RNA–Protein interactions for RNA: ENST00000393560.5

LAMB1-203, Transcript of laminin subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene LAMB1, Length 2,806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-203ENST00000393560 S100A5P33763 92 aa12.36□□□□□ -0.43
LAMB1-203ENST00000393560 CETN2P41208 172 aa12.36□□□□□ -0.43
LAMB1-203ENST00000393560 TNIP2Q8NFZ5 429 aa12.36□□□□□ -0.43
LAMB1-203ENST00000393560 PARVGQ9HBI0 331 aa12.36□□□□□ -0.43
LAMB1-203ENST00000393560 GTF3C4Q9UKN8 822 aa12.36□□□□□ -0.43
LAMB1-203ENST00000393560 LTN1O94822 1766 aa12.36□□□□□ -0.43
LAMB1-203ENST00000393560 NWD1Q149M9 1564 aa12.36□□□□□ -0.43
LAMB1-203ENST00000393560 TMCC2O75069 709 aa12.36□□□□□ -0.43
LAMB1-203ENST00000393560 PDE5AO76074 875 aa12.36□□□□□ -0.43
LAMB1-203ENST00000393560 KRT16P08779 473 aa12.36□□□□□ -0.43
LAMB1-203ENST00000393560 CYP2C9P11712 490 aa12.36□□□□□ -0.43
LAMB1-203ENST00000393560 ACADSP16219 412 aa12.36□□□□□ -0.43
LAMB1-203ENST00000393560 GNAZP19086 355 aa12.36□□□□□ -0.43
LAMB1-203ENST00000393560 ARFIP2P53365 341 aa12.36□□□□□ -0.43
LAMB1-203ENST00000393560 RALGDSQ12967 914 aa12.36□□□□□ -0.43
LAMB1-203ENST00000393560 STK3Q13188 491 aa12.36□□□□□ -0.43
LAMB1-203ENST00000393560 CHRNA2Q15822 529 aa12.36□□□□□ -0.43
LAMB1-203ENST00000393560 PPP4R3AQ6IN85 833 aa12.36□□□□□ -0.43
LAMB1-203ENST00000393560 MPRIPQ6WCQ1 1025 aa12.36□□□□□ -0.43
LAMB1-203ENST00000393560 PPFIBP1Q86W92 1011 aa12.36□□□□□ -0.43
LAMB1-203ENST00000393560 VSTM4Q8IW00 320 aa12.36□□□□□ -0.43
LAMB1-203ENST00000393560 RAVER1Q8IY67 606 aaKnown RBP12.36□□□□□ -0.43
LAMB1-203ENST00000393560 MMS19Q96T76 1030 aa12.36□□□□□ -0.43
LAMB1-203ENST00000393560 TRIM33Q9UPN9 1127 aa12.36□□□□□ -0.43
LAMB1-203ENST00000393560 NFAT5O94916 1531 aa12.35□□□□□ -0.43
LAMB1-203ENST00000393560 SRRM3A6NNA2 597 aaPredicted RBP12.35□□□□□ -0.43
LAMB1-203ENST00000393560 NOTOA8MTQ0 251 aa12.35□□□□□ -0.43
LAMB1-203ENST00000393560 MAP3K7O43318 606 aa12.35□□□□□ -0.43
LAMB1-203ENST00000393560 TRAPPC3O43617 180 aa12.35□□□□□ -0.43
LAMB1-203ENST00000393560 KCNJ13O60928 360 aa12.35□□□□□ -0.43
LAMB1-203ENST00000393560 TTLL12Q14166 644 aaPredicted RBP12.35□□□□□ -0.43
LAMB1-203ENST00000393560 RCN2Q14257 317 aa12.35□□□□□ -0.43
LAMB1-203ENST00000393560 SLC27A3Q5K4L6 730 aa12.35□□□□□ -0.43
LAMB1-203ENST00000393560 STKLD1Q8NE28 680 aa12.35□□□□□ -0.43
LAMB1-203ENST00000393560 RBM46Q8TBY0 533 aaKnown RBP12.35□□□□□ -0.43
LAMB1-203ENST00000393560 CCDC110Q8TBZ0 833 aa12.35□□□□□ -0.43
LAMB1-203ENST00000393560 NDUFB9Q9Y6M9 179 aa12.35□□□□□ -0.43
LAMB1-203ENST00000393560 SOWAHDA6NJG2 315 aa12.35□□□□□ -0.43
LAMB1-203ENST00000393560 CHGBP05060 677 aa12.35□□□□□ -0.43
LAMB1-203ENST00000393560 ETFBP38117 255 aa12.35□□□□□ -0.43
LAMB1-203ENST00000393560 ITGB3BPQ13352 177 aaPredicted RBP12.35□□□□□ -0.43
LAMB1-203ENST00000393560 HLTFQ14527 1009 aaKnown RBP eCLIP12.35□□□□□ -0.43
LAMB1-203ENST00000393560 ADCK5Q3MIX3 580 aa12.35□□□□□ -0.43
LAMB1-203ENST00000393560 DEPDC1Q5TB30 811 aa12.35□□□□□ -0.43
LAMB1-203ENST00000393560 ZNF530Q6P9A1 599 aaPredicted RBP12.35□□□□□ -0.43
LAMB1-203ENST00000393560 FAM136AQ96C01 138 aa12.35□□□□□ -0.43
LAMB1-203ENST00000393560 CAPZA3Q96KX2 299 aa12.35□□□□□ -0.43
LAMB1-203ENST00000393560 FKBP14Q9NWM8 211 aa12.35□□□□□ -0.43
LAMB1-203ENST00000393560 ZBTB1Q9Y2K1 713 aa12.35□□□□□ -0.43
LAMB1-203ENST00000393560 USP20Q9Y2K6 914 aa12.35□□□□□ -0.43
LAMB1-203ENST00000393560 TRIM17Q9Y577 477 aa12.35□□□□□ -0.43
LAMB1-203ENST00000393560 FBP2O00757 339 aa12.34□□□□□ -0.43
LAMB1-203ENST00000393560 GBP1P32455 592 aa12.34□□□□□ -0.43
LAMB1-203ENST00000393560 MSH2P43246 934 aa12.34□□□□□ -0.43
LAMB1-203ENST00000393560 PAK2Q13177 524 aa12.34□□□□□ -0.43
LAMB1-203ENST00000393560 MUM1Q2TAK8 710 aa12.34□□□□□ -0.43
LAMB1-203ENST00000393560 PDCD4Q53EL6 469 aaKnown RBP12.34□□□□□ -0.43
LAMB1-203ENST00000393560 BRSK1Q8TDC3 778 aa12.34□□□□□ -0.43
LAMB1-203ENST00000393560 ERP27Q96DN0 273 aa12.34□□□□□ -0.43
LAMB1-203ENST00000393560 TCF12Q99081 682 aa12.34□□□□□ -0.43
LAMB1-203ENST00000393560 TYW1Q9NV66 732 aaKnown RBP12.34□□□□□ -0.43
LAMB1-203ENST00000393560 STK39Q9UEW8 545 aa12.34□□□□□ -0.43
LAMB1-203ENST00000393560 GIT1Q9Y2X7 761 aa12.34□□□□□ -0.43
LAMB1-203ENST00000393560 KANSL1LA0AUZ9 987 aa12.34□□□□□ -0.43
LAMB1-203ENST00000393560 BTBD11A6QL63 1104 aa12.34□□□□□ -0.43
LAMB1-203ENST00000393560 AP3B1O00203 1094 aa12.34□□□□□ -0.43
LAMB1-203ENST00000393560 TMOD1P28289 359 aa12.34□□□□□ -0.43
LAMB1-203ENST00000393560 LONRF1Q17RB8 773 aa12.34□□□□□ -0.43
LAMB1-203ENST00000393560 C3orf62Q6ZUJ4 267 aa12.34□□□□□ -0.43
LAMB1-203ENST00000393560 VPS36Q86VN1 386 aa12.34□□□□□ -0.43
LAMB1-203ENST00000393560 SPATA24Q86W54 205 aa12.34□□□□□ -0.43
LAMB1-203ENST00000393560 NPLOC4Q8TAT6 608 aa12.34□□□□□ -0.43
LAMB1-203ENST00000393560 ACMSDQ8TDX5 336 aa12.34□□□□□ -0.43
LAMB1-203ENST00000393560 ATP8B4Q8TF62 1192 aa12.34□□□□□ -0.43
LAMB1-203ENST00000393560 HSPBAP1Q96EW2 488 aa12.34□□□□□ -0.43
LAMB1-203ENST00000393560 DDX50Q9BQ39 737 aaKnown RBP12.34□□□□□ -0.43
LAMB1-203ENST00000393560 BHMT2Q9H2M3 363 aa12.34□□□□□ -0.43
LAMB1-203ENST00000393560 PA2G4Q9UQ80 394 aaKnown RBP12.34□□□□□ -0.43
LAMB1-203ENST00000393560 GPC6Q9Y625 555 aaPredicted RBP12.34□□□□□ -0.43
LAMB1-203ENST00000393560 TLL2Q9Y6L7 1015 aa12.34□□□□□ -0.43
LAMB1-203ENST00000393560 ZNF335Q9H4Z2 1342 aaPredicted RBP12.34□□□□□ -0.43
LAMB1-203ENST00000393560 STRCP1A6NGW2 1772 aa12.34□□□□□ -0.43
LAMB1-203ENST00000393560 POTEJP0CG39 1038 aa12.33□□□□□ -0.43
LAMB1-203ENST00000393560 PRLRP16471 622 aa12.33□□□□□ -0.43
LAMB1-203ENST00000393560 RRM1P23921 792 aa12.33□□□□□ -0.43
LAMB1-203ENST00000393560 ATP8B2P98198 1209 aa12.33□□□□□ -0.43
LAMB1-203ENST00000393560 FLIIQ13045 1269 aa12.33□□□□□ -0.43
LAMB1-203ENST00000393560 POLA2Q14181 598 aa12.33□□□□□ -0.43
LAMB1-203ENST00000393560 NR1D2Q14995 579 aa12.33□□□□□ -0.43
LAMB1-203ENST00000393560 CTC1Q2NKJ3 1217 aa12.33□□□□□ -0.43
LAMB1-203ENST00000393560 ARL13BQ3SXY8 428 aa12.33□□□□□ -0.43
LAMB1-203ENST00000393560 GLE1Q53GS7 698 aaKnown RBP12.33□□□□□ -0.43
LAMB1-203ENST00000393560 BOLA3Q53S33 107 aa12.33□□□□□ -0.43
LAMB1-203ENST00000393560 TMTC1Q8IUR5 882 aa12.33□□□□□ -0.43
LAMB1-203ENST00000393560 CCDC197Q8NCU1 140 aa12.33□□□□□ -0.43
LAMB1-203ENST00000393560 ASIC4Q96FT7 647 aa12.33□□□□□ -0.43
LAMB1-203ENST00000393560 FERD3LQ96RJ6 166 aa12.33□□□□□ -0.43
LAMB1-203ENST00000393560 NUP85Q9BW27 656 aa12.33□□□□□ -0.43
LAMB1-203ENST00000393560 MUC3BQ9H195 1237 aa12.33□□□□□ -0.43
LAMB1-203ENST00000393560 FAM114A2Q9NRY5 505 aa12.33□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms