RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 CFAP157Q5JU67 520 aa13.6□□□□□ -0.23
SLC28A1-203ENST00000394573 LMBRD2Q68DH5 695 aaPredicted RBP13.6□□□□□ -0.23
SLC28A1-203ENST00000394573 OTUD6AQ7L8S5 288 aa13.6□□□□□ -0.23
SLC28A1-203ENST00000394573 MICU3Q86XE3 530 aa13.6□□□□□ -0.23
SLC28A1-203ENST00000394573 IRF2BP1Q8IU81 584 aa13.6□□□□□ -0.23
SLC28A1-203ENST00000394573 ATP8B4Q8TF62 1192 aa13.6□□□□□ -0.23
SLC28A1-203ENST00000394573 DHTKD1Q96HY7 919 aaPredicted RBP13.6□□□□□ -0.23
SLC28A1-203ENST00000394573 FAM192AQ9GZU8 254 aa13.6□□□□□ -0.23
SLC28A1-203ENST00000394573 ADGRB3O60242 1522 aa13.6□□□□□ -0.23
SLC28A1-203ENST00000394573 LAMA4Q16363 1823 aa13.6□□□□□ -0.23
SLC28A1-203ENST00000394573 SIGLEC16A6NMB1 481 aa13.6□□□□□ -0.23
SLC28A1-203ENST00000394573 FOXO6A8MYZ6 492 aa13.6□□□□□ -0.23
SLC28A1-203ENST00000394573 P4HA2O15460 535 aa13.6□□□□□ -0.23
SLC28A1-203ENST00000394573 KIF11P52732 1056 aa13.6□□□□□ -0.23
SLC28A1-203ENST00000394573 PHEXP78562 749 aa13.6□□□□□ -0.23
SLC28A1-203ENST00000394573 GSTM4Q03013 218 aa13.6□□□□□ -0.23
SLC28A1-203ENST00000394573 KHDC1Q4VXA5 237 aaKnown RBP13.6□□□□□ -0.23
SLC28A1-203ENST00000394573 LIN52Q52LA3 116 aa13.6□□□□□ -0.23
SLC28A1-203ENST00000394573 KANK3Q6NY19 840 aa13.6□□□□□ -0.23
SLC28A1-203ENST00000394573 GET4Q7L5D6 327 aaPredicted RBP13.6□□□□□ -0.23
SLC28A1-203ENST00000394573 DAAM2Q86T65 1068 aa13.6□□□□□ -0.23
SLC28A1-203ENST00000394573 GDAP1Q8TB36 358 aa13.6□□□□□ -0.23
SLC28A1-203ENST00000394573 GATA6Q92908 595 aa13.6□□□□□ -0.23
SLC28A1-203ENST00000394573 LTV1Q96GA3 475 aaPredicted RBP13.6□□□□□ -0.23
SLC28A1-203ENST00000394573 PUS3Q9BZE2 481 aaKnown RBP13.6□□□□□ -0.23
SLC28A1-203ENST00000394573 SUCLA2Q9P2R7 463 aaPredicted RBP13.6□□□□□ -0.23
SLC28A1-203ENST00000394573 DBNLQ9UJU6 430 aaKnown RBP13.6□□□□□ -0.23
SLC28A1-203ENST00000394573 NKRFO15226 690 aaKnown RBP eCLIP13.59□□□□□ -0.23
SLC28A1-203ENST00000394573 HSPD1P10809 573 aaKnown RBP13.59□□□□□ -0.23
SLC28A1-203ENST00000394573 HDAC4P56524 1084 aa13.59□□□□□ -0.23
SLC28A1-203ENST00000394573 NR5A1Q13285 461 aa13.59□□□□□ -0.23
SLC28A1-203ENST00000394573 ITGA7Q13683 1181 aa13.59□□□□□ -0.23
SLC28A1-203ENST00000394573 TRIM29Q14134 588 aa13.59□□□□□ -0.23
SLC28A1-203ENST00000394573 RFWD3Q6PCD5 774 aa13.59□□□□□ -0.23
SLC28A1-203ENST00000394573 ZNF662Q6ZS27 426 aa13.59□□□□□ -0.23
SLC28A1-203ENST00000394573 TMC3Q7Z5M5 1100 aa13.59□□□□□ -0.23
SLC28A1-203ENST00000394573 CENPTQ96BT3 561 aa13.59□□□□□ -0.23
SLC28A1-203ENST00000394573 COG3Q96JB2 828 aa13.59□□□□□ -0.23
SLC28A1-203ENST00000394573 JPH4Q96JJ6 628 aa13.59□□□□□ -0.23
SLC28A1-203ENST00000394573 FAM114A2Q9NRY5 505 aa13.59□□□□□ -0.23
SLC28A1-203ENST00000394573 PAG1Q9NWQ8 432 aa13.59□□□□□ -0.23
SLC28A1-203ENST00000394573 CHPF2Q9P2E5 772 aa13.59□□□□□ -0.23
SLC28A1-203ENST00000394573 KIF20BQ96Q89 1820 aa13.59□□□□□ -0.23
SLC28A1-203ENST00000394573 LGALS16A8MUM7 142 aa13.59□□□□□ -0.23
SLC28A1-203ENST00000394573 PALMO75781 387 aa13.59□□□□□ -0.23
SLC28A1-203ENST00000394573 UNC5CO95185 931 aa13.59□□□□□ -0.23
SLC28A1-203ENST00000394573 LYNP07948 512 aa13.59□□□□□ -0.23
SLC28A1-203ENST00000394573 VHLP40337 213 aa13.59□□□□□ -0.23
SLC28A1-203ENST00000394573 MAGEA1P43355 309 aa13.59□□□□□ -0.23
SLC28A1-203ENST00000394573 PSMD7P51665 324 aa13.59□□□□□ -0.23
SLC28A1-203ENST00000394573 CCR3P51677 355 aa13.59□□□□□ -0.23
SLC28A1-203ENST00000394573 USP11P51784 963 aa13.59□□□□□ -0.23
SLC28A1-203ENST00000394573 PMS1P54277 932 aaKnown RBP13.59□□□□□ -0.23
SLC28A1-203ENST00000394573 GFPT1Q06210 699 aaPredicted RBP13.59□□□□□ -0.23
SLC28A1-203ENST00000394573 RCN1Q15293 331 aa13.59□□□□□ -0.23
SLC28A1-203ENST00000394573 PKN1Q16512 942 aa13.59□□□□□ -0.23
SLC28A1-203ENST00000394573 GRAMD4Q6IC98 578 aa13.59□□□□□ -0.23
SLC28A1-203ENST00000394573 VSIG1Q86XK7 387 aa13.59□□□□□ -0.23
SLC28A1-203ENST00000394573 PDCD7Q8N8D1 485 aaKnown RBP13.59□□□□□ -0.23
SLC28A1-203ENST00000394573 ANKRD42Q8N9B4 389 aa13.59□□□□□ -0.23
SLC28A1-203ENST00000394573 HAPLN3Q96S86 360 aa13.59□□□□□ -0.23
SLC28A1-203ENST00000394573 CELF4Q9BZC1 486 aaKnown RBP13.59□□□□□ -0.23
SLC28A1-203ENST00000394573 RXFP1Q9HBX9 757 aa13.59□□□□□ -0.23
SLC28A1-203ENST00000394573 GPCPD1Q9NPB8 672 aa13.59□□□□□ -0.23
SLC28A1-203ENST00000394573 ARHGAP20Q9P2F6 1191 aa13.59□□□□□ -0.23
SLC28A1-203ENST00000394573 PDP2Q9P2J9 529 aa13.59□□□□□ -0.23
SLC28A1-203ENST00000394573 COMMD3-BMI1R4GMX3 469 aa13.59□□□□□ -0.23
SLC28A1-203ENST00000394573 PALLDQ8WX93 1383 aa13.58□□□□□ -0.24
SLC28A1-203ENST00000394573 NCKAP5LQ9HCH0 1330 aa13.58□□□□□ -0.24
SLC28A1-203ENST00000394573 SPTLC1O15269 473 aa13.58□□□□□ -0.24
SLC28A1-203ENST00000394573 KRT38O76015 456 aa13.58□□□□□ -0.24
SLC28A1-203ENST00000394573 ITGA6P23229 1130 aa13.58□□□□□ -0.24
SLC28A1-203ENST00000394573 MYBPC2Q14324 1141 aa13.58□□□□□ -0.24
SLC28A1-203ENST00000394573 VWA3BQ502W6 1294 aa13.58□□□□□ -0.24
SLC28A1-203ENST00000394573 EPHA10Q5JZY3 1008 aa13.58□□□□□ -0.24
SLC28A1-203ENST00000394573 SH2D4BQ5SQS7 431 aa13.58□□□□□ -0.24
SLC28A1-203ENST00000394573 KBTBD2Q8IY47 623 aa13.58□□□□□ -0.24
SLC28A1-203ENST00000394573 CEP70Q8NHQ1 597 aa13.58□□□□□ -0.24
SLC28A1-203ENST00000394573 NCSTNQ92542 709 aa13.58□□□□□ -0.24
SLC28A1-203ENST00000394573 HSPBAP1Q96EW2 488 aa13.58□□□□□ -0.24
SLC28A1-203ENST00000394573 AMACRQ9UHK6 382 aa13.58□□□□□ -0.24
SLC28A1-203ENST00000394573 SPO11Q9Y5K1 396 aa13.58□□□□□ -0.24
SLC28A1-203ENST00000394573 KIF1BO60333 1816 aa13.58□□□□□ -0.24
SLC28A1-203ENST00000394573 MST1RQ04912 1400 aa13.58□□□□□ -0.24
SLC28A1-203ENST00000394573 HTR3EA5X5Y0 456 aa13.58□□□□□ -0.24
SLC28A1-203ENST00000394573 E7ENQ6 273 aa13.58□□□□□ -0.24
SLC28A1-203ENST00000394573 KRT36O76013 467 aa13.58□□□□□ -0.24
SLC28A1-203ENST00000394573 OAS1P00973 400 aaKnown RBP13.58□□□□□ -0.24
SLC28A1-203ENST00000394573 VAV1P15498 845 aa13.58□□□□□ -0.24
SLC28A1-203ENST00000394573 SLC1A4P43007 532 aa13.58□□□□□ -0.24
SLC28A1-203ENST00000394573 MMP13P45452 471 aa13.58□□□□□ -0.24
SLC28A1-203ENST00000394573 MTTPP55157 894 aa13.58□□□□□ -0.24
SLC28A1-203ENST00000394573 TNNC1P63316 161 aa13.58□□□□□ -0.24
SLC28A1-203ENST00000394573 SPAG1Q07617 926 aa13.58□□□□□ -0.24
SLC28A1-203ENST00000394573 C6orf183Q5T699 404 aa13.58□□□□□ -0.24
SLC28A1-203ENST00000394573 ISLR2Q6UXK2 745 aa13.58□□□□□ -0.24
SLC28A1-203ENST00000394573 NEK9Q8TD19 979 aa13.58□□□□□ -0.24
SLC28A1-203ENST00000394573 TEKT1Q969V4 418 aa13.58□□□□□ -0.24
SLC28A1-203ENST00000394573 RASAL2Q9UJF2 1139 aa13.58□□□□□ -0.24
SLC28A1-203ENST00000394573 DBR1Q9UK59 544 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms