RNA–Protein interactions for RNA: ENST00000394180.6

CLDND1-202, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-202ENST00000394180 UBE3CQ15386 1083 aa23.78■■□□□ 1.4
CLDND1-202ENST00000394180 COBLL1Q53SF7 1204 aa23.78■■□□□ 1.4
CLDND1-202ENST00000394180 MEI1Q5TIA1 1274 aa23.78■■□□□ 1.4
CLDND1-202ENST00000394180 LMNTD2Q8IXW0 634 aa23.78■■□□□ 1.4
CLDND1-202ENST00000394180 OXER1Q8TDS5 423 aa23.78■■□□□ 1.4
CLDND1-202ENST00000394180 SEC14L1Q92503 715 aa23.78■■□□□ 1.4
CLDND1-202ENST00000394180 CAND2O75155 1236 aa23.78■■□□□ 1.4
CLDND1-202ENST00000394180 HOXA10P31260 410 aaPredicted RBP23.78■■□□□ 1.4
CLDND1-202ENST00000394180 LONP1P36776 959 aaKnown RBP23.78■■□□□ 1.4
CLDND1-202ENST00000394180 SKIV2L2P42285 1042 aaKnown RBP23.78■■□□□ 1.4
CLDND1-202ENST00000394180 NCALDP61601 193 aa23.78■■□□□ 1.4
CLDND1-202ENST00000394180 ATP11AP98196 1134 aa23.78■■□□□ 1.4
CLDND1-202ENST00000394180 PBKQ96KB5 322 aa23.78■■□□□ 1.4
CLDND1-202ENST00000394180 ARHGEF3Q9NR81 526 aa23.78■■□□□ 1.4
CLDND1-202ENST00000394180 CHCHD3Q9NX63 227 aaKnown RBP23.78■■□□□ 1.4
CLDND1-202ENST00000394180 ATF5Q9Y2D1 282 aaPredicted RBP23.78■■□□□ 1.4
CLDND1-202ENST00000394180 GDAQ9Y2T3 454 aa23.78■■□□□ 1.4
CLDND1-202ENST00000394180 CTNND1O60716 968 aaKnown RBP23.77■■□□□ 1.4
CLDND1-202ENST00000394180 PDE6BP35913 854 aa23.77■■□□□ 1.4
CLDND1-202ENST00000394180 ABL2P42684 1182 aa23.77■■□□□ 1.4
CLDND1-202ENST00000394180 ERVK-9P63128 1117 aa23.77■■□□□ 1.4
CLDND1-202ENST00000394180 LAMB3Q13751 1172 aa23.77■■□□□ 1.4
CLDND1-202ENST00000394180 SCARF1Q14162 830 aa23.77■■□□□ 1.4
CLDND1-202ENST00000394180 HLTFQ14527 1009 aaKnown RBP eCLIP23.77■■□□□ 1.4
CLDND1-202ENST00000394180 SLC16A10Q8TF71 515 aa23.77■■□□□ 1.4
CLDND1-202ENST00000394180 SCFD2Q8WU76 684 aa23.77■■□□□ 1.4
CLDND1-202ENST00000394180 EZH1Q92800 747 aaPredicted RBP23.77■■□□□ 1.4
CLDND1-202ENST00000394180 PGM2Q96G03 612 aa23.77■■□□□ 1.4
CLDND1-202ENST00000394180 ZNF512BQ96KM6 892 aaPredicted RBP23.77■■□□□ 1.4
CLDND1-202ENST00000394180 UBAC1Q9BSL1 405 aa23.77■■□□□ 1.4
CLDND1-202ENST00000394180 CCDC188H7C350 402 aa23.76■■□□□ 1.39
CLDND1-202ENST00000394180 SART1O43290 800 aaKnown RBP23.76■■□□□ 1.39
CLDND1-202ENST00000394180 CCNE1P24864 410 aa23.76■■□□□ 1.39
CLDND1-202ENST00000394180 ADD2P35612 726 aa23.76■■□□□ 1.39
CLDND1-202ENST00000394180 PHKA1P46020 1223 aa23.76■■□□□ 1.39
CLDND1-202ENST00000394180 DYNC1I2Q13409 638 aaKnown RBP23.76■■□□□ 1.39
CLDND1-202ENST00000394180 PI16Q6UXB8 463 aa23.76■■□□□ 1.39
CLDND1-202ENST00000394180 MS4A14Q96JA4 679 aa23.76■■□□□ 1.39
CLDND1-202ENST00000394180 NCK2O43639 380 aa23.76■■□□□ 1.39
CLDND1-202ENST00000394180 COBLO75128 1261 aa23.76■■□□□ 1.39
CLDND1-202ENST00000394180 SMIM24O75264 130 aa23.76■■□□□ 1.39
CLDND1-202ENST00000394180 HOXA7P31268 230 aaPredicted RBP23.76■■□□□ 1.39
CLDND1-202ENST00000394180 MMP13P45452 471 aa23.76■■□□□ 1.39
CLDND1-202ENST00000394180 ALDH5A1P51649 535 aaPredicted RBP23.76■■□□□ 1.39
CLDND1-202ENST00000394180 MAP3K12Q12852 859 aa23.76■■□□□ 1.39
CLDND1-202ENST00000394180 MIIPQ5JXC2 388 aa23.76■■□□□ 1.39
CLDND1-202ENST00000394180 TTC38Q5R3I4 469 aa23.76■■□□□ 1.39
CLDND1-202ENST00000394180 TYW1BQ6NUM6 668 aa23.76■■□□□ 1.39
CLDND1-202ENST00000394180 SYN2Q92777 582 aaPredicted RBP23.76■■□□□ 1.39
CLDND1-202ENST00000394180 MTMR8Q96EF0 704 aa23.76■■□□□ 1.39
CLDND1-202ENST00000394180 MAGEF1Q9HAY2 307 aa23.76■■□□□ 1.39
CLDND1-202ENST00000394180 A0A1B0GUL6 1792 aa23.75■■□□□ 1.39
CLDND1-202ENST00000394180 BTNL10A8MVZ5 291 aa23.75■■□□□ 1.39
CLDND1-202ENST00000394180 UBE2Q2LH0YL09 131 aa23.75■■□□□ 1.39
CLDND1-202ENST00000394180 O00370 1275 aa23.75■■□□□ 1.39
CLDND1-202ENST00000394180 RARAP10276 462 aa23.75■■□□□ 1.39
CLDND1-202ENST00000394180 GNAT1P11488 350 aa23.75■■□□□ 1.39
CLDND1-202ENST00000394180 SLC5A1P13866 664 aa23.75■■□□□ 1.39
CLDND1-202ENST00000394180 NAB2Q15742 525 aa23.75■■□□□ 1.39
CLDND1-202ENST00000394180 C2CD5Q86YS7 1000 aa23.75■■□□□ 1.39
CLDND1-202ENST00000394180 CSGALNACT2Q8N6G5 542 aa23.75■■□□□ 1.39
CLDND1-202ENST00000394180 ACTRT1Q8TDG2 376 aa23.75■■□□□ 1.39
CLDND1-202ENST00000394180 DUSP9Q99956 384 aaKnown RBP23.75■■□□□ 1.39
CLDND1-202ENST00000394180 COL11A2P13942 1736 aaPredicted RBP23.75■■□□□ 1.39
CLDND1-202ENST00000394180 TRIM49BA6NDI0 452 aa23.75■■□□□ 1.39
CLDND1-202ENST00000394180 SPDYE3A6NKU9 549 aa23.75■■□□□ 1.39
CLDND1-202ENST00000394180 SETSIPP0DME0 302 aa23.75■■□□□ 1.39
CLDND1-202ENST00000394180 KLRK1P26718 216 aa23.75■■□□□ 1.39
CLDND1-202ENST00000394180 CHRNA5P30532 468 aa23.75■■□□□ 1.39
CLDND1-202ENST00000394180 ALDH3A1P30838 453 aa23.75■■□□□ 1.39
CLDND1-202ENST00000394180 BNIP1Q12981 228 aa23.75■■□□□ 1.39
CLDND1-202ENST00000394180 TAF11Q15544 211 aa23.75■■□□□ 1.39
CLDND1-202ENST00000394180 ATXN2LQ8WWM7 1075 aaKnown RBP23.75■■□□□ 1.39
CLDND1-202ENST00000394180 PCMTD1Q96MG8 357 aaPredicted RBP23.75■■□□□ 1.39
CLDND1-202ENST00000394180 NOC4LQ9BVI4 516 aaKnown RBP23.75■■□□□ 1.39
CLDND1-202ENST00000394180 BAG3O95817 575 aa23.74■■□□□ 1.39
CLDND1-202ENST00000394180 BCAMP50895 628 aa23.74■■□□□ 1.39
CLDND1-202ENST00000394180 SNX1Q13596 522 aa23.74■■□□□ 1.39
CLDND1-202ENST00000394180 TNFRSF25Q93038 417 aa23.74■■□□□ 1.39
CLDND1-202ENST00000394180 MYL10Q9BUA6 226 aa23.74■■□□□ 1.39
CLDND1-202ENST00000394180 SLITRK6Q9H5Y7 841 aa23.74■■□□□ 1.39
CLDND1-202ENST00000394180 FAM114A2Q9NRY5 505 aa23.74■■□□□ 1.39
CLDND1-202ENST00000394180 FBXL5Q9UKA1 691 aa23.74■■□□□ 1.39
CLDND1-202ENST00000394180 TAOK2Q9UL54 1235 aa23.74■■□□□ 1.39
CLDND1-202ENST00000394180 SIK3Q9Y2K2 1263 aa23.74■■□□□ 1.39
CLDND1-202ENST00000394180 F8VZ95 297 aa23.74■■□□□ 1.39
CLDND1-202ENST00000394180 MAGEA8P43361 318 aa23.74■■□□□ 1.39
CLDND1-202ENST00000394180 ARHGAP22Q7Z5H3 698 aa23.74■■□□□ 1.39
CLDND1-202ENST00000394180 TMC3Q7Z5M5 1100 aa23.74■■□□□ 1.39
CLDND1-202ENST00000394180 CNOT6LQ96LI5 555 aaKnown RBP23.74■■□□□ 1.39
CLDND1-202ENST00000394180 CRAMP1Q96RY5 1269 aa23.74■■□□□ 1.39
CLDND1-202ENST00000394180 ZSWIM5Q9P217 1185 aa23.74■■□□□ 1.39
CLDND1-202ENST00000394180 SALL4Q9UJQ4 1053 aa23.74■■□□□ 1.39
CLDND1-202ENST00000394180 PPFIA2O75334 1257 aa23.73■■□□□ 1.39
CLDND1-202ENST00000394180 OAS1P00973 400 aaKnown RBP23.73■■□□□ 1.39
CLDND1-202ENST00000394180 NUDT17P0C025 328 aa23.73■■□□□ 1.39
CLDND1-202ENST00000394180 IMPDH2P12268 514 aa23.73■■□□□ 1.39
CLDND1-202ENST00000394180 NPR1P16066 1061 aa23.73■■□□□ 1.39
CLDND1-202ENST00000394180 GBP1P32455 592 aa23.73■■□□□ 1.39
CLDND1-202ENST00000394180 PMS1P54277 932 aaKnown RBP23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms