RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 GJB4Q9NTQ9 266 aa10.51□□□□□ -0.73
HMGN1-202ENST00000380747 GRIN2DO15399 1336 aa10.51□□□□□ -0.73
HMGN1-202ENST00000380747 TRANK1O15050 2925 aa10.51□□□□□ -0.73
HMGN1-202ENST00000380747 MAFGO15525 162 aa10.5□□□□□ -0.73
HMGN1-202ENST00000380747 ARP10275 920 aa10.5□□□□□ -0.73
HMGN1-202ENST00000380747 KCNA2P16389 499 aa10.5□□□□□ -0.73
HMGN1-202ENST00000380747 FAAP100Q0VG06 881 aa10.5□□□□□ -0.73
HMGN1-202ENST00000380747 NBPF20Q3BBV1 942 aa10.5□□□□□ -0.73
HMGN1-202ENST00000380747 CEP55Q53EZ4 464 aa10.5□□□□□ -0.73
HMGN1-202ENST00000380747 UTP14CQ5TAP6 766 aaKnown RBP10.5□□□□□ -0.73
HMGN1-202ENST00000380747 GALNT17Q6IS24 598 aa10.5□□□□□ -0.73
HMGN1-202ENST00000380747 ANKRD33Q7Z3H0 272 aa10.5□□□□□ -0.73
HMGN1-202ENST00000380747 PLA2G4DQ86XP0 818 aa10.5□□□□□ -0.73
HMGN1-202ENST00000380747 FAM126BQ8IXS8 530 aa10.5□□□□□ -0.73
HMGN1-202ENST00000380747 SLC43A3Q8NBI5 491 aa10.5□□□□□ -0.73
HMGN1-202ENST00000380747 DAGLBQ8NCG7 672 aa10.5□□□□□ -0.73
HMGN1-202ENST00000380747 TOX2Q96NM4 488 aa10.5□□□□□ -0.73
HMGN1-202ENST00000380747 UIMC1Q96RL1 719 aa10.5□□□□□ -0.73
HMGN1-202ENST00000380747 GPR20Q99678 358 aa10.5□□□□□ -0.73
HMGN1-202ENST00000380747 SENP7Q9BQF6 1050 aa10.5□□□□□ -0.73
HMGN1-202ENST00000380747 SDF4Q9BRK5 362 aa10.5□□□□□ -0.73
HMGN1-202ENST00000380747 PHF20Q9BVI0 1012 aa10.5□□□□□ -0.73
HMGN1-202ENST00000380747 KCNH7Q9NS40 1196 aa10.5□□□□□ -0.73
HMGN1-202ENST00000380747 TMEM39AQ9NV64 488 aa10.5□□□□□ -0.73
HMGN1-202ENST00000380747 KIAA1217Q5T5P2 1943 aa10.5□□□□□ -0.73
HMGN1-202ENST00000380747 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.49□□□□□ -0.73
HMGN1-202ENST00000380747 CCDC194A0A1B0GVG4 234 aa10.49□□□□□ -0.73
HMGN1-202ENST00000380747 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.49□□□□□ -0.73
HMGN1-202ENST00000380747 FAM86B1E9PN63 330 aa10.49□□□□□ -0.73
HMGN1-202ENST00000380747 DDX39AO00148 427 aaKnown RBP10.49□□□□□ -0.73
HMGN1-202ENST00000380747 MEIS1O00470 390 aa10.49□□□□□ -0.73
HMGN1-202ENST00000380747 PPFIA4O75335 1185 aa10.49□□□□□ -0.73
HMGN1-202ENST00000380747 CYP3A4P08684 503 aa10.49□□□□□ -0.73
HMGN1-202ENST00000380747 FAM86B2P0C5J1 330 aa10.49□□□□□ -0.73
HMGN1-202ENST00000380747 COL9A1P20849 921 aa10.49□□□□□ -0.73
HMGN1-202ENST00000380747 DNAJB2P25686 324 aa10.49□□□□□ -0.73
HMGN1-202ENST00000380747 ITGB8P26012 769 aa10.49□□□□□ -0.73
HMGN1-202ENST00000380747 PSEN2P49810 448 aa10.49□□□□□ -0.73
HMGN1-202ENST00000380747 EPHB4P54760 987 aa10.49□□□□□ -0.73
HMGN1-202ENST00000380747 GRIN2CQ14957 1233 aa10.49□□□□□ -0.73
HMGN1-202ENST00000380747 NONOQ15233 471 aaKnown RBP eCLIP10.49□□□□□ -0.73
HMGN1-202ENST00000380747 NPY5RQ15761 445 aa10.49□□□□□ -0.73
HMGN1-202ENST00000380747 KIAA0753Q2KHM9 967 aa10.49□□□□□ -0.73
HMGN1-202ENST00000380747 NIPA1Q7RTP0 329 aa10.49□□□□□ -0.73
HMGN1-202ENST00000380747 KRT25Q7Z3Z0 450 aa10.49□□□□□ -0.73
HMGN1-202ENST00000380747 FAM184AQ8NB25 1140 aa10.49□□□□□ -0.73
HMGN1-202ENST00000380747 TBCKQ8TEA7 893 aa10.49□□□□□ -0.73
HMGN1-202ENST00000380747 ATXN2LQ8WWM7 1075 aaKnown RBP10.49□□□□□ -0.73
HMGN1-202ENST00000380747 CRYGNQ8WXF5 182 aa10.49□□□□□ -0.73
HMGN1-202ENST00000380747 KAT2BQ92831 832 aa10.49□□□□□ -0.73
HMGN1-202ENST00000380747 LLPHQ9BRT6 129 aaKnown RBP10.49□□□□□ -0.73
HMGN1-202ENST00000380747 KATNAL1Q9BW62 490 aa10.49□□□□□ -0.73
HMGN1-202ENST00000380747 SEZ6LQ9BYH1 1024 aa10.49□□□□□ -0.73
HMGN1-202ENST00000380747 TRPV6Q9H1D0 765 aa10.49□□□□□ -0.73
HMGN1-202ENST00000380747 AGO4Q9HCK5 861 aaKnown RBP10.49□□□□□ -0.73
HMGN1-202ENST00000380747 BRMS1Q9HCU9 246 aa10.49□□□□□ -0.73
HMGN1-202ENST00000380747 TELO2Q9Y4R8 837 aa10.49□□□□□ -0.73
HMGN1-202ENST00000380747 REV3LO60673 3130 aa10.48□□□□□ -0.73
HMGN1-202ENST00000380747 IGLV3-22A0A075B6J6 115 aa10.48□□□□□ -0.73
HMGN1-202ENST00000380747 F2P00734 622 aa10.48□□□□□ -0.73
HMGN1-202ENST00000380747 LGALS2P05162 132 aa10.48□□□□□ -0.73
HMGN1-202ENST00000380747 HOXD8P13378 290 aaPredicted RBP10.48□□□□□ -0.73
HMGN1-202ENST00000380747 RAG1P15918 1043 aa10.48□□□□□ -0.73
HMGN1-202ENST00000380747 KRT2P35908 639 aa10.48□□□□□ -0.73
HMGN1-202ENST00000380747 MCM2P49736 904 aa10.48□□□□□ -0.73
HMGN1-202ENST00000380747 PRSS12P56730 875 aa10.48□□□□□ -0.73
HMGN1-202ENST00000380747 GUCY1B3Q02153 619 aa10.48□□□□□ -0.73
HMGN1-202ENST00000380747 FPGSQ05932 587 aa10.48□□□□□ -0.73
HMGN1-202ENST00000380747 PRR16Q569H4 304 aa10.48□□□□□ -0.73
HMGN1-202ENST00000380747 NFRKBQ6P4R8 1299 aa10.48□□□□□ -0.73
HMGN1-202ENST00000380747 C7orf31Q8N865 590 aa10.48□□□□□ -0.73
HMGN1-202ENST00000380747 USP38Q8NB14 1042 aa10.48□□□□□ -0.73
HMGN1-202ENST00000380747 ZNF577Q9BSK1 485 aa10.48□□□□□ -0.73
HMGN1-202ENST00000380747 PPP1R12CQ9BZL4 782 aa10.48□□□□□ -0.73
HMGN1-202ENST00000380747 JPH1Q9HDC5 661 aaPredicted RBP10.48□□□□□ -0.73
HMGN1-202ENST00000380747 TRMT13Q9NUP7 481 aaKnown RBP10.48□□□□□ -0.73
HMGN1-202ENST00000380747 NOD1Q9Y239 953 aa10.48□□□□□ -0.73
HMGN1-202ENST00000380747 PIEZO1Q92508 2521 aa10.48□□□□□ -0.73
HMGN1-202ENST00000380747 M0R2N6 131 aa10.47□□□□□ -0.73
HMGN1-202ENST00000380747 B4GALT4O60513 344 aa10.47□□□□□ -0.73
HMGN1-202ENST00000380747 CD2BP2O95400 341 aaKnown RBP10.47□□□□□ -0.73
HMGN1-202ENST00000380747 CD4P01730 458 aa10.47□□□□□ -0.73
HMGN1-202ENST00000380747 SUPT20HL2P0C7V6 817 aa10.47□□□□□ -0.73
HMGN1-202ENST00000380747 TCF7P36402 384 aaPredicted RBP10.47□□□□□ -0.73
HMGN1-202ENST00000380747 USP11P51784 963 aa10.47□□□□□ -0.73
HMGN1-202ENST00000380747 HMGN5P82970 282 aaKnown RBP10.47□□□□□ -0.73
HMGN1-202ENST00000380747 SETQ01105 290 aaPredicted RBP10.47□□□□□ -0.73
HMGN1-202ENST00000380747 PTPN11Q06124 597 aaPredicted RBP10.47□□□□□ -0.73
HMGN1-202ENST00000380747 ITGB3BPQ13352 177 aaPredicted RBP10.47□□□□□ -0.73
HMGN1-202ENST00000380747 INF2Q27J81 1249 aa10.47□□□□□ -0.73
HMGN1-202ENST00000380747 LETM2Q2VYF4 491 aa10.47□□□□□ -0.73
HMGN1-202ENST00000380747 KRT40Q6A162 431 aa10.47□□□□□ -0.73
HMGN1-202ENST00000380747 PIK3AP1Q6ZUJ8 805 aa10.47□□□□□ -0.73
HMGN1-202ENST00000380747 TRIM50Q86XT4 487 aa10.47□□□□□ -0.73
HMGN1-202ENST00000380747 TTC13Q8NBP0 860 aa10.47□□□□□ -0.73
HMGN1-202ENST00000380747 SEPT1Q8WYJ6 367 aa10.47□□□□□ -0.73
HMGN1-202ENST00000380747 TMX3Q96JJ7 454 aa10.47□□□□□ -0.73
HMGN1-202ENST00000380747 C8orf76Q96K31 380 aa10.47□□□□□ -0.73
HMGN1-202ENST00000380747 PHOX2BQ99453 314 aa10.47□□□□□ -0.73
HMGN1-202ENST00000380747 C16orf70Q9BSU1 422 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms