RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 POLD4Q9HCU8 107 aa9.6□□□□□ -0.87
TDP1-203ENST00000393454 WRAP73Q9P2S5 460 aaPredicted RBP9.6□□□□□ -0.87
TDP1-203ENST00000393454 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.6□□□□□ -0.87
TDP1-203ENST00000393454 ARHGEF35A5YM69 484 aa9.6□□□□□ -0.87
TDP1-203ENST00000393454 SOWAHBA6NEL2 793 aa9.6□□□□□ -0.87
TDP1-203ENST00000393454 WDR64B1ANS9 1081 aa9.6□□□□□ -0.87
TDP1-203ENST00000393454 B4DLN1 442 aa9.6□□□□□ -0.87
TDP1-203ENST00000393454 TBCAO75347 108 aaKnown RBP9.6□□□□□ -0.87
TDP1-203ENST00000393454 RGS20O76081 388 aa9.6□□□□□ -0.87
TDP1-203ENST00000393454 SFNP31947 248 aa9.6□□□□□ -0.87
TDP1-203ENST00000393454 QARSP47897 775 aaKnown RBP9.6□□□□□ -0.87
TDP1-203ENST00000393454 CCNA1P78396 465 aa9.6□□□□□ -0.87
TDP1-203ENST00000393454 FSTL1Q12841 308 aa9.6□□□□□ -0.87
TDP1-203ENST00000393454 CCDC144BQ3MJ40 725 aa9.6□□□□□ -0.87
TDP1-203ENST00000393454 FILIP1LQ4L180 1135 aa9.6□□□□□ -0.87
TDP1-203ENST00000393454 CDKAL1Q5VV42 579 aa9.6□□□□□ -0.87
TDP1-203ENST00000393454 RINT1Q6NUQ1 792 aa9.6□□□□□ -0.87
TDP1-203ENST00000393454 ANKRD23Q86SG2 305 aa9.6□□□□□ -0.87
TDP1-203ENST00000393454 GPRC5AQ8NFJ5 357 aa9.6□□□□□ -0.87
TDP1-203ENST00000393454 CCDC43Q96MW1 224 aaKnown RBP9.6□□□□□ -0.87
TDP1-203ENST00000393454 MPHOSPH6Q99547 160 aaKnown RBP9.6□□□□□ -0.87
TDP1-203ENST00000393454 MROH8Q9H579 483 aa9.6□□□□□ -0.87
TDP1-203ENST00000393454 MAGEC2Q9UBF1 373 aaPredicted RBP9.6□□□□□ -0.87
TDP1-203ENST00000393454 SPATA31C2B4DYI2 1134 aa9.59□□□□□ -0.87
TDP1-203ENST00000393454 KCNJ18B7U540 433 aa9.59□□□□□ -0.87
TDP1-203ENST00000393454 FAM13AO94988 1023 aa9.59□□□□□ -0.87
TDP1-203ENST00000393454 ITGBL1O95965 494 aaPredicted RBP9.59□□□□□ -0.87
TDP1-203ENST00000393454 CCNE2O96020 404 aa9.59□□□□□ -0.87
TDP1-203ENST00000393454 ZBTB48P10074 688 aaPredicted RBP9.59□□□□□ -0.87
TDP1-203ENST00000393454 KCNA2P16389 499 aa9.59□□□□□ -0.87
TDP1-203ENST00000393454 KCNJ12Q14500 433 aa9.59□□□□□ -0.87
TDP1-203ENST00000393454 PTPN21Q16825 1174 aa9.59□□□□□ -0.87
TDP1-203ENST00000393454 COBLL1Q53SF7 1204 aa9.59□□□□□ -0.87
TDP1-203ENST00000393454 ANKRD40Q6AI12 368 aa9.59□□□□□ -0.87
TDP1-203ENST00000393454 ZNF746Q6NUN9 644 aaPredicted RBP9.59□□□□□ -0.87
TDP1-203ENST00000393454 MYOCDQ8IZQ8 938 aa9.59□□□□□ -0.87
TDP1-203ENST00000393454 GUF1Q8N442 669 aaKnown RBP9.59□□□□□ -0.87
TDP1-203ENST00000393454 CSGALNACT2Q8N6G5 542 aa9.59□□□□□ -0.87
TDP1-203ENST00000393454 ANKRD13CQ8N6S4 541 aa9.59□□□□□ -0.87
TDP1-203ENST00000393454 FAM133AQ8N9E0 248 aa9.59□□□□□ -0.87
TDP1-203ENST00000393454 CTAGE1Q96RT6 745 aa9.59□□□□□ -0.87
TDP1-203ENST00000393454 JPH1Q9HDC5 661 aaPredicted RBP9.59□□□□□ -0.87
TDP1-203ENST00000393454 ZKSCAN5Q9Y2L8 839 aa9.59□□□□□ -0.87
TDP1-203ENST00000393454 SLC45A1Q9Y2W3 748 aa9.59□□□□□ -0.87
TDP1-203ENST00000393454 ASTN1O14525 1302 aa9.59□□□□□ -0.87
TDP1-203ENST00000393454 DOCK5Q9H7D0 1870 aa9.59□□□□□ -0.87
TDP1-203ENST00000393454 SFI1A8K8P3 1242 aa9.59□□□□□ -0.87
TDP1-203ENST00000393454 RSPH10B2B2RC85 870 aa9.59□□□□□ -0.87
TDP1-203ENST00000393454 RSPH10BP0C881 870 aa9.59□□□□□ -0.87
TDP1-203ENST00000393454 ZNF157P51786 506 aaPredicted RBP9.59□□□□□ -0.87
TDP1-203ENST00000393454 PSMC5P62195 406 aa9.59□□□□□ -0.87
TDP1-203ENST00000393454 SPAG1Q07617 926 aa9.59□□□□□ -0.87
TDP1-203ENST00000393454 EHHADHQ08426 723 aa9.59□□□□□ -0.87
TDP1-203ENST00000393454 TTI2Q6NXR4 508 aa9.59□□□□□ -0.87
TDP1-203ENST00000393454 EEPD1Q7L9B9 569 aa9.59□□□□□ -0.87
TDP1-203ENST00000393454 SFR1Q86XK3 245 aa9.59□□□□□ -0.87
TDP1-203ENST00000393454 FAM43AQ8N2R8 423 aa9.59□□□□□ -0.87
TDP1-203ENST00000393454 GLIS3Q8NEA6 775 aa9.59□□□□□ -0.87
TDP1-203ENST00000393454 NOC3LQ8WTT2 800 aaKnown RBP9.59□□□□□ -0.87
TDP1-203ENST00000393454 TSG101Q99816 390 aa9.59□□□□□ -0.87
TDP1-203ENST00000393454 PORCNQ9H237 461 aa9.59□□□□□ -0.87
TDP1-203ENST00000393454 SEMA6BQ9H3T3 888 aa9.59□□□□□ -0.87
TDP1-203ENST00000393454 THAP9Q9H5L6 903 aa9.59□□□□□ -0.87
TDP1-203ENST00000393454 BCAS3Q9H6U6 928 aa9.59□□□□□ -0.87
TDP1-203ENST00000393454 EFCC1Q9HA90 598 aa9.59□□□□□ -0.87
TDP1-203ENST00000393454 SLC9A2Q9UBY0 812 aa9.59□□□□□ -0.87
TDP1-203ENST00000393454 PCDHA10Q9Y5I2 948 aa9.59□□□□□ -0.87
TDP1-203ENST00000393454 COL4A3BPQ9Y5P4 624 aa9.59□□□□□ -0.87
TDP1-203ENST00000393454 TRPM7Q96QT4 1865 aa9.58□□□□□ -0.88
TDP1-203ENST00000393454 ZNFX1Q9P2E3 1918 aaKnown RBP9.58□□□□□ -0.88
TDP1-203ENST00000393454 FRMD3A2A2Y4 597 aa9.58□□□□□ -0.88
TDP1-203ENST00000393454 PES1O00541 588 aaKnown RBP9.58□□□□□ -0.88
TDP1-203ENST00000393454 KIF20AO95235 890 aa9.58□□□□□ -0.88
TDP1-203ENST00000393454 PSAPP07602 524 aa9.58□□□□□ -0.88
TDP1-203ENST00000393454 GCLCP48506 637 aaPredicted RBP9.58□□□□□ -0.88
TDP1-203ENST00000393454 KRT31Q15323 416 aa9.58□□□□□ -0.88
TDP1-203ENST00000393454 UGCGQ16739 394 aa9.58□□□□□ -0.88
TDP1-203ENST00000393454 TCP11X2Q5H9J9 407 aa9.58□□□□□ -0.88
TDP1-203ENST00000393454 CENPPQ6IPU0 288 aa9.58□□□□□ -0.88
TDP1-203ENST00000393454 C1orf186Q6ZWK4 172 aa9.58□□□□□ -0.88
TDP1-203ENST00000393454 CYFIP1Q7L576 1253 aa9.58□□□□□ -0.88
TDP1-203ENST00000393454 VSTM4Q8IW00 320 aa9.58□□□□□ -0.88
TDP1-203ENST00000393454 NELFCDQ8IXH7 590 aa9.58□□□□□ -0.88
TDP1-203ENST00000393454 SMAP1Q8IYB5 467 aaPredicted RBP9.58□□□□□ -0.88
TDP1-203ENST00000393454 MYCT1Q8N699 235 aa9.58□□□□□ -0.88
TDP1-203ENST00000393454 SHCBP1Q8NEM2 672 aa9.58□□□□□ -0.88
TDP1-203ENST00000393454 RDM1Q8NG50 284 aa9.58□□□□□ -0.88
TDP1-203ENST00000393454 EEF2KMTQ96G04 330 aa9.58□□□□□ -0.88
TDP1-203ENST00000393454 DUSP9Q99956 384 aaKnown RBP9.58□□□□□ -0.88
TDP1-203ENST00000393454 FGFBP2Q9BYJ0 223 aa9.58□□□□□ -0.88
TDP1-203ENST00000393454 VPS16Q9H269 839 aa9.58□□□□□ -0.88
TDP1-203ENST00000393454 MRPL44Q9H9J2 332 aaKnown RBP9.58□□□□□ -0.88
TDP1-203ENST00000393454 TAB2Q9NYJ8 693 aa9.58□□□□□ -0.88
TDP1-203ENST00000393454 IMPACTQ9P2X3 320 aa9.58□□□□□ -0.88
TDP1-203ENST00000393454 GABBR1Q9UBS5 961 aa9.58□□□□□ -0.88
TDP1-203ENST00000393454 NFASCO94856 1347 aa9.58□□□□□ -0.88
TDP1-203ENST00000393454 LOXHD1Q8IVV2 1947 aa9.58□□□□□ -0.88
TDP1-203ENST00000393454 A0A1B0GTH6 734 aa9.57□□□□□ -0.88
TDP1-203ENST00000393454 N4BP3O15049 544 aa9.57□□□□□ -0.88
TDP1-203ENST00000393454 GAP43P17677 238 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms