RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 PRPF6O94906 941 aaKnown RBP6.18□□□□□ -1.42
RFC1-202ENST00000381897 WEE1P30291 646 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 ALDH3A1P30838 453 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 ADD1P35611 737 aaKnown RBP6.18□□□□□ -1.42
RFC1-202ENST00000381897 SEC13P55735 322 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 DAB2P98082 770 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 EXOSC10Q01780 885 aaKnown RBP6.18□□□□□ -1.42
RFC1-202ENST00000381897 GUCY2DQ02846 1103 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 ZNF827Q17R98 1081 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 C3orf67Q6ZVT6 689 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 BHMTQ93088 406 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 DEPDC7Q96QD5 511 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 DBNDD2Q9BQY9 259 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 VCX3BQ9H321 246 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 SUGCTQ9HAC7 445 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 VCX3AQ9NNX9 186 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 UBN1Q9NPG3 1134 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 SLAMF7Q9NQ25 335 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 NDOR1Q9UHB4 597 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 WDR17Q8IZU2 1322 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 IGSF1Q8N6C5 1336 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 ACTN4O43707 911 aaKnown RBP6.18□□□□□ -1.42
RFC1-202ENST00000381897 GHRP10912 638 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 NDUFV2P19404 249 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 CNTFP26441 200 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 DNA2P51530 1060 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 MTF1Q14872 753 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 CARTPTQ16568 116 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 SLC9C1Q4G0N8 1177 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 KNDC1Q76NI1 1749 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 METTL16Q86W50 562 aaKnown RBP6.18□□□□□ -1.42
RFC1-202ENST00000381897 SPATA5Q8NB90 893 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 NOA1Q8NC60 698 aaKnown RBP6.18□□□□□ -1.42
RFC1-202ENST00000381897 RAB3IL1Q8TBN0 382 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 FAM192AQ9GZU8 254 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 RRN3Q9NYV6 651 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 LIMA1Q9UHB6 759 aaKnown RBP6.18□□□□□ -1.42
RFC1-202ENST00000381897 CD2APQ9Y5K6 639 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 A2ML1A8K2U0 1454 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 PTPRMP28827 1452 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 CCDC169A6NNP5 214 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 CIB2O75838 187 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 SYF2O95926 243 aaKnown RBP6.18□□□□□ -1.42
RFC1-202ENST00000381897 CALML3P27482 149 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 PEX5P50542 639 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 MRPL12P52815 198 aaKnown RBP6.18□□□□□ -1.42
RFC1-202ENST00000381897 KRT31Q15323 416 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 TCP11X2Q5H9J9 407 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 SLC9C2Q5TAH2 1124 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 PAPD7Q5XG87 772 aaKnown RBP6.18□□□□□ -1.42
RFC1-202ENST00000381897 PMF1Q6P1K2 205 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 ANKRD13DQ6ZTN6 518 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 CSGALNACT2Q8N6G5 542 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.18□□□□□ -1.42
RFC1-202ENST00000381897 CCDC110Q8TBZ0 833 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 SCG3Q8WXD2 468 aaKnown RBP6.18□□□□□ -1.42
RFC1-202ENST00000381897 CAVIN3Q969G5 261 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 SKA1Q96BD8 255 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 MMS19Q96T76 1030 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 RAB34Q9BZG1 259 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 CABP5Q9NP86 173 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 CPA4Q9UI42 421 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 PMF1-BGLAPU3KQ54 211 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 PLEKHG1Q9ULL1 1385 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 UBN2Q6ZU65 1347 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 OPLAHO14841 1288 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 IDH1O75874 414 aaKnown RBP6.17□□□□□ -1.42
RFC1-202ENST00000381897 SUN1O94901 812 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 POU2F2P09086 479 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 UQCRFS1P1P0C7P4 283 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 GNAT2P19087 354 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 PTPREP23469 700 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 SOX11P35716 441 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 FLOT2Q14254 428 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 TAF11Q15544 211 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 TCEA2Q15560 299 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 KYNUQ16719 465 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 ZNF658Q5TYW1 1059 aaPredicted RBP6.17□□□□□ -1.42
RFC1-202ENST00000381897 SHC4Q6S5L8 630 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 SYCE1Q8N0S2 351 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 CASP10Q92851 521 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 TMEM106CQ9BVX2 250 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 MMRN2Q9H8L6 949 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 MAGEF1Q9HAY2 307 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 EPB41L5Q9HCM4 733 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 DISC1Q9NRI5 854 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 ETAA1Q9NY74 926 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 ATP1A1P05023 1023 aaKnown RBP6.17□□□□□ -1.42
RFC1-202ENST00000381897 GSTA1P08263 222 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 MSL3P1P0C860 447 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 TBX4P57082 545 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 PPP2R2AP63151 447 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 ASPHQ12797 758 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 STARD3Q14849 445 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 RPS6KA1Q15418 735 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 GFOD2Q3B7J2 385 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 ZNF394Q53GI3 561 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 ZNF365Q70YC5 407 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 ANKMY2Q8IV38 441 aa6.17□□□□□ -1.42
RFC1-202ENST00000381897 LRRN4Q8WUT4 740 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms