RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 KRT76Q01546 638 aa12.7□□□□□ -0.38
SMARCAL1-203ENST00000392128 RAD51AP2Q09MP3 1159 aa12.7□□□□□ -0.38
SMARCAL1-203ENST00000392128 PTPN21Q16825 1174 aa12.7□□□□□ -0.38
SMARCAL1-203ENST00000392128 C1orf186Q6ZWK4 172 aa12.7□□□□□ -0.38
SMARCAL1-203ENST00000392128 GLIS3Q8NEA6 775 aa12.7□□□□□ -0.38
SMARCAL1-203ENST00000392128 ZSWIM4Q9H7M6 989 aa12.7□□□□□ -0.38
SMARCAL1-203ENST00000392128 TAB2Q9NYJ8 693 aa12.7□□□□□ -0.38
SMARCAL1-203ENST00000392128 NRDCO43847 1150 aa12.7□□□□□ -0.38
SMARCAL1-203ENST00000392128 ATP9AO75110 1047 aa12.7□□□□□ -0.38
SMARCAL1-203ENST00000392128 CNMDO75829 334 aa12.7□□□□□ -0.38
SMARCAL1-203ENST00000392128 LYPLA2O95372 231 aa12.7□□□□□ -0.38
SMARCAL1-203ENST00000392128 POTEJP0CG39 1038 aa12.7□□□□□ -0.38
SMARCAL1-203ENST00000392128 SFNP31947 248 aa12.7□□□□□ -0.38
SMARCAL1-203ENST00000392128 JAK3P52333 1124 aa12.7□□□□□ -0.38
SMARCAL1-203ENST00000392128 LRRC41Q15345 812 aa12.7□□□□□ -0.38
SMARCAL1-203ENST00000392128 ZCWPW2Q504Y3 356 aa12.7□□□□□ -0.38
SMARCAL1-203ENST00000392128 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.7□□□□□ -0.38
SMARCAL1-203ENST00000392128 ANKRD35Q8N283 1001 aa12.7□□□□□ -0.38
SMARCAL1-203ENST00000392128 BANK1Q8NDB2 785 aa12.7□□□□□ -0.38
SMARCAL1-203ENST00000392128 CCDC112Q8NEF3 446 aa12.7□□□□□ -0.38
SMARCAL1-203ENST00000392128 RDM1Q8NG50 284 aa12.7□□□□□ -0.38
SMARCAL1-203ENST00000392128 CDHR1Q96JP9 859 aa12.7□□□□□ -0.38
SMARCAL1-203ENST00000392128 TSG101Q99816 390 aa12.7□□□□□ -0.38
SMARCAL1-203ENST00000392128 VPS16Q9H269 839 aa12.7□□□□□ -0.38
SMARCAL1-203ENST00000392128 TBCAO75347 108 aaKnown RBP12.69□□□□□ -0.38
SMARCAL1-203ENST00000392128 RGS20O76081 388 aa12.69□□□□□ -0.38
SMARCAL1-203ENST00000392128 GAP43P17677 238 aa12.69□□□□□ -0.38
SMARCAL1-203ENST00000392128 OSBPP22059 807 aa12.69□□□□□ -0.38
SMARCAL1-203ENST00000392128 COPB2P35606 906 aa12.69□□□□□ -0.38
SMARCAL1-203ENST00000392128 GJA5P36382 358 aa12.69□□□□□ -0.38
SMARCAL1-203ENST00000392128 SNAPC2Q13487 334 aa12.69□□□□□ -0.38
SMARCAL1-203ENST00000392128 MAP1SQ66K74 1059 aaPredicted RBP12.69□□□□□ -0.38
SMARCAL1-203ENST00000392128 GPAT2Q6NUI2 795 aa12.69□□□□□ -0.38
SMARCAL1-203ENST00000392128 C17orf53Q8N3J3 647 aaPredicted RBP12.69□□□□□ -0.38
SMARCAL1-203ENST00000392128 SCFD1Q8WVM8 642 aa12.69□□□□□ -0.38
SMARCAL1-203ENST00000392128 CNOT6LQ96LI5 555 aaKnown RBP12.69□□□□□ -0.38
SMARCAL1-203ENST00000392128 SENP7Q9BQF6 1050 aa12.69□□□□□ -0.38
SMARCAL1-203ENST00000392128 FGFBP2Q9BYJ0 223 aa12.69□□□□□ -0.38
SMARCAL1-203ENST00000392128 TBC1D7Q9P0N9 293 aa12.69□□□□□ -0.38
SMARCAL1-203ENST00000392128 TCEAL9Q9UHQ7 104 aa12.69□□□□□ -0.38
SMARCAL1-203ENST00000392128 COL4A3BPQ9Y5P4 624 aa12.69□□□□□ -0.38
SMARCAL1-203ENST00000392128 MYH11P35749 1972 aa12.69□□□□□ -0.38
SMARCAL1-203ENST00000392128 LGALS16A8MUM7 142 aa12.69□□□□□ -0.38
SMARCAL1-203ENST00000392128 WDR64B1ANS9 1081 aa12.69□□□□□ -0.38
SMARCAL1-203ENST00000392128 SLC25A27O95847 323 aa12.69□□□□□ -0.38
SMARCAL1-203ENST00000392128 QARSP47897 775 aaKnown RBP12.69□□□□□ -0.38
SMARCAL1-203ENST00000392128 KCNJ6P48051 423 aa12.69□□□□□ -0.38
SMARCAL1-203ENST00000392128 ZNF746Q6NUN9 644 aaPredicted RBP12.69□□□□□ -0.38
SMARCAL1-203ENST00000392128 EPM2AIP1Q7L775 607 aaPredicted RBP12.69□□□□□ -0.38
SMARCAL1-203ENST00000392128 SFR1Q86XK3 245 aa12.69□□□□□ -0.38
SMARCAL1-203ENST00000392128 SLC10A4Q96EP9 437 aa12.69□□□□□ -0.38
SMARCAL1-203ENST00000392128 TMX1Q9H3N1 280 aa12.69□□□□□ -0.38
SMARCAL1-203ENST00000392128 ZHX3Q9H4I2 956 aa12.69□□□□□ -0.38
SMARCAL1-203ENST00000392128 OLFML3Q9NRN5 406 aa12.69□□□□□ -0.38
SMARCAL1-203ENST00000392128 SAMM50Q9Y512 469 aa12.69□□□□□ -0.38
SMARCAL1-203ENST00000392128 LRRC37A2A6NM11 1700 aa12.68□□□□□ -0.38
SMARCAL1-203ENST00000392128 NFASCO94856 1347 aa12.68□□□□□ -0.38
SMARCAL1-203ENST00000392128 TRAF5O00463 557 aa12.68□□□□□ -0.38
SMARCAL1-203ENST00000392128 ZBTB39O15060 712 aa12.68□□□□□ -0.38
SMARCAL1-203ENST00000392128 KCNA2P16389 499 aa12.68□□□□□ -0.38
SMARCAL1-203ENST00000392128 FKBP1BP68106 108 aa12.68□□□□□ -0.38
SMARCAL1-203ENST00000392128 GNPTABQ3T906 1256 aa12.68□□□□□ -0.38
SMARCAL1-203ENST00000392128 LRRC55Q6ZSA7 311 aa12.68□□□□□ -0.38
SMARCAL1-203ENST00000392128 CREBRFQ8IUR6 639 aa12.68□□□□□ -0.38
SMARCAL1-203ENST00000392128 TUBGCP2Q9BSJ2 902 aa12.68□□□□□ -0.38
SMARCAL1-203ENST00000392128 MOV10L1Q9BXT6 1211 aaKnown RBP12.68□□□□□ -0.38
SMARCAL1-203ENST00000392128 DBR1Q9UK59 544 aaKnown RBP12.68□□□□□ -0.38
SMARCAL1-203ENST00000392128 ODF2LQ9ULJ1 636 aa12.68□□□□□ -0.38
SMARCAL1-203ENST00000392128 DOCK5Q9H7D0 1870 aa12.68□□□□□ -0.38
SMARCAL1-203ENST00000392128 RSPH10B2B2RC85 870 aa12.68□□□□□ -0.38
SMARCAL1-203ENST00000392128 PEX10O60683 326 aa12.68□□□□□ -0.38
SMARCAL1-203ENST00000392128 OFD1O75665 1012 aa12.68□□□□□ -0.38
SMARCAL1-203ENST00000392128 CCNE2O96020 404 aa12.68□□□□□ -0.38
SMARCAL1-203ENST00000392128 TPM2P07951 284 aa12.68□□□□□ -0.38
SMARCAL1-203ENST00000392128 RSPH10BP0C881 870 aa12.68□□□□□ -0.38
SMARCAL1-203ENST00000392128 GUCY2CP25092 1073 aa12.68□□□□□ -0.38
SMARCAL1-203ENST00000392128 ZNF131P52739 623 aa12.68□□□□□ -0.38
SMARCAL1-203ENST00000392128 RBM10P98175 930 aaKnown RBP12.68□□□□□ -0.38
SMARCAL1-203ENST00000392128 BMT2Q1RMZ1 405 aa12.68□□□□□ -0.38
SMARCAL1-203ENST00000392128 PPP4R3CPQ6ZMV5 832 aa12.68□□□□□ -0.38
SMARCAL1-203ENST00000392128 NCAPG2Q86XI2 1143 aa12.68□□□□□ -0.38
SMARCAL1-203ENST00000392128 C4orf19Q8IY42 314 aa12.68□□□□□ -0.38
SMARCAL1-203ENST00000392128 TC2NQ8N9U0 490 aa12.68□□□□□ -0.38
SMARCAL1-203ENST00000392128 ZNF507Q8TCN5 953 aa12.68□□□□□ -0.38
SMARCAL1-203ENST00000392128 PAGR1Q9BTK6 254 aa12.68□□□□□ -0.38
SMARCAL1-203ENST00000392128 KCTD10Q9H3F6 313 aa12.68□□□□□ -0.38
SMARCAL1-203ENST00000392128 KCND1Q9NSA2 647 aa12.68□□□□□ -0.38
SMARCAL1-203ENST00000392128 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.68□□□□□ -0.38
SMARCAL1-203ENST00000392128 ASTN1O14525 1302 aa12.67□□□□□ -0.38
SMARCAL1-203ENST00000392128 A0A1W2PQC6 194 aa12.67□□□□□ -0.38
SMARCAL1-203ENST00000392128 ARHGEF35A5YM69 484 aa12.67□□□□□ -0.38
SMARCAL1-203ENST00000392128 SPATA31C2B4DYI2 1134 aa12.67□□□□□ -0.38
SMARCAL1-203ENST00000392128 EIF3JO75822 258 aaKnown RBP12.67□□□□□ -0.38
SMARCAL1-203ENST00000392128 ALDH5A1P51649 535 aaPredicted RBP12.67□□□□□ -0.38
SMARCAL1-203ENST00000392128 PSMC5P62195 406 aa12.67□□□□□ -0.38
SMARCAL1-203ENST00000392128 FKBP3Q00688 224 aaKnown RBP12.67□□□□□ -0.38
SMARCAL1-203ENST00000392128 UBXN1Q04323 297 aa12.67□□□□□ -0.38
SMARCAL1-203ENST00000392128 TRIM14Q14142 442 aa12.67□□□□□ -0.38
SMARCAL1-203ENST00000392128 STXBP2Q15833 593 aa12.67□□□□□ -0.38
SMARCAL1-203ENST00000392128 SMAP1Q8IYB5 467 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms