RNA–Protein interactions for RNA: ENST00000392000.4

LRRFIP1-204, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRRFIP1, Length 3,365 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-204ENST00000392000 GRID2IPA4D2P6 1211 aa15.9■□□□□ 0.14
LRRFIP1-204ENST00000392000 KCNH2Q12809 1159 aa15.9■□□□□ 0.14
LRRFIP1-204ENST00000392000 MSL3Q8N5Y2 521 aaKnown RBP15.9■□□□□ 0.14
LRRFIP1-204ENST00000392000 WDR66Q8TBY9 1149 aa15.9■□□□□ 0.14
LRRFIP1-204ENST00000392000 DYDC1Q8WWB3 177 aa15.9■□□□□ 0.14
LRRFIP1-204ENST00000392000 GLG1Q92896 1179 aa15.9■□□□□ 0.14
LRRFIP1-204ENST00000392000 RAB34Q9BZG1 259 aa15.9■□□□□ 0.14
LRRFIP1-204ENST00000392000 SLC40A1Q9NP59 571 aa15.9■□□□□ 0.14
LRRFIP1-204ENST00000392000 PNMA2Q9UL42 364 aa15.9■□□□□ 0.14
LRRFIP1-204ENST00000392000 ODF2LQ9ULJ1 636 aa15.9■□□□□ 0.14
LRRFIP1-204ENST00000392000 USP17L10C9JJH3 530 aa15.9■□□□□ 0.14
LRRFIP1-204ENST00000392000 FGGP02679 453 aa15.9■□□□□ 0.14
LRRFIP1-204ENST00000392000 CCDC172P0C7W6 258 aa15.9■□□□□ 0.14
LRRFIP1-204ENST00000392000 GBP2P32456 591 aaPredicted RBP15.9■□□□□ 0.14
LRRFIP1-204ENST00000392000 LRRC14Q15048 493 aa15.9■□□□□ 0.14
LRRFIP1-204ENST00000392000 PURBQ96QR8 312 aaKnown RBP15.9■□□□□ 0.14
LRRFIP1-204ENST00000392000 SH3GLB2Q9NR46 395 aa15.9■□□□□ 0.14
LRRFIP1-204ENST00000392000 CCNL1Q9UK58 526 aaPredicted RBP15.9■□□□□ 0.14
LRRFIP1-204ENST00000392000 SNX24Q9Y343 169 aa15.9■□□□□ 0.14
LRRFIP1-204ENST00000392000 RTCBQ9Y3I0 505 aaKnown RBP15.9■□□□□ 0.14
LRRFIP1-204ENST00000392000 ATP6V0A2Q9Y487 856 aa15.9■□□□□ 0.14
LRRFIP1-204ENST00000392000 POTEFA5A3E0 1075 aa15.9■□□□□ 0.14
LRRFIP1-204ENST00000392000 LRRN2O75325 713 aa15.9■□□□□ 0.14
LRRFIP1-204ENST00000392000 SERPING1P05155 500 aa15.9■□□□□ 0.14
LRRFIP1-204ENST00000392000 POTEIP0CG38 1075 aa15.9■□□□□ 0.14
LRRFIP1-204ENST00000392000 GPSM2P81274 684 aa15.9■□□□□ 0.14
LRRFIP1-204ENST00000392000 USH1GQ495M9 461 aa15.9■□□□□ 0.14
LRRFIP1-204ENST00000392000 POTEGQ6S5H5 508 aa15.9■□□□□ 0.14
LRRFIP1-204ENST00000392000 POTEEQ6S8J3 1075 aa15.9■□□□□ 0.14
LRRFIP1-204ENST00000392000 TBC1D1Q86TI0 1168 aaPredicted RBP15.9■□□□□ 0.14
LRRFIP1-204ENST00000392000 CACNA2D3Q8IZS8 1091 aa15.9■□□□□ 0.14
LRRFIP1-204ENST00000392000 PTPN22Q9Y2R2 807 aa15.9■□□□□ 0.14
LRRFIP1-204ENST00000392000 MSL1Q68DK7 614 aa15.89■□□□□ 0.13
LRRFIP1-204ENST00000392000 CLEC4GQ6UXB4 293 aa15.89■□□□□ 0.13
LRRFIP1-204ENST00000392000 RPGRQ92834 1020 aaKnown RBP15.89■□□□□ 0.13
LRRFIP1-204ENST00000392000 TAF1DQ9H5J8 278 aaPredicted RBP15.89■□□□□ 0.13
LRRFIP1-204ENST00000392000 TMOD4Q9NZQ9 345 aa15.89■□□□□ 0.13
LRRFIP1-204ENST00000392000 CNOT8Q9UFF9 292 aaKnown RBP15.89■□□□□ 0.13
LRRFIP1-204ENST00000392000 NOC2LQ9Y3T9 749 aaKnown RBP15.89■□□□□ 0.13
LRRFIP1-204ENST00000392000 ITGB4P16144 1822 aa15.89■□□□□ 0.13
LRRFIP1-204ENST00000392000 SPATA31A1Q5TZJ5 1347 aa15.89■□□□□ 0.13
LRRFIP1-204ENST00000392000 GMNCA6NCL1 334 aa15.89■□□□□ 0.13
LRRFIP1-204ENST00000392000 SPDYE3A6NKU9 549 aa15.89■□□□□ 0.13
LRRFIP1-204ENST00000392000 CHMP2AO43633 222 aa15.89■□□□□ 0.13
LRRFIP1-204ENST00000392000 DOK7Q18PE1 504 aa15.89■□□□□ 0.13
LRRFIP1-204ENST00000392000 HGSNATQ68CP4 663 aa15.89■□□□□ 0.13
LRRFIP1-204ENST00000392000 AADACL2Q6P093 401 aa15.89■□□□□ 0.13
LRRFIP1-204ENST00000392000 OSGEPQ9NPF4 335 aa15.89■□□□□ 0.13
LRRFIP1-204ENST00000392000 DDX25Q9UHL0 483 aaKnown RBP15.89■□□□□ 0.13
LRRFIP1-204ENST00000392000 METTL13Q8N6R0 699 aa15.89■□□□□ 0.13
LRRFIP1-204ENST00000392000 USP38Q8NB14 1042 aa15.89■□□□□ 0.13
LRRFIP1-204ENST00000392000 LBHD1Q9BQE6 289 aaPredicted RBP15.89■□□□□ 0.13
LRRFIP1-204ENST00000392000 STK38LQ9Y2H1 464 aa15.89■□□□□ 0.13
LRRFIP1-204ENST00000392000 NR2E1Q9Y466 385 aa15.89■□□□□ 0.13
LRRFIP1-204ENST00000392000 CDC37Q16543 378 aaPredicted RBP15.88■□□□□ 0.13
LRRFIP1-204ENST00000392000 ANKS1AQ92625 1134 aa15.88■□□□□ 0.13
LRRFIP1-204ENST00000392000 NGLY1Q96IV0 654 aa15.88■□□□□ 0.13
LRRFIP1-204ENST00000392000 EMILIN3Q9NT22 766 aa15.88■□□□□ 0.13
LRRFIP1-204ENST00000392000 DDX20Q9UHI6 824 aaKnown RBP15.88■□□□□ 0.13
LRRFIP1-204ENST00000392000 DDX60Q8IY21 1712 aaKnown RBP15.88■□□□□ 0.13
LRRFIP1-204ENST00000392000 CETN3O15182 167 aa15.88■□□□□ 0.13
LRRFIP1-204ENST00000392000 VPS41P49754 854 aa15.88■□□□□ 0.13
LRRFIP1-204ENST00000392000 CLNS1AP54105 237 aaKnown RBP15.88■□□□□ 0.13
LRRFIP1-204ENST00000392000 ZKSCAN8Q15776 578 aaPredicted RBP15.88■□□□□ 0.13
LRRFIP1-204ENST00000392000 SLC18A3Q16572 532 aa15.88■□□□□ 0.13
LRRFIP1-204ENST00000392000 ZNF804AQ7Z570 1209 aa15.88■□□□□ 0.13
LRRFIP1-204ENST00000392000 ZSCAN29Q8IWY8 852 aaPredicted RBP15.88■□□□□ 0.13
LRRFIP1-204ENST00000392000 ARFGAP2Q8N6H7 521 aa15.88■□□□□ 0.13
LRRFIP1-204ENST00000392000 PIK3R5Q8WYR1 880 aa15.88■□□□□ 0.13
LRRFIP1-204ENST00000392000 RAD54LQ92698 747 aa15.88■□□□□ 0.13
LRRFIP1-204ENST00000392000 ELAC2Q9BQ52 826 aaKnown RBP15.88■□□□□ 0.13
LRRFIP1-204ENST00000392000 PLCD4Q9BRC7 762 aa15.88■□□□□ 0.13
LRRFIP1-204ENST00000392000 CD209Q9NNX6 404 aa15.88■□□□□ 0.13
LRRFIP1-204ENST00000392000 LDHCP07864 332 aa15.87■□□□□ 0.13
LRRFIP1-204ENST00000392000 TM4SF1P30408 202 aa15.87■□□□□ 0.13
LRRFIP1-204ENST00000392000 LRRC55Q6ZSA7 311 aa15.87■□□□□ 0.13
LRRFIP1-204ENST00000392000 ZNF571Q7Z3V5 609 aaPredicted RBP15.87■□□□□ 0.13
LRRFIP1-204ENST00000392000 GUF1Q8N442 669 aaKnown RBP15.87■□□□□ 0.13
LRRFIP1-204ENST00000392000 AK8Q96MA6 479 aa15.87■□□□□ 0.13
LRRFIP1-204ENST00000392000 FOXO6A8MYZ6 492 aa15.87■□□□□ 0.13
LRRFIP1-204ENST00000392000 KIF4AO95239 1232 aa15.87■□□□□ 0.13
LRRFIP1-204ENST00000392000 KDM7AQ6ZMT4 941 aa15.87■□□□□ 0.13
LRRFIP1-204ENST00000392000 ANKRD42Q8N9B4 389 aa15.87■□□□□ 0.13
LRRFIP1-204ENST00000392000 CNBD1Q8NA66 436 aa15.87■□□□□ 0.13
LRRFIP1-204ENST00000392000 MRRFQ96E11 262 aaKnown RBP15.87■□□□□ 0.13
LRRFIP1-204ENST00000392000 RTFDC1Q9BY42 306 aaPredicted RBP15.87■□□□□ 0.13
LRRFIP1-204ENST00000392000 ADAM33Q9BZ11 813 aa15.87■□□□□ 0.13
LRRFIP1-204ENST00000392000 NYXQ9GZU5 481 aa15.87■□□□□ 0.13
LRRFIP1-204ENST00000392000 DNM1LO00429 736 aa15.87■□□□□ 0.13
LRRFIP1-204ENST00000392000 FAM107AO95990 144 aa15.87■□□□□ 0.13
LRRFIP1-204ENST00000392000 PSMC6P62333 389 aa15.87■□□□□ 0.13
LRRFIP1-204ENST00000392000 NAB2Q15742 525 aa15.87■□□□□ 0.13
LRRFIP1-204ENST00000392000 PHLDB2Q86SQ0 1253 aa15.87■□□□□ 0.13
LRRFIP1-204ENST00000392000 GLYCTKQ8IVS8 523 aa15.87■□□□□ 0.13
LRRFIP1-204ENST00000392000 RAPGEF5Q92565 580 aa15.87■□□□□ 0.13
LRRFIP1-204ENST00000392000 ZKSCAN4Q969J2 545 aaPredicted RBP15.87■□□□□ 0.13
LRRFIP1-204ENST00000392000 ELMO3Q96BJ8 720 aa15.87■□□□□ 0.13
LRRFIP1-204ENST00000392000 SEC16BQ96JE7 1060 aa15.87■□□□□ 0.13
LRRFIP1-204ENST00000392000 HDAC9Q9UKV0 1011 aa15.87■□□□□ 0.13
LRRFIP1-204ENST00000392000 CACNA1SQ13698 1873 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms