RNA–Protein interactions for RNA: ENST00000380918.7

SREK1-203, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,433 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-203ENST00000380918 GJD2Q9UKL4 321 aa6.9□□□□□ -1.31
SREK1-203ENST00000380918 KIAA0556O60303 1618 aa6.9□□□□□ -1.31
SREK1-203ENST00000380918 IQGAP3Q86VI3 1631 aa6.9□□□□□ -1.31
SREK1-203ENST00000380918 UBAP1LF5GYI3 381 aa6.89□□□□□ -1.31
SREK1-203ENST00000380918 H3BQF6 201 aa6.89□□□□□ -1.31
SREK1-203ENST00000380918 CYP11A1P05108 521 aa6.89□□□□□ -1.31
SREK1-203ENST00000380918 PEX19P40855 299 aa6.89□□□□□ -1.31
SREK1-203ENST00000380918 PTPN11Q06124 597 aaPredicted RBP6.89□□□□□ -1.31
SREK1-203ENST00000380918 TLR1Q15399 786 aa6.89□□□□□ -1.31
SREK1-203ENST00000380918 MPRIPQ6WCQ1 1025 aa6.89□□□□□ -1.31
SREK1-203ENST00000380918 BPHLQ86WA6 291 aaPredicted RBP6.89□□□□□ -1.31
SREK1-203ENST00000380918 PIP4P2Q8N4L2 257 aa6.89□□□□□ -1.31
SREK1-203ENST00000380918 MNS1Q8NEH6 495 aa6.89□□□□□ -1.31
SREK1-203ENST00000380918 RNF217Q8TC41 542 aa6.89□□□□□ -1.31
SREK1-203ENST00000380918 ADAMTS18Q8TE60 1221 aa6.89□□□□□ -1.31
SREK1-203ENST00000380918 GPATCH1Q9BRR8 931 aaKnown RBP6.89□□□□□ -1.31
SREK1-203ENST00000380918 ZBED2Q9BTP6 218 aa6.89□□□□□ -1.31
SREK1-203ENST00000380918 DCAF16Q9NXF7 216 aa6.89□□□□□ -1.31
SREK1-203ENST00000380918 STAP2Q9UGK3 403 aa6.89□□□□□ -1.31
SREK1-203ENST00000380918 SALL4Q9UJQ4 1053 aa6.89□□□□□ -1.31
SREK1-203ENST00000380918 PCDHGB2Q9Y5G2 931 aa6.89□□□□□ -1.31
SREK1-203ENST00000380918 ARHGEF40Q8TER5 1519 aa6.89□□□□□ -1.31
SREK1-203ENST00000380918 A0A087WV62 115 aa6.89□□□□□ -1.31
SREK1-203ENST00000380918 KIF2AO00139 706 aaPredicted RBP6.89□□□□□ -1.31
SREK1-203ENST00000380918 DDX3YO15523 660 aaKnown RBP6.89□□□□□ -1.31
SREK1-203ENST00000380918 STX6O43752 255 aa6.89□□□□□ -1.31
SREK1-203ENST00000380918 DNAJA2O60884 412 aa6.89□□□□□ -1.31
SREK1-203ENST00000380918 TNFSF4P23510 183 aa6.89□□□□□ -1.31
SREK1-203ENST00000380918 LIFRP42702 1097 aa6.89□□□□□ -1.31
SREK1-203ENST00000380918 RCAN1P53805 252 aa6.89□□□□□ -1.31
SREK1-203ENST00000380918 UBASH3AP57075 661 aa6.89□□□□□ -1.31
SREK1-203ENST00000380918 CORO7P57737 925 aa6.89□□□□□ -1.31
SREK1-203ENST00000380918 IL2P60568 153 aa6.89□□□□□ -1.31
SREK1-203ENST00000380918 SV2CQ496J9 727 aa6.89□□□□□ -1.31
SREK1-203ENST00000380918 IER5LQ5T953 404 aa6.89□□□□□ -1.31
SREK1-203ENST00000380918 MFSD4BQ5TF39 518 aa6.89□□□□□ -1.31
SREK1-203ENST00000380918 SV2BQ7L1I2 683 aa6.89□□□□□ -1.31
SREK1-203ENST00000380918 ANKRD13BQ86YJ7 626 aa6.89□□□□□ -1.31
SREK1-203ENST00000380918 CLRN3Q8NCR9 226 aa6.89□□□□□ -1.31
SREK1-203ENST00000380918 DEPTORQ8TB45 409 aa6.89□□□□□ -1.31
SREK1-203ENST00000380918 AHCYL2Q96HN2 611 aaKnown RBP6.89□□□□□ -1.31
SREK1-203ENST00000380918 CFAP53Q96M91 514 aa6.89□□□□□ -1.31
SREK1-203ENST00000380918 ARHGAP28Q9P2N2 729 aa6.89□□□□□ -1.31
SREK1-203ENST00000380918 PCDHGB5Q9Y5G0 923 aa6.89□□□□□ -1.31
SREK1-203ENST00000380918 TRAPPC8Q9Y2L5 1435 aa6.89□□□□□ -1.31
SREK1-203ENST00000380918 ABCC4O15439 1325 aa6.89□□□□□ -1.31
SREK1-203ENST00000380918 NEMFO60524 1076 aa6.88□□□□□ -1.31
SREK1-203ENST00000380918 DTNBO60941 627 aa6.88□□□□□ -1.31
SREK1-203ENST00000380918 CILPO75339 1184 aa6.88□□□□□ -1.31
SREK1-203ENST00000380918 TADA3O75528 432 aa6.88□□□□□ -1.31
SREK1-203ENST00000380918 SYT1P21579 422 aa6.88□□□□□ -1.31
SREK1-203ENST00000380918 PSEN2P49810 448 aa6.88□□□□□ -1.31
SREK1-203ENST00000380918 KLF1Q13351 362 aaPredicted RBP6.88□□□□□ -1.31
SREK1-203ENST00000380918 TMEM240Q5SV17 173 aa6.88□□□□□ -1.31
SREK1-203ENST00000380918 TTLL5Q6EMB2 1281 aa6.88□□□□□ -1.31
SREK1-203ENST00000380918 MFSD6Q6ZSS7 791 aa6.88□□□□□ -1.31
SREK1-203ENST00000380918 ZNF511Q8NB15 262 aa6.88□□□□□ -1.31
SREK1-203ENST00000380918 ZSCAN18Q8TBC5 510 aaPredicted RBP6.88□□□□□ -1.31
SREK1-203ENST00000380918 JAKMIP2Q96AA8 810 aa6.88□□□□□ -1.31
SREK1-203ENST00000380918 PPP1R13BQ96KQ4 1090 aa6.88□□□□□ -1.31
SREK1-203ENST00000380918 TTLL2Q9BWV7 592 aa6.88□□□□□ -1.31
SREK1-203ENST00000380918 EPC1Q9H2F5 836 aa6.88□□□□□ -1.31
SREK1-203ENST00000380918 DHX36Q9H2U1 1008 aaKnown RBP6.88□□□□□ -1.31
SREK1-203ENST00000380918 MS4A5Q9H3V2 200 aa6.88□□□□□ -1.31
SREK1-203ENST00000380918 DCTPP1Q9H773 170 aa6.88□□□□□ -1.31
SREK1-203ENST00000380918 CERS4Q9HA82 394 aa6.88□□□□□ -1.31
SREK1-203ENST00000380918 CORO2BQ9UQ03 480 aa6.88□□□□□ -1.31
SREK1-203ENST00000380918 USP16Q9Y5T5 823 aa6.88□□□□□ -1.31
SREK1-203ENST00000380918 ABCA6Q8N139 1617 aa6.88□□□□□ -1.31
SREK1-203ENST00000380918 IFT140Q96RY7 1462 aa6.88□□□□□ -1.31
SREK1-203ENST00000380918 ATP10DQ9P241 1426 aa6.88□□□□□ -1.31
SREK1-203ENST00000380918 FAM170AA1A519 330 aa6.88□□□□□ -1.31
SREK1-203ENST00000380918 ATP8B1O43520 1251 aa6.88□□□□□ -1.31
SREK1-203ENST00000380918 TSPY4P0CV99 314 aa6.88□□□□□ -1.31
SREK1-203ENST00000380918 TSPY10P0CW01 314 aa6.88□□□□□ -1.31
SREK1-203ENST00000380918 RAG1P15918 1043 aa6.88□□□□□ -1.31
SREK1-203ENST00000380918 KIF5BP33176 963 aa6.88□□□□□ -1.31
SREK1-203ENST00000380918 CAP2P40123 477 aa6.88□□□□□ -1.31
SREK1-203ENST00000380918 TMPOP42166 694 aaKnown RBP6.88□□□□□ -1.31
SREK1-203ENST00000380918 GRIA4P48058 902 aa6.88□□□□□ -1.31
SREK1-203ENST00000380918 HDGFP51858 240 aaKnown RBP6.88□□□□□ -1.31
SREK1-203ENST00000380918 GALNT1Q10472 559 aaPredicted RBP6.88□□□□□ -1.31
SREK1-203ENST00000380918 SURF1Q15526 300 aa6.88□□□□□ -1.31
SREK1-203ENST00000380918 PDCD2Q16342 344 aaPredicted RBP6.88□□□□□ -1.31
SREK1-203ENST00000380918 RRP12Q5JTH9 1297 aaKnown RBP6.88□□□□□ -1.31
SREK1-203ENST00000380918 C16orf87Q6PH81 154 aa6.88□□□□□ -1.31
SREK1-203ENST00000380918 UNC5AQ6ZN44 842 aa6.88□□□□□ -1.31
SREK1-203ENST00000380918 ARHGEF25Q86VW2 580 aa6.88□□□□□ -1.31
SREK1-203ENST00000380918 AHI1Q8N157 1196 aa6.88□□□□□ -1.31
SREK1-203ENST00000380918 OR8H1Q8NGG4 311 aa6.88□□□□□ -1.31
SREK1-203ENST00000380918 KCTD13Q8WZ19 329 aa6.88□□□□□ -1.31
SREK1-203ENST00000380918 FMNL2Q96PY5 1086 aa6.88□□□□□ -1.31
SREK1-203ENST00000380918 MRPL4Q9BYD3 311 aaKnown RBP6.88□□□□□ -1.31
SREK1-203ENST00000380918 MIR1-1HGQ9H1L0 117 aa6.88□□□□□ -1.31
SREK1-203ENST00000380918 EMC7Q9NPA0 242 aa6.88□□□□□ -1.31
SREK1-203ENST00000380918 HELLSQ9NRZ9 838 aa6.88□□□□□ -1.31
SREK1-203ENST00000380918 C1orf112Q9NSG2 853 aa6.88□□□□□ -1.31
SREK1-203ENST00000380918 XPO7Q9UIA9 1087 aaKnown RBP6.88□□□□□ -1.31
SREK1-203ENST00000380918 PA2G4Q9UQ80 394 aaKnown RBP6.88□□□□□ -1.31
SREK1-203ENST00000380918 APOBEC2Q9Y235 224 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms