RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 EVX2Q03828 476 aa16.34■□□□□ 0.21
CTNS-202ENST00000381870 FAM133AQ8N9E0 248 aa16.34■□□□□ 0.21
CTNS-202ENST00000381870 KLHL29Q96CT2 875 aa16.34■□□□□ 0.21
CTNS-202ENST00000381870 EDEM3Q9BZQ6 932 aa16.34■□□□□ 0.21
CTNS-202ENST00000381870 AZI2Q9H6S1 392 aa16.34■□□□□ 0.21
CTNS-202ENST00000381870 ADAM22Q9P0K1 906 aa16.34■□□□□ 0.21
CTNS-202ENST00000381870 TRIM33Q9UPN9 1127 aa16.34■□□□□ 0.21
CTNS-202ENST00000381870 C1orf167Q5SNV9 1468 aa16.34■□□□□ 0.21
CTNS-202ENST00000381870 CCDC194A0A1B0GVG4 234 aa16.34■□□□□ 0.21
CTNS-202ENST00000381870 PPFIA2O75334 1257 aa16.34■□□□□ 0.21
CTNS-202ENST00000381870 ATP2A2P16615 1042 aaKnown RBP16.34■□□□□ 0.21
CTNS-202ENST00000381870 FGFR2P21802 821 aa16.34■□□□□ 0.21
CTNS-202ENST00000381870 PPP1R2P41236 205 aa16.34■□□□□ 0.21
CTNS-202ENST00000381870 CTCFP49711 727 aaPredicted RBP16.34■□□□□ 0.21
CTNS-202ENST00000381870 RPS6KA3P51812 740 aa16.34■□□□□ 0.21
CTNS-202ENST00000381870 CTSWP56202 376 aa16.34■□□□□ 0.21
CTNS-202ENST00000381870 MKRN4PQ13434 485 aaPredicted RBP16.34■□□□□ 0.21
CTNS-202ENST00000381870 TAF11Q15544 211 aa16.34■□□□□ 0.21
CTNS-202ENST00000381870 LRRC55Q6ZSA7 311 aa16.34■□□□□ 0.21
CTNS-202ENST00000381870 HOOK3Q86VS8 718 aa16.34■□□□□ 0.21
CTNS-202ENST00000381870 GLIS3Q8NEA6 775 aa16.34■□□□□ 0.21
CTNS-202ENST00000381870 TXLNGYQ9BZA5 131 aa16.34■□□□□ 0.21
CTNS-202ENST00000381870 KANSL2Q9H9L4 492 aa16.34■□□□□ 0.21
CTNS-202ENST00000381870 ANAPC4Q9UJX5 808 aa16.34■□□□□ 0.21
CTNS-202ENST00000381870 EIF3BP55884 814 aaKnown RBP16.33■□□□□ 0.2
CTNS-202ENST00000381870 IFI16Q16666 785 aaKnown RBP16.33■□□□□ 0.2
CTNS-202ENST00000381870 GNPTABQ3T906 1256 aa16.33■□□□□ 0.2
CTNS-202ENST00000381870 TRIM68Q6AZZ1 485 aa16.33■□□□□ 0.2
CTNS-202ENST00000381870 ATP8B4Q8TF62 1192 aa16.33■□□□□ 0.2
CTNS-202ENST00000381870 CUEDC2Q9H467 287 aa16.33■□□□□ 0.2
CTNS-202ENST00000381870 GOPCQ9HD26 462 aa16.33■□□□□ 0.2
CTNS-202ENST00000381870 PNMA3Q9UL41 463 aa16.33■□□□□ 0.2
CTNS-202ENST00000381870 PCDHA4Q9UN74 947 aa16.33■□□□□ 0.2
CTNS-202ENST00000381870 DPPA5A6NC42 116 aa16.33■□□□□ 0.2
CTNS-202ENST00000381870 MAP3K13O43283 966 aa16.33■□□□□ 0.2
CTNS-202ENST00000381870 AHCYL1O43865 530 aa16.33■□□□□ 0.2
CTNS-202ENST00000381870 SNX3O60493 162 aa16.33■□□□□ 0.2
CTNS-202ENST00000381870 CYP7A1P22680 504 aa16.33■□□□□ 0.2
CTNS-202ENST00000381870 CALML3P27482 149 aa16.33■□□□□ 0.2
CTNS-202ENST00000381870 KLHL30Q0D2K2 578 aa16.33■□□□□ 0.2
CTNS-202ENST00000381870 LRRC41Q15345 812 aa16.33■□□□□ 0.2
CTNS-202ENST00000381870 GALNTL6Q49A17 601 aa16.33■□□□□ 0.2
CTNS-202ENST00000381870 UBAP2Q5T6F2 1119 aaKnown RBP16.33■□□□□ 0.2
CTNS-202ENST00000381870 SLC30A9Q6PML9 568 aa16.33■□□□□ 0.2
CTNS-202ENST00000381870 BRINP3Q76B58 766 aa16.33■□□□□ 0.2
CTNS-202ENST00000381870 KRT28Q7Z3Y7 464 aa16.33■□□□□ 0.2
CTNS-202ENST00000381870 LRRC57Q8N9N7 239 aa16.33■□□□□ 0.2
CTNS-202ENST00000381870 SEC14L1Q92503 715 aa16.33■□□□□ 0.2
CTNS-202ENST00000381870 FMO2Q99518 471 aa16.33■□□□□ 0.2
CTNS-202ENST00000381870 TCP11L1Q9NUJ3 509 aa16.33■□□□□ 0.2
CTNS-202ENST00000381870 LRP2BPQ9P2M1 347 aa16.33■□□□□ 0.2
CTNS-202ENST00000381870 PCDHA6Q9UN73 950 aa16.33■□□□□ 0.2
CTNS-202ENST00000381870 UTP11Q9Y3A2 253 aaKnown RBP16.33■□□□□ 0.2
CTNS-202ENST00000381870 PCDHA8Q9Y5H6 950 aa16.33■□□□□ 0.2
CTNS-202ENST00000381870 MSH2P43246 934 aa16.32■□□□□ 0.2
CTNS-202ENST00000381870 TRIM28Q13263 835 aaKnown RBP16.32■□□□□ 0.2
CTNS-202ENST00000381870 COBLL1Q53SF7 1204 aa16.32■□□□□ 0.2
CTNS-202ENST00000381870 TMED8Q6PL24 325 aaPredicted RBP16.32■□□□□ 0.2
CTNS-202ENST00000381870 DYMQ7RTS9 669 aa16.32■□□□□ 0.2
CTNS-202ENST00000381870 DZIP3Q86Y13 1208 aaKnown RBP16.32■□□□□ 0.2
CTNS-202ENST00000381870 SYN2Q92777 582 aaPredicted RBP16.32■□□□□ 0.2
CTNS-202ENST00000381870 NAF1Q96HR8 494 aaKnown RBP16.32■□□□□ 0.2
CTNS-202ENST00000381870 MAGEF1Q9HAY2 307 aa16.32■□□□□ 0.2
CTNS-202ENST00000381870 FAM114A2Q9NRY5 505 aa16.32■□□□□ 0.2
CTNS-202ENST00000381870 CCDC188H7C350 402 aa16.31■□□□□ 0.2
CTNS-202ENST00000381870 NEFHP12036 1026 aa16.31■□□□□ 0.2
CTNS-202ENST00000381870 COPS2P61201 443 aa16.31■□□□□ 0.2
CTNS-202ENST00000381870 RNF25Q96BH1 459 aaPredicted RBP16.31■□□□□ 0.2
CTNS-202ENST00000381870 NR2E1Q9Y466 385 aa16.31■□□□□ 0.2
CTNS-202ENST00000381870 ABCB11O95342 1321 aa16.31■□□□□ 0.2
CTNS-202ENST00000381870 M0R2N6 131 aa16.31■□□□□ 0.2
CTNS-202ENST00000381870 LUC7L3O95232 432 aaKnown RBP16.31■□□□□ 0.2
CTNS-202ENST00000381870 GNAT1P11488 350 aa16.31■□□□□ 0.2
CTNS-202ENST00000381870 BCAMP50895 628 aa16.31■□□□□ 0.2
CTNS-202ENST00000381870 PAPOLAP51003 745 aaKnown RBP16.31■□□□□ 0.2
CTNS-202ENST00000381870 TRAF1Q13077 416 aa16.31■□□□□ 0.2
CTNS-202ENST00000381870 FAM47AQ5JRC9 791 aa16.31■□□□□ 0.2
CTNS-202ENST00000381870 UHMK1Q8TAS1 419 aaKnown RBP16.31■□□□□ 0.2
CTNS-202ENST00000381870 SLITRK6Q9H5Y7 841 aa16.31■□□□□ 0.2
CTNS-202ENST00000381870 ARHGEF3Q9NR81 526 aa16.31■□□□□ 0.2
CTNS-202ENST00000381870 MYH4Q9Y623 1939 aa16.31■□□□□ 0.2
CTNS-202ENST00000381870 DOCK2Q92608 1830 aa16.31■□□□□ 0.2
CTNS-202ENST00000381870 MYMKA6NI61 221 aa16.3■□□□□ 0.2
CTNS-202ENST00000381870 STXBP3O00186 592 aa16.3■□□□□ 0.2
CTNS-202ENST00000381870 MPHOSPH10O00566 681 aaKnown RBP16.3■□□□□ 0.2
CTNS-202ENST00000381870 RGS16O15492 202 aaPredicted RBP16.3■□□□□ 0.2
CTNS-202ENST00000381870 OAS1P00973 400 aaKnown RBP16.3■□□□□ 0.2
CTNS-202ENST00000381870 TUBP50607 506 aa16.3■□□□□ 0.2
CTNS-202ENST00000381870 BNIP1Q12981 228 aa16.3■□□□□ 0.2
CTNS-202ENST00000381870 PGM2Q96G03 612 aa16.3■□□□□ 0.2
CTNS-202ENST00000381870 TSC22D3Q99576 134 aa16.3■□□□□ 0.2
CTNS-202ENST00000381870 ZMYND12Q9H0C1 365 aa16.3■□□□□ 0.2
CTNS-202ENST00000381870 RAB17Q9H0T7 212 aa16.3■□□□□ 0.2
CTNS-202ENST00000381870 NUCKS1Q9H1E3 243 aaKnown RBP16.3■□□□□ 0.2
CTNS-202ENST00000381870 PAPOLBQ9NRJ5 636 aaKnown RBP16.3■□□□□ 0.2
CTNS-202ENST00000381870 IRAK4Q9NWZ3 460 aa16.3■□□□□ 0.2
CTNS-202ENST00000381870 DUOX1Q9NRD9 1551 aa16.3■□□□□ 0.2
CTNS-202ENST00000381870 SPDYE5A6NIY4 337 aa16.3■□□□□ 0.2
CTNS-202ENST00000381870 HGSO14964 777 aaPredicted RBP16.3■□□□□ 0.2
CTNS-202ENST00000381870 FGFR1OPO95684 399 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms