RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 SCFD1Q8WVM8 642 aa16.6■□□□□ 0.25
CCT4-201ENST00000394440 NACC1Q96RE7 527 aa16.6■□□□□ 0.25
CCT4-201ENST00000394440 PKD2L1Q9P0L9 805 aa16.6■□□□□ 0.25
CCT4-201ENST00000394440 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.6■□□□□ 0.25
CCT4-201ENST00000394440 ATP9AO75110 1047 aa16.6■□□□□ 0.25
CCT4-201ENST00000394440 GOLGA8FQ08AF8 430 aa16.6■□□□□ 0.25
CCT4-201ENST00000394440 GOLGA8DPQ0D2H9 430 aa16.6■□□□□ 0.25
CCT4-201ENST00000394440 PLS1Q14651 629 aa16.6■□□□□ 0.25
CCT4-201ENST00000394440 RIOX2Q8IUF8 465 aa16.6■□□□□ 0.25
CCT4-201ENST00000394440 ZBTB39O15060 712 aa16.59■□□□□ 0.25
CCT4-201ENST00000394440 RGS20O76081 388 aa16.59■□□□□ 0.25
CCT4-201ENST00000394440 TTLL12Q14166 644 aaPredicted RBP16.59■□□□□ 0.25
CCT4-201ENST00000394440 EPM2AIP1Q7L775 607 aaPredicted RBP16.59■□□□□ 0.25
CCT4-201ENST00000394440 BANK1Q8NDB2 785 aa16.59■□□□□ 0.25
CCT4-201ENST00000394440 TBC1D7Q9P0N9 293 aa16.59■□□□□ 0.25
CCT4-201ENST00000394440 MAGEC2Q9UBF1 373 aaPredicted RBP16.59■□□□□ 0.25
CCT4-201ENST00000394440 AGTPBP1Q9UPW5 1226 aa16.59■□□□□ 0.25
CCT4-201ENST00000394440 RSPH10B2B2RC85 870 aa16.59■□□□□ 0.25
CCT4-201ENST00000394440 MAFGO15525 162 aa16.59■□□□□ 0.25
CCT4-201ENST00000394440 P4HBP07237 508 aaKnown RBP16.59■□□□□ 0.25
CCT4-201ENST00000394440 RSPH10BP0C881 870 aa16.59■□□□□ 0.25
CCT4-201ENST00000394440 CEP135Q66GS9 1140 aa16.59■□□□□ 0.25
CCT4-201ENST00000394440 ARMC9Q7Z3E5 817 aa16.59■□□□□ 0.25
CCT4-201ENST00000394440 SFR1Q86XK3 245 aa16.59■□□□□ 0.25
CCT4-201ENST00000394440 EEF2KMTQ96G04 330 aa16.59■□□□□ 0.25
CCT4-201ENST00000394440 TUBGCP2Q9BSJ2 902 aa16.59■□□□□ 0.25
CCT4-201ENST00000394440 KCTD10Q9H3F6 313 aa16.59■□□□□ 0.25
CCT4-201ENST00000394440 NMRK2Q9NPI5 230 aa16.59■□□□□ 0.25
CCT4-201ENST00000394440 KCND2Q9NZV8 630 aa16.59■□□□□ 0.25
CCT4-201ENST00000394440 A0A1W2PQC6 194 aa16.58■□□□□ 0.25
CCT4-201ENST00000394440 TESPA1A2RU30 521 aaPredicted RBP16.58■□□□□ 0.25
CCT4-201ENST00000394440 LYPLA2O95372 231 aa16.58■□□□□ 0.25
CCT4-201ENST00000394440 CASP5P51878 434 aa16.58■□□□□ 0.25
CCT4-201ENST00000394440 OPTNQ96CV9 577 aa16.58■□□□□ 0.25
CCT4-201ENST00000394440 ASCC2Q9H1I8 757 aaPredicted RBP16.58■□□□□ 0.25
CCT4-201ENST00000394440 OLFML3Q9NRN5 406 aa16.58■□□□□ 0.25
CCT4-201ENST00000394440 ASTN1O14525 1302 aa16.58■□□□□ 0.24
CCT4-201ENST00000394440 NKRFO15226 690 aaKnown RBP eCLIP16.58■□□□□ 0.24
CCT4-201ENST00000394440 PEX10O60683 326 aa16.58■□□□□ 0.24
CCT4-201ENST00000394440 CNMDO75829 334 aa16.58■□□□□ 0.24
CCT4-201ENST00000394440 KIF20AO95235 890 aa16.58■□□□□ 0.24
CCT4-201ENST00000394440 GYPCP04921 128 aa16.58■□□□□ 0.24
CCT4-201ENST00000394440 MIIPQ5JXC2 388 aa16.58■□□□□ 0.24
CCT4-201ENST00000394440 ZC3H3Q8IXZ2 948 aaKnown RBP16.58■□□□□ 0.24
CCT4-201ENST00000394440 ZSWIM4Q9H7M6 989 aa16.58■□□□□ 0.24
CCT4-201ENST00000394440 FBXO40Q9UH90 709 aa16.58■□□□□ 0.24
CCT4-201ENST00000394440 ARID2Q68CP9 1835 aa16.58■□□□□ 0.24
CCT4-201ENST00000394440 NRDCO43847 1150 aa16.57■□□□□ 0.24
CCT4-201ENST00000394440 STAM2O75886 525 aa16.57■□□□□ 0.24
CCT4-201ENST00000394440 CCNE2O96020 404 aa16.57■□□□□ 0.24
CCT4-201ENST00000394440 POTEJP0CG39 1038 aa16.57■□□□□ 0.24
CCT4-201ENST00000394440 ZNF131P52739 623 aa16.57■□□□□ 0.24
CCT4-201ENST00000394440 ADKP55263 362 aaKnown RBP16.57■□□□□ 0.24
CCT4-201ENST00000394440 HERVK_113P62684 666 aa16.57■□□□□ 0.24
CCT4-201ENST00000394440 IRX3P78415 501 aaPredicted RBP16.57■□□□□ 0.24
CCT4-201ENST00000394440 RBL2Q08999 1139 aa16.57■□□□□ 0.24
CCT4-201ENST00000394440 BMT2Q1RMZ1 405 aa16.57■□□□□ 0.24
CCT4-201ENST00000394440 E4F1Q66K89 784 aaPredicted RBP16.57■□□□□ 0.24
CCT4-201ENST00000394440 NLRX1Q86UT6 975 aa16.57■□□□□ 0.24
CCT4-201ENST00000394440 TSG101Q99816 390 aa16.57■□□□□ 0.24
CCT4-201ENST00000394440 SPATC1LQ9H0A9 340 aa16.57■□□□□ 0.24
CCT4-201ENST00000394440 PFASO15067 1338 aa16.57■□□□□ 0.24
CCT4-201ENST00000394440 USP27XA6NNY8 438 aa16.57■□□□□ 0.24
CCT4-201ENST00000394440 FGFR1OPO95684 399 aaKnown RBP16.57■□□□□ 0.24
CCT4-201ENST00000394440 KCNA2P16389 499 aa16.57■□□□□ 0.24
CCT4-201ENST00000394440 HSPA6P17066 643 aa16.57■□□□□ 0.24
CCT4-201ENST00000394440 GAP43P17677 238 aa16.57■□□□□ 0.24
CCT4-201ENST00000394440 GJA5P36382 358 aa16.57■□□□□ 0.24
CCT4-201ENST00000394440 KRT76Q01546 638 aa16.57■□□□□ 0.24
CCT4-201ENST00000394440 UBXN1Q04323 297 aa16.57■□□□□ 0.24
CCT4-201ENST00000394440 CREBRFQ8IUR6 639 aa16.57■□□□□ 0.24
CCT4-201ENST00000394440 DNERQ8NFT8 737 aa16.57■□□□□ 0.24
CCT4-201ENST00000394440 BCAS3Q9H6U6 928 aa16.57■□□□□ 0.24
CCT4-201ENST00000394440 COL4A3BPQ9Y5P4 624 aa16.57■□□□□ 0.24
CCT4-201ENST00000394440 AKR1B15C9JRZ8 316 aaPredicted RBP16.56■□□□□ 0.24
CCT4-201ENST00000394440 MFAP3LO75121 409 aa16.56■□□□□ 0.24
CCT4-201ENST00000394440 TBCAO75347 108 aaKnown RBP16.56■□□□□ 0.24
CCT4-201ENST00000394440 GUCY2CP25092 1073 aa16.56■□□□□ 0.24
CCT4-201ENST00000394440 SFNP31947 248 aa16.56■□□□□ 0.24
CCT4-201ENST00000394440 DNM2P50570 870 aa16.56■□□□□ 0.24
CCT4-201ENST00000394440 JAK3P52333 1124 aa16.56■□□□□ 0.24
CCT4-201ENST00000394440 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.56■□□□□ 0.24
CCT4-201ENST00000394440 CCAR2Q8N163 923 aaKnown RBP16.56■□□□□ 0.24
CCT4-201ENST00000394440 PANX2Q96RD6 677 aa16.56■□□□□ 0.24
CCT4-201ENST00000394440 IWS1Q96ST2 819 aa16.56■□□□□ 0.24
CCT4-201ENST00000394440 SENP7Q9BQF6 1050 aa16.56■□□□□ 0.24
CCT4-201ENST00000394440 ZHX3Q9H4I2 956 aa16.56■□□□□ 0.24
CCT4-201ENST00000394440 ODF2LQ9ULJ1 636 aa16.56■□□□□ 0.24
CCT4-201ENST00000394440 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.56■□□□□ 0.24
CCT4-201ENST00000394440 TOMM70O94826 608 aa16.56■□□□□ 0.24
CCT4-201ENST00000394440 HOXD13P35453 343 aa16.56■□□□□ 0.24
CCT4-201ENST00000394440 QARSP47897 775 aaKnown RBP16.56■□□□□ 0.24
CCT4-201ENST00000394440 FKBP3Q00688 224 aaKnown RBP16.56■□□□□ 0.24
CCT4-201ENST00000394440 TRIM14Q14142 442 aa16.56■□□□□ 0.24
CCT4-201ENST00000394440 GPAT2Q6NUI2 795 aa16.56■□□□□ 0.24
CCT4-201ENST00000394440 PPP4R3CPQ6ZMV5 832 aa16.56■□□□□ 0.24
CCT4-201ENST00000394440 RDM1Q8NG50 284 aa16.56■□□□□ 0.24
CCT4-201ENST00000394440 FIZ1Q96SL8 496 aa16.56■□□□□ 0.24
CCT4-201ENST00000394440 DBR1Q9UK59 544 aaKnown RBP16.56■□□□□ 0.24
CCT4-201ENST00000394440 UNCXA6NJT0 531 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 138.2 ms