RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 SLC10A5Q5PT55 438 aa16.06■□□□□ 0.16
LRRK1-201ENST00000388948 ERO1AQ96HE7 468 aa16.06■□□□□ 0.16
LRRK1-201ENST00000388948 USP17L15C9J2P7 530 aa16.06■□□□□ 0.16
LRRK1-201ENST00000388948 USP17L13C9JLJ4 530 aa16.06■□□□□ 0.16
LRRK1-201ENST00000388948 USP17L11C9JVI0 530 aa16.06■□□□□ 0.16
LRRK1-201ENST00000388948 USP17L18D6R9N7 530 aa16.06■□□□□ 0.16
LRRK1-201ENST00000388948 USP17L22D6RA61 530 aa16.06■□□□□ 0.16
LRRK1-201ENST00000388948 USP17L17D6RBQ6 530 aa16.06■□□□□ 0.16
LRRK1-201ENST00000388948 USP17L19D6RCP7 530 aa16.06■□□□□ 0.16
LRRK1-201ENST00000388948 USP17L20D6RJB6 530 aa16.06■□□□□ 0.16
LRRK1-201ENST00000388948 UPP2O95045 317 aa16.06■□□□□ 0.16
LRRK1-201ENST00000388948 USP17L24Q0WX57 530 aa16.06■□□□□ 0.16
LRRK1-201ENST00000388948 ALCAMQ13740 583 aa16.06■□□□□ 0.16
LRRK1-201ENST00000388948 UHMK1Q8TAS1 419 aaKnown RBP16.06■□□□□ 0.16
LRRK1-201ENST00000388948 SPATA17Q96L03 361 aa16.06■□□□□ 0.16
LRRK1-201ENST00000388948 DESI2Q9BSY9 194 aa16.06■□□□□ 0.16
LRRK1-201ENST00000388948 GCOM2Q9BZD3 368 aaPredicted RBP16.06■□□□□ 0.16
LRRK1-201ENST00000388948 SYNDIG1Q9H7V2 258 aa16.06■□□□□ 0.16
LRRK1-201ENST00000388948 ZBTB5O15062 677 aa16.06■□□□□ 0.16
LRRK1-201ENST00000388948 HUNKP57058 714 aa16.06■□□□□ 0.16
LRRK1-201ENST00000388948 MCPH1Q8NEM0 835 aa16.06■□□□□ 0.16
LRRK1-201ENST00000388948 CYP2D6P10635 497 aa16.06■□□□□ 0.16
LRRK1-201ENST00000388948 NFIXQ14938 502 aa16.06■□□□□ 0.16
LRRK1-201ENST00000388948 LLGL1Q15334 1064 aa16.06■□□□□ 0.16
LRRK1-201ENST00000388948 MAP4K1Q92918 833 aa16.06■□□□□ 0.16
LRRK1-201ENST00000388948 GDAP1L1Q96MZ0 367 aa16.06■□□□□ 0.16
LRRK1-201ENST00000388948 ASB14A6NK59 587 aa16.06■□□□□ 0.16
LRRK1-201ENST00000388948 PNMA8AQ86V59 439 aaPredicted RBP16.06■□□□□ 0.16
LRRK1-201ENST00000388948 SP8Q8IXZ3 490 aa16.06■□□□□ 0.16
LRRK1-201ENST00000388948 ANKRD13CQ8N6S4 541 aa16.06■□□□□ 0.16
LRRK1-201ENST00000388948 PRPF38AQ8NAV1 312 aaKnown RBP16.06■□□□□ 0.16
LRRK1-201ENST00000388948 POC1B-GALNT4F8VUJ3 575 aa16.05■□□□□ 0.16
LRRK1-201ENST00000388948 RNF40O75150 1001 aa16.05■□□□□ 0.16
LRRK1-201ENST00000388948 P2RX5Q93086 422 aa16.05■□□□□ 0.16
LRRK1-201ENST00000388948 DHTKD1Q96HY7 919 aaPredicted RBP16.05■□□□□ 0.16
LRRK1-201ENST00000388948 ARHGAP42A6NI28 874 aa16.05■□□□□ 0.16
LRRK1-201ENST00000388948 SNAP23O00161 211 aa16.05■□□□□ 0.16
LRRK1-201ENST00000388948 GFPT2O94808 682 aa16.05■□□□□ 0.16
LRRK1-201ENST00000388948 COPB1P53618 953 aaKnown RBP16.05■□□□□ 0.16
LRRK1-201ENST00000388948 AP3B2Q13367 1082 aa16.05■□□□□ 0.16
LRRK1-201ENST00000388948 SNAPC2Q13487 334 aa16.05■□□□□ 0.16
LRRK1-201ENST00000388948 ZNF394Q53GI3 561 aa16.05■□□□□ 0.16
LRRK1-201ENST00000388948 NGRNQ9NPE2 291 aaKnown RBP16.05■□□□□ 0.16
LRRK1-201ENST00000388948 PRR36Q9H6K5 1346 aa16.05■□□□□ 0.16
LRRK1-201ENST00000388948 EHHADHQ08426 723 aa16.05■□□□□ 0.16
LRRK1-201ENST00000388948 FAM117BQ6P1L5 589 aa16.05■□□□□ 0.16
LRRK1-201ENST00000388948 PGBD3Q8N328 593 aa16.05■□□□□ 0.16
LRRK1-201ENST00000388948 SH2B2O14492 632 aaPredicted RBP16.05■□□□□ 0.16
LRRK1-201ENST00000388948 MCAMP43121 646 aa16.05■□□□□ 0.16
LRRK1-201ENST00000388948 SNX1Q13596 522 aa16.05■□□□□ 0.16
LRRK1-201ENST00000388948 LRRC31Q6UY01 552 aa16.05■□□□□ 0.16
LRRK1-201ENST00000388948 SMYD4Q8IYR2 804 aaPredicted RBP16.05■□□□□ 0.16
LRRK1-201ENST00000388948 CHD1O14646 1710 aa16.05■□□□□ 0.16
LRRK1-201ENST00000388948 C6orf222P0C671 652 aaPredicted RBP16.05■□□□□ 0.16
LRRK1-201ENST00000388948 RCSD1Q6JBY9 416 aa16.05■□□□□ 0.16
LRRK1-201ENST00000388948 NUDCD1Q96RS6 583 aa16.05■□□□□ 0.16
LRRK1-201ENST00000388948 TBC1D22BQ9NU19 505 aa16.05■□□□□ 0.16
LRRK1-201ENST00000388948 PRPF3O43395 683 aaKnown RBP16.04■□□□□ 0.16
LRRK1-201ENST00000388948 MMP1P03956 469 aa16.04■□□□□ 0.16
LRRK1-201ENST00000388948 PLCG1P19174 1290 aa16.04■□□□□ 0.16
LRRK1-201ENST00000388948 BASP1P80723 227 aaKnown RBP16.04■□□□□ 0.16
LRRK1-201ENST00000388948 PPP4R4Q6NUP7 873 aa16.04■□□□□ 0.16
LRRK1-201ENST00000388948 SWSAP1Q6NVH7 229 aa16.04■□□□□ 0.16
LRRK1-201ENST00000388948 TSC1Q92574 1164 aa16.04■□□□□ 0.16
LRRK1-201ENST00000388948 MAGOHBQ96A72 148 aaKnown RBP16.04■□□□□ 0.16
LRRK1-201ENST00000388948 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.04■□□□□ 0.16
LRRK1-201ENST00000388948 PARK7Q99497 189 aaKnown RBP16.04■□□□□ 0.16
LRRK1-201ENST00000388948 DYRK4Q9NR20 520 aa16.04■□□□□ 0.16
LRRK1-201ENST00000388948 UTYO14607 1347 aa16.04■□□□□ 0.16
LRRK1-201ENST00000388948 CELF2O95319 508 aaKnown RBP16.04■□□□□ 0.16
LRRK1-201ENST00000388948 ASPHQ12797 758 aa16.04■□□□□ 0.16
LRRK1-201ENST00000388948 MAP3K20Q9NYL2 800 aaKnown RBP16.04■□□□□ 0.16
LRRK1-201ENST00000388948 PLEKHG2Q9H7P9 1386 aa16.04■□□□□ 0.16
LRRK1-201ENST00000388948 TFRCP02786 760 aaKnown RBP16.04■□□□□ 0.16
LRRK1-201ENST00000388948 U2AF2P26368 475 aaKnown RBP eCLIP16.04■□□□□ 0.16
LRRK1-201ENST00000388948 ERICH1Q86X53 443 aa16.04■□□□□ 0.16
LRRK1-201ENST00000388948 HSPH1Q92598 858 aa16.04■□□□□ 0.16
LRRK1-201ENST00000388948 GSDMAQ96QA5 445 aa16.04■□□□□ 0.16
LRRK1-201ENST00000388948 SPATA31A6Q5VVP1 1343 aa16.04■□□□□ 0.16
LRRK1-201ENST00000388948 FBXW4P57775 412 aa16.04■□□□□ 0.16
LRRK1-201ENST00000388948 TMCO4Q5TGY1 634 aa16.03■□□□□ 0.16
LRRK1-201ENST00000388948 SAMD9LQ8IVG5 1584 aa16.03■□□□□ 0.16
LRRK1-201ENST00000388948 MTMR2Q13614 643 aa16.03■□□□□ 0.16
LRRK1-201ENST00000388948 TLK1Q9UKI8 766 aa16.03■□□□□ 0.16
LRRK1-201ENST00000388948 MROH7-TTC4A0A0A0MT08 1334 aa16.03■□□□□ 0.16
LRRK1-201ENST00000388948 CYP2B6P20813 491 aa16.03■□□□□ 0.16
LRRK1-201ENST00000388948 IL1RL1Q01638 556 aa16.03■□□□□ 0.16
LRRK1-201ENST00000388948 ZNF699Q32M78 642 aa16.03■□□□□ 0.16
LRRK1-201ENST00000388948 ADCK5Q3MIX3 580 aa16.03■□□□□ 0.16
LRRK1-201ENST00000388948 PCK1P35558 622 aa16.03■□□□□ 0.16
LRRK1-201ENST00000388948 KRT76Q01546 638 aa16.03■□□□□ 0.16
LRRK1-201ENST00000388948 SREBF2Q12772 1141 aa16.03■□□□□ 0.16
LRRK1-201ENST00000388948 LSG1Q9H089 658 aaKnown RBP16.03■□□□□ 0.16
LRRK1-201ENST00000388948 TNS3Q68CZ2 1445 aa16.03■□□□□ 0.16
LRRK1-201ENST00000388948 PHLPP2Q6ZVD8 1323 aa16.03■□□□□ 0.16
LRRK1-201ENST00000388948 AK9Q5TCS8 1911 aa16.03■□□□□ 0.16
LRRK1-201ENST00000388948 PRELPP51888 382 aa16.03■□□□□ 0.16
LRRK1-201ENST00000388948 CEP95Q96GE4 821 aa16.03■□□□□ 0.16
LRRK1-201ENST00000388948 CYP19A1P11511 503 aaPredicted RBP16.03■□□□□ 0.16
LRRK1-201ENST00000388948 DGKHQ86XP1 1220 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms