RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 CASKIN2Q8WXE0 1202 aa9.62□□□□□ -0.87
RTN4-206ENST00000394611 SEC16BQ96JE7 1060 aa9.62□□□□□ -0.87
RTN4-206ENST00000394611 NUP58Q9BVL2 599 aa9.62□□□□□ -0.87
RTN4-206ENST00000394611 ALG13Q9NP73 1137 aaKnown RBP9.62□□□□□ -0.87
RTN4-206ENST00000394611 ATP6V0A2Q9Y487 856 aa9.62□□□□□ -0.87
RTN4-206ENST00000394611 GSG1L2A8MUP6 293 aa9.61□□□□□ -0.87
RTN4-206ENST00000394611 BAG2O95816 211 aa9.61□□□□□ -0.87
RTN4-206ENST00000394611 CALCOCO2Q13137 446 aa9.61□□□□□ -0.87
RTN4-206ENST00000394611 CALCRLQ16602 461 aa9.61□□□□□ -0.87
RTN4-206ENST00000394611 HIPK4Q8NE63 616 aa9.61□□□□□ -0.87
RTN4-206ENST00000394611 ELMO3Q96BJ8 720 aa9.61□□□□□ -0.87
RTN4-206ENST00000394611 GOLGB1Q14789 3259 aaKnown RBP9.61□□□□□ -0.87
RTN4-206ENST00000394611 AP1G2O75843 785 aa9.61□□□□□ -0.87
RTN4-206ENST00000394611 PCCAP05165 728 aaPredicted RBP9.61□□□□□ -0.87
RTN4-206ENST00000394611 SSTR3P32745 418 aaPredicted RBP9.61□□□□□ -0.87
RTN4-206ENST00000394611 CTSWP56202 376 aa9.61□□□□□ -0.87
RTN4-206ENST00000394611 UBXN2AP68543 259 aa9.61□□□□□ -0.87
RTN4-206ENST00000394611 PABPC4Q13310 644 aaKnown RBP eCLIP9.61□□□□□ -0.872e-7■■■□□ 16.8
RTN4-206ENST00000394611 SRBD1Q8N5C6 995 aaKnown RBP9.61□□□□□ -0.87
RTN4-206ENST00000394611 GLIS3Q8NEA6 775 aa9.61□□□□□ -0.87
RTN4-206ENST00000394611 DTX3LQ8TDB6 740 aa9.61□□□□□ -0.87
RTN4-206ENST00000394611 LPIN2Q92539 896 aa9.61□□□□□ -0.87
RTN4-206ENST00000394611 RAB34Q9BZG1 259 aa9.61□□□□□ -0.87
RTN4-206ENST00000394611 KCNG1Q9UIX4 513 aa9.61□□□□□ -0.87
RTN4-206ENST00000394611 DCDC2CA8MYV0 355 aa9.61□□□□□ -0.87
RTN4-206ENST00000394611 NKRFO15226 690 aaKnown RBP eCLIP9.61□□□□□ -0.87
RTN4-206ENST00000394611 HIP1RO75146 1068 aa9.61□□□□□ -0.87
RTN4-206ENST00000394611 ITGA4P13612 1032 aa9.61□□□□□ -0.87
RTN4-206ENST00000394611 KRT15P19012 456 aa9.61□□□□□ -0.87
RTN4-206ENST00000394611 ADAM9Q13443 819 aa9.61□□□□□ -0.87
RTN4-206ENST00000394611 HAUS3Q68CZ6 603 aa9.61□□□□□ -0.87
RTN4-206ENST00000394611 FAM114A2Q9NRY5 505 aa9.61□□□□□ -0.87
RTN4-206ENST00000394611 SALL1Q9NSC2 1324 aa9.61□□□□□ -0.87
RTN4-206ENST00000394611 SART1O43290 800 aaKnown RBP9.6□□□□□ -0.87
RTN4-206ENST00000394611 GCNT3O95395 438 aa9.6□□□□□ -0.87
RTN4-206ENST00000394611 IFNB1P01574 187 aa9.6□□□□□ -0.87
RTN4-206ENST00000394611 MSH2P43246 934 aa9.6□□□□□ -0.87
RTN4-206ENST00000394611 QPCTQ16769 361 aa9.6□□□□□ -0.87
RTN4-206ENST00000394611 PRR5LQ6MZQ0 368 aa9.6□□□□□ -0.87
RTN4-206ENST00000394611 GJB7Q6PEY0 223 aa9.6□□□□□ -0.87
RTN4-206ENST00000394611 TPTE2Q6XPS3 522 aa9.6□□□□□ -0.87
RTN4-206ENST00000394611 C3orf67Q6ZVT6 689 aa9.6□□□□□ -0.87
RTN4-206ENST00000394611 CNBD1Q8NA66 436 aa9.6□□□□□ -0.87
RTN4-206ENST00000394611 TBCKQ8TEA7 893 aa9.6□□□□□ -0.87
RTN4-206ENST00000394611 SH2D3AQ9BRG2 576 aa9.6□□□□□ -0.87
RTN4-206ENST00000394611 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.6□□□□□ -0.87
RTN4-206ENST00000394611 ABCC12Q96J65 1359 aa9.6□□□□□ -0.87
RTN4-206ENST00000394611 CASZ1Q86V15 1759 aa9.6□□□□□ -0.87
RTN4-206ENST00000394611 AGPSO00116 658 aa9.6□□□□□ -0.87
RTN4-206ENST00000394611 TBCAO75347 108 aaKnown RBP9.6□□□□□ -0.87
RTN4-206ENST00000394611 KCNJ1P48048 391 aa9.6□□□□□ -0.87
RTN4-206ENST00000394611 NONOQ15233 471 aaKnown RBP eCLIP9.6□□□□□ -0.878e-7■■□□□ 13.4
RTN4-206ENST00000394611 CAPRIN2Q6IMN6 1127 aaKnown RBP9.6□□□□□ -0.87
RTN4-206ENST00000394611 CCDC84Q86UT8 332 aaPredicted RBP9.6□□□□□ -0.87
RTN4-206ENST00000394611 FMO2Q99518 471 aa9.6□□□□□ -0.87
RTN4-206ENST00000394611 OSBPL1AQ9BXW6 950 aa9.6□□□□□ -0.87
RTN4-206ENST00000394611 ALDH8A1Q9H2A2 487 aaPredicted RBP9.6□□□□□ -0.87
RTN4-206ENST00000394611 KIAA1024Q9UPX6 916 aa9.6□□□□□ -0.87
RTN4-206ENST00000394611 KLRF2D3W0D1 207 aa9.6□□□□□ -0.87
RTN4-206ENST00000394611 SORBS3O60504 671 aa9.6□□□□□ -0.87
RTN4-206ENST00000394611 CCNE1P24864 410 aa9.6□□□□□ -0.87
RTN4-206ENST00000394611 EEF1GP26641 437 aaKnown RBP9.6□□□□□ -0.87
RTN4-206ENST00000394611 KIF22Q14807 665 aa9.6□□□□□ -0.87
RTN4-206ENST00000394611 SYCP2LQ5T4T6 812 aa9.6□□□□□ -0.87
RTN4-206ENST00000394611 C6orf50Q9HD87 102 aa9.6□□□□□ -0.87
RTN4-206ENST00000394611 FAM217BQ9NTX9 383 aaPredicted RBP9.6□□□□□ -0.87
RTN4-206ENST00000394611 ARHGAP20Q9P2F6 1191 aa9.6□□□□□ -0.87
RTN4-206ENST00000394611 UTYO14607 1347 aa9.6□□□□□ -0.87
RTN4-206ENST00000394611 RGL2O15211 777 aa9.6□□□□□ -0.87
RTN4-206ENST00000394611 OR52Z1P0C646 297 aa9.6□□□□□ -0.87
RTN4-206ENST00000394611 CHN1P15882 459 aa9.6□□□□□ -0.87
RTN4-206ENST00000394611 PLCG2P16885 1265 aa9.6□□□□□ -0.87
RTN4-206ENST00000394611 NR2F2P24468 414 aa9.6□□□□□ -0.87
RTN4-206ENST00000394611 RANBP1P43487 201 aa9.6□□□□□ -0.87
RTN4-206ENST00000394611 PSMD2Q13200 908 aa9.6□□□□□ -0.87
RTN4-206ENST00000394611 NTRK3Q16288 839 aa9.6□□□□□ -0.87
RTN4-206ENST00000394611 LRRC36Q1X8D7 754 aa9.6□□□□□ -0.87
RTN4-206ENST00000394611 VWA3BQ502W6 1294 aa9.6□□□□□ -0.87
RTN4-206ENST00000394611 SLC30A10Q6XR72 485 aa9.6□□□□□ -0.87
RTN4-206ENST00000394611 GPBP1Q86WP2 473 aa9.6□□□□□ -0.87
RTN4-206ENST00000394611 RNF26Q9BY78 433 aaPredicted RBP9.6□□□□□ -0.87
RTN4-206ENST00000394611 NOD2Q9HC29 1040 aa9.6□□□□□ -0.87
RTN4-206ENST00000394611 FGFR1OP2Q9NVK5 253 aa9.6□□□□□ -0.87
RTN4-206ENST00000394611 NKIRAS1Q9NYS0 192 aa9.6□□□□□ -0.87
RTN4-206ENST00000394611 MTRF1LQ9UGC7 380 aaKnown RBP9.6□□□□□ -0.87
RTN4-206ENST00000394611 CTNNA2P26232 953 aa9.59□□□□□ -0.87
RTN4-206ENST00000394611 SLC8A1P32418 973 aa9.59□□□□□ -0.87
RTN4-206ENST00000394611 PPP2R2AP63151 447 aa9.59□□□□□ -0.87
RTN4-206ENST00000394611 ALS2CLQ60I27 953 aa9.59□□□□□ -0.87
RTN4-206ENST00000394611 DPH6Q7L8W6 267 aa9.59□□□□□ -0.87
RTN4-206ENST00000394611 SRRM1Q8IYB3 904 aaKnown RBP9.59□□□□□ -0.87
RTN4-206ENST00000394611 SCYL3Q8IZE3 742 aa9.59□□□□□ -0.87
RTN4-206ENST00000394611 MYOCDQ8IZQ8 938 aa9.59□□□□□ -0.87
RTN4-206ENST00000394611 SLC16A10Q8TF71 515 aa9.59□□□□□ -0.87
RTN4-206ENST00000394611 JDP2Q8WYK2 163 aa9.59□□□□□ -0.87
RTN4-206ENST00000394611 DCTN4Q9UJW0 460 aa9.59□□□□□ -0.87
RTN4-206ENST00000394611 CAPN11Q9UMQ6 739 aa9.59□□□□□ -0.87
RTN4-206ENST00000394611 TRIM33Q9UPN9 1127 aa9.59□□□□□ -0.87
RTN4-206ENST00000394611 MYH10P35580 1976 aa9.59□□□□□ -0.87
RTN4-206ENST00000394611 COL24A1Q17RW2 1714 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms