SIN3A-202ENST00000394947 ZMYND12Q9H0C1 365 aa13.15□□□□□ -0.3
SIN3A-202ENST00000394947 SLC8A2Q9UPR5 921 aa13.15□□□□□ -0.3
SIN3A-202ENST00000394947 NSD2O96028 1365 aa13.14□□□□□ -0.31
SIN3A-202ENST00000394947 E5RI56 91 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms