RNA–Protein interactions for RNA: ENST00000392632.6

UBR3-202, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-202ENST00000392632 SLC12A1Q13621 1099 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 PTPAQ15257 358 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 EZH2Q15910 746 aaKnown RBP4.28□□□□□ -1.72
UBR3-202ENST00000392632 TTC31Q49AM3 519 aaPredicted RBP4.28□□□□□ -1.72
UBR3-202ENST00000392632 FAM47AQ5JRC9 791 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 C10orf76Q5T2E6 689 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 RWDD4Q6NW29 188 aaKnown RBP4.28□□□□□ -1.72
UBR3-202ENST00000392632 DARS2Q6PI48 645 aaKnown RBP4.28□□□□□ -1.72
UBR3-202ENST00000392632 ARHGEF25Q86VW2 580 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 TTC30BQ8N4P2 665 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 TMEM35BQ8NCS4 154 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 ZNF496Q96IT1 587 aaPredicted RBP4.28□□□□□ -1.72
UBR3-202ENST00000392632 VPS50Q96JG6 964 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 TNIP3Q96KP6 325 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 XAB2Q9HCS7 855 aaKnown RBP4.28□□□□□ -1.72
UBR3-202ENST00000392632 PSD3Q9NYI0 1048 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 SAR1BQ9Y6B6 198 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.28□□□□□ -1.72
UBR3-202ENST00000392632 A0A1B0GW55 424 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 POTEB3A0JP26 581 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 E5RI56 91 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 VAMP4O75379 141 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 ASMTLO95671 621 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 ATP1A1P05023 1023 aaKnown RBP4.28□□□□□ -1.72
UBR3-202ENST00000392632 GSNP06396 782 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 APOA4P06727 396 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 HIST1H2AGP0C0S8 130 aaPredicted RBP4.28□□□□□ -1.72
UBR3-202ENST00000392632 DUX4L2P0CJ85 424 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 DUX4L3P0CJ86 424 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 DUX4L4P0CJ87 422 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 DUX4L5P0CJ88 424 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 DUX4L6P0CJ89 424 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 DUX4L7P0CJ90 424 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 SKIP12755 728 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 MX2P20592 715 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 HIST1H2ADP20671 130 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 SFNP31947 248 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 CTNNA1P35221 906 aaKnown RBP4.28□□□□□ -1.72
UBR3-202ENST00000392632 GTF2A1P52655 376 aaPredicted RBP4.28□□□□□ -1.72
UBR3-202ENST00000392632 FKBP3Q00688 224 aaKnown RBP4.28□□□□□ -1.72
UBR3-202ENST00000392632 WHAMMP3Q1A5X7 153 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 TRIM60Q495X7 471 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 PREPLQ4J6C6 727 aaPredicted RBP4.28□□□□□ -1.72
UBR3-202ENST00000392632 POTEBQ6S5H4 581 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 CLEC4GQ6UXB4 293 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 UNC5CLQ8IV45 518 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 SEPT12Q8IYM1 358 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 IFNL3Q8IZI9 196 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 GJA10Q969M2 543 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 HIST1H2AHQ96KK5 128 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 HIST1H2AJQ99878 128 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 H2AFJQ9BTM1 129 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 MSTO1Q9BUK6 570 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 FSD1LQ9BXM9 530 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 CALN1Q9BXU9 219 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 KLC2Q9H0B6 622 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 PARVGQ9HBI0 331 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 SYTL2Q9HCH5 934 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 FGFR1OP2Q9NVK5 253 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 RNF14Q9UBS8 474 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 DUX4Q9UBX2 424 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 TJP2Q9UDY2 1190 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 TNKSO95271 1327 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 IQGAP2Q13576 1575 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 KPNA7A9QM74 516 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 GOLGA8SH3BPF8 625 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 KCNK3O14649 394 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 SLC27A2O14975 620 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 KRT37O76014 449 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 MT-ND3P03897 115 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 MMP10P09238 476 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 EEF1GP26641 437 aaKnown RBP4.28□□□□□ -1.72
UBR3-202ENST00000392632 MAP4P27816 1152 aaKnown RBP4.28□□□□□ -1.72
UBR3-202ENST00000392632 TECP42680 631 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 SKOR1P84550 965 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 CYP4A11Q02928 519 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 CHRNDQ07001 517 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 ART3Q13508 389 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 TYW1BQ6NUM6 668 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 PPP4R3CPQ6ZMV5 832 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 ADAT2Q7Z6V5 191 aaKnown RBP4.28□□□□□ -1.72
UBR3-202ENST00000392632 DDX42Q86XP3 938 aaKnown RBP eCLIP4.28□□□□□ -1.72
UBR3-202ENST00000392632 NOSTRINQ8IVI9 506 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 RNF168Q8IYW5 571 aaPredicted RBP4.28□□□□□ -1.72
UBR3-202ENST00000392632 KRT78Q8N1N4 520 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 ANKRD42Q8N9B4 389 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 KCTD6Q8NC69 237 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 TTC8Q8TAM2 541 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 LARP4BQ92615 738 aaKnown RBP4.28□□□□□ -1.72
UBR3-202ENST00000392632 ZNF653Q96CK0 615 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 NLRP4Q96MN2 994 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 ORAI2Q96SN7 254 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 MXD3Q9BW11 206 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 GPR108Q9NPR9 543 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 ABCF3Q9NUQ8 709 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 SCHIP1Q9P0W5 487 aaPredicted RBP4.28□□□□□ -1.72
UBR3-202ENST00000392632 VPS54Q9P1Q0 977 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 HDAC6Q9UBN7 1215 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 POLR3AO14802 1390 aaPredicted RBP4.27□□□□□ -1.73
UBR3-202ENST00000392632 RPAP1Q9BWH6 1393 aaPredicted RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms