RNA–Protein interactions for RNA: ENST00000390917.1

RNU6-604P-201, Transcript of RNA, U6 small nuclear 604, pseudogene, humanhuman

BASIC

Gene RNU6-604P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-604P-201ENST00000390917 H0Y8X5 98 aa0.67□□□□□ -2.3
RNU6-604P-201ENST00000390917 TNFRSF13BO14836 293 aaPredicted RBP0.67□□□□□ -2.3
RNU6-604P-201ENST00000390917 SLC26A4O43511 780 aa0.67□□□□□ -2.3
RNU6-604P-201ENST00000390917 CLEC3AO75596 197 aa0.67□□□□□ -2.3
RNU6-604P-201ENST00000390917 HAP1P54257 671 aaPredicted RBP0.67□□□□□ -2.3
RNU6-604P-201ENST00000390917 FOXI1Q12951 378 aa0.67□□□□□ -2.3
RNU6-604P-201ENST00000390917 C9orf50Q5SZB4 431 aa0.67□□□□□ -2.3
RNU6-604P-201ENST00000390917 SLC9A4Q6AI14 798 aa0.67□□□□□ -2.3
RNU6-604P-201ENST00000390917 BNC2Q6ZN30 1099 aaPredicted RBP0.67□□□□□ -2.3
RNU6-604P-201ENST00000390917 CMTR2Q8IYT2 770 aaKnown RBP0.67□□□□□ -2.3
RNU6-604P-201ENST00000390917 KREMEN2Q8NCW0 462 aa0.67□□□□□ -2.3
RNU6-604P-201ENST00000390917 SHCBP1Q8NEM2 672 aa0.67□□□□□ -2.3
RNU6-604P-201ENST00000390917 MICAL1Q8TDZ2 1067 aa0.67□□□□□ -2.3
RNU6-604P-201ENST00000390917 MYEOVQ96EZ4 313 aa0.67□□□□□ -2.3
RNU6-604P-201ENST00000390917 HMCESQ96FZ2 354 aa0.67□□□□□ -2.3
RNU6-604P-201ENST00000390917 KCND1Q9NSA2 647 aa0.67□□□□□ -2.3
RNU6-604P-201ENST00000390917 ZFP69BQ9UJL9 534 aa0.67□□□□□ -2.3
RNU6-604P-201ENST00000390917 FBXL21Q9UKT6 434 aa0.67□□□□□ -2.3
RNU6-604P-201ENST00000390917 SH3BP1Q9Y3L3 701 aa0.67□□□□□ -2.3
RNU6-604P-201ENST00000390917 XDHP47989 1333 aa0.66□□□□□ -2.3
RNU6-604P-201ENST00000390917 TRBV23OR9-2A0A075B6M9 112 aa0.66□□□□□ -2.3
RNU6-604P-201ENST00000390917 KLRG2A4D1S0 409 aaPredicted RBP0.66□□□□□ -2.3
RNU6-604P-201ENST00000390917 GRXCR1A8MXD5 290 aa0.66□□□□□ -2.3
RNU6-604P-201ENST00000390917 SPRY2O43597 315 aa0.66□□□□□ -2.3
RNU6-604P-201ENST00000390917 NDUFB5O43674 189 aa0.66□□□□□ -2.3
RNU6-604P-201ENST00000390917 NPHS1O60500 1241 aa0.66□□□□□ -2.3
RNU6-604P-201ENST00000390917 PPP1R11O60927 126 aaPredicted RBP0.66□□□□□ -2.3
RNU6-604P-201ENST00000390917 PPP1R15AO75807 674 aaPredicted RBP0.66□□□□□ -2.3
RNU6-604P-201ENST00000390917 IGKV3-20P01619 116 aa0.66□□□□□ -2.3
RNU6-604P-201ENST00000390917 LRG1P02750 347 aa0.66□□□□□ -2.3
RNU6-604P-201ENST00000390917 FUCA1P04066 466 aa0.66□□□□□ -2.3
RNU6-604P-201ENST00000390917 CD3EP07766 207 aa0.66□□□□□ -2.3
RNU6-604P-201ENST00000390917 IFNGR1P15260 489 aa0.66□□□□□ -2.3
RNU6-604P-201ENST00000390917 GYPEP15421 78 aa0.66□□□□□ -2.3
RNU6-604P-201ENST00000390917 RAG1P15918 1043 aa0.66□□□□□ -2.3
RNU6-604P-201ENST00000390917 PDE6AP16499 860 aa0.66□□□□□ -2.3
RNU6-604P-201ENST00000390917 TAF6P49848 677 aa0.66□□□□□ -2.3
RNU6-604P-201ENST00000390917 TOP3AQ13472 1001 aaPredicted RBP0.66□□□□□ -2.3
RNU6-604P-201ENST00000390917 NOLC1Q14978 699 aaKnown RBP eCLIP0.66□□□□□ -2.3
RNU6-604P-201ENST00000390917 TMEM164Q5U3C3 297 aa0.66□□□□□ -2.3
RNU6-604P-201ENST00000390917 MORN5Q5VZ52 161 aa0.66□□□□□ -2.3
RNU6-604P-201ENST00000390917 ZNF626Q68DY1 528 aa0.66□□□□□ -2.3
RNU6-604P-201ENST00000390917 USP30Q70CQ3 517 aa0.66□□□□□ -2.3
RNU6-604P-201ENST00000390917 SH2D6Q7Z4S9 175 aa0.66□□□□□ -2.3
RNU6-604P-201ENST00000390917 RIOX2Q8IUF8 465 aa0.66□□□□□ -2.3
RNU6-604P-201ENST00000390917 ARHGEF19Q8IW93 802 aa0.66□□□□□ -2.3
RNU6-604P-201ENST00000390917 DBF4BQ8NFT6 615 aa0.66□□□□□ -2.3
RNU6-604P-201ENST00000390917 PLEKHO2Q8TD55 490 aa0.66□□□□□ -2.3
RNU6-604P-201ENST00000390917 DENND1AQ8TEH3 1009 aa0.66□□□□□ -2.3
RNU6-604P-201ENST00000390917 DDB2Q92466 427 aa0.66□□□□□ -2.3
RNU6-604P-201ENST00000390917 TAF15Q92804 592 aaKnown RBP eCLIP0.66□□□□□ -2.3
RNU6-604P-201ENST00000390917 FCRL3Q96P31 734 aaPredicted RBP0.66□□□□□ -2.3
RNU6-604P-201ENST00000390917 TRMOQ9BU70 441 aa0.66□□□□□ -2.3
RNU6-604P-201ENST00000390917 WDR11Q9BZH6 1224 aa0.66□□□□□ -2.3
RNU6-604P-201ENST00000390917 WASF3Q9UPY6 502 aa0.66□□□□□ -2.3
RNU6-604P-201ENST00000390917 PCDHAC2Q9Y5I4 1007 aa0.66□□□□□ -2.3
RNU6-604P-201ENST00000390917 TRIM24O15164 1050 aa0.65□□□□□ -2.31
RNU6-604P-201ENST00000390917 GPR182O15218 404 aa0.65□□□□□ -2.31
RNU6-604P-201ENST00000390917 DNAJA2O60884 412 aa0.65□□□□□ -2.31
RNU6-604P-201ENST00000390917 HTR3BO95264 441 aa0.65□□□□□ -2.31
RNU6-604P-201ENST00000390917 ESRRBO95718 433 aa0.65□□□□□ -2.31
RNU6-604P-201ENST00000390917 BPNT1O95861 308 aa0.65□□□□□ -2.31
RNU6-604P-201ENST00000390917 THBDP07204 575 aa0.65□□□□□ -2.31
RNU6-604P-201ENST00000390917 CCNFP41002 786 aa0.65□□□□□ -2.31
RNU6-604P-201ENST00000390917 THBS3P49746 956 aa0.65□□□□□ -2.31
RNU6-604P-201ENST00000390917 RABGGTBP53611 331 aa0.65□□□□□ -2.31
RNU6-604P-201ENST00000390917 CACNA2D1P54289 1103 aa0.65□□□□□ -2.31
RNU6-604P-201ENST00000390917 E2F1Q01094 437 aa0.65□□□□□ -2.31
RNU6-604P-201ENST00000390917 MPP3Q13368 585 aa0.65□□□□□ -2.31
RNU6-604P-201ENST00000390917 AUHQ13825 339 aaKnown RBP0.65□□□□□ -2.31
RNU6-604P-201ENST00000390917 MLECQ14165 292 aa0.65□□□□□ -2.31
RNU6-604P-201ENST00000390917 ERV3-1Q14264 604 aa0.65□□□□□ -2.31
RNU6-604P-201ENST00000390917 TBR1Q16650 682 aa0.65□□□□□ -2.31
RNU6-604P-201ENST00000390917 MROH9Q5TGP6 573 aa0.65□□□□□ -2.31
RNU6-604P-201ENST00000390917 AGMOQ6ZNB7 445 aa0.65□□□□□ -2.31
RNU6-604P-201ENST00000390917 BRAPQ7Z569 592 aa0.65□□□□□ -2.31
RNU6-604P-201ENST00000390917 CXorf67Q86X51 503 aaPredicted RBP0.65□□□□□ -2.31
RNU6-604P-201ENST00000390917 VSIG10Q8N0Z9 540 aa0.65□□□□□ -2.31
RNU6-604P-201ENST00000390917 LILRA3Q8N6C8 439 aaPredicted RBP0.65□□□□□ -2.31
RNU6-604P-201ENST00000390917 HASPINQ8TF76 798 aa0.65□□□□□ -2.31
RNU6-604P-201ENST00000390917 WBP2Q969T9 261 aa0.65□□□□□ -2.31
RNU6-604P-201ENST00000390917 ZNF512BQ96KM6 892 aaPredicted RBP0.65□□□□□ -2.31
RNU6-604P-201ENST00000390917 AGO3Q9H9G7 860 aaKnown RBP0.65□□□□□ -2.31
RNU6-604P-201ENST00000390917 FLRT1Q9NZU1 646 aa0.65□□□□□ -2.31
RNU6-604P-201ENST00000390917 MARCH2Q9P0N8 246 aa0.65□□□□□ -2.31
RNU6-604P-201ENST00000390917 PCDHB4Q9Y5E5 795 aa0.65□□□□□ -2.31
RNU6-604P-201ENST00000390917 PPEF2O14830 753 aa0.64□□□□□ -2.31
RNU6-604P-201ENST00000390917 LPXNO60711 386 aa0.64□□□□□ -2.31
RNU6-604P-201ENST00000390917 CLASP2O75122 1294 aaKnown RBP0.64□□□□□ -2.31
RNU6-604P-201ENST00000390917 TADA3O75528 432 aa0.64□□□□□ -2.31
RNU6-604P-201ENST00000390917 RECQL4O94761 1208 aa0.64□□□□□ -2.31
RNU6-604P-201ENST00000390917 HMGCRP04035 888 aa0.64□□□□□ -2.31
RNU6-604P-201ENST00000390917 PLA2G5P39877 138 aa0.64□□□□□ -2.31
RNU6-604P-201ENST00000390917 LINC00205P59089 165 aa0.64□□□□□ -2.31
RNU6-604P-201ENST00000390917 KRTAP12-2P59991 146 aa0.64□□□□□ -2.31
RNU6-604P-201ENST00000390917 RHDQ02161 417 aa0.64□□□□□ -2.31
RNU6-604P-201ENST00000390917 FKBP4Q02790 459 aaKnown RBP eCLIP0.64□□□□□ -2.31
RNU6-604P-201ENST00000390917 RIN1Q13671 783 aa0.64□□□□□ -2.31
RNU6-604P-201ENST00000390917 SEMA3AQ14563 771 aa0.64□□□□□ -2.31
RNU6-604P-201ENST00000390917 ELAVL1Q15717 326 aaKnown RBP0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms