RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 RASIP1Q5U651 963 aa17.31■□□□□ 0.36
COL2A1-202ENST00000380518 TMEM179Q6ZVK1 233 aa17.31■□□□□ 0.36
COL2A1-202ENST00000380518 METTL23Q86XA0 190 aa17.31■□□□□ 0.36
COL2A1-202ENST00000380518 C7orf31Q8N865 590 aa17.31■□□□□ 0.36
COL2A1-202ENST00000380518 DDX27Q96GQ7 796 aaKnown RBP17.31■□□□□ 0.36
COL2A1-202ENST00000380518 LRRC4Q9HBW1 653 aa17.31■□□□□ 0.36
COL2A1-202ENST00000380518 PRPSAP2O60256 369 aa17.3■□□□□ 0.36
COL2A1-202ENST00000380518 OSBPP22059 807 aa17.3■□□□□ 0.36
COL2A1-202ENST00000380518 KPNA2P52292 529 aaKnown RBP17.3■□□□□ 0.36
COL2A1-202ENST00000380518 RCAN1P53805 252 aa17.3■□□□□ 0.36
COL2A1-202ENST00000380518 MYO1EQ12965 1108 aa17.3■□□□□ 0.36
COL2A1-202ENST00000380518 OR6B2Q6IFH4 312 aa17.3■□□□□ 0.36
COL2A1-202ENST00000380518 TLK1Q9UKI8 766 aa17.3■□□□□ 0.36
COL2A1-202ENST00000380518 CFAP74Q9C0B2 1584 aa17.3■□□□□ 0.36
COL2A1-202ENST00000380518 LGALS16A8MUM7 142 aa17.3■□□□□ 0.36
COL2A1-202ENST00000380518 HMGB1P1B2RPK0 211 aaPredicted RBP17.3■□□□□ 0.36
COL2A1-202ENST00000380518 MGEA5O60502 916 aa17.3■□□□□ 0.36
COL2A1-202ENST00000380518 S100BP04271 92 aaPredicted RBP17.3■□□□□ 0.36
COL2A1-202ENST00000380518 COG7P83436 770 aa17.3■□□□□ 0.36
COL2A1-202ENST00000380518 ZMYND12Q9H0C1 365 aa17.3■□□□□ 0.36
COL2A1-202ENST00000380518 DMTNQ08495 405 aa17.3■□□□□ 0.36
COL2A1-202ENST00000380518 EPHA10Q5JZY3 1008 aa17.3■□□□□ 0.36
COL2A1-202ENST00000380518 FBXO38Q6PIJ6 1188 aa17.3■□□□□ 0.36
COL2A1-202ENST00000380518 ABI1Q8IZP0 508 aa17.3■□□□□ 0.36
COL2A1-202ENST00000380518 PDIK1LQ8N165 341 aa17.3■□□□□ 0.36
COL2A1-202ENST00000380518 PDCD7Q8N8D1 485 aaKnown RBP17.3■□□□□ 0.36
COL2A1-202ENST00000380518 TUBB6Q9BUF5 446 aa17.3■□□□□ 0.36
COL2A1-202ENST00000380518 AP5M1Q9H0R1 490 aa17.3■□□□□ 0.36
COL2A1-202ENST00000380518 K7ERI5 159 aa17.3■□□□□ 0.36
COL2A1-202ENST00000380518 CTTNQ14247 550 aaKnown RBP17.3■□□□□ 0.36
COL2A1-202ENST00000380518 NCAPD2Q15021 1401 aa17.3■□□□□ 0.36
COL2A1-202ENST00000380518 PFKFB3Q16875 520 aaPredicted RBP17.3■□□□□ 0.36
COL2A1-202ENST00000380518 GLE1Q53GS7 698 aaKnown RBP17.3■□□□□ 0.36
COL2A1-202ENST00000380518 SLFN12LQ6IEE8 588 aa17.3■□□□□ 0.36
COL2A1-202ENST00000380518 AP1M1Q9BXS5 423 aa17.3■□□□□ 0.36
COL2A1-202ENST00000380518 GJB4Q9NTQ9 266 aa17.3■□□□□ 0.36
COL2A1-202ENST00000380518 UGGT1Q9NYU2 1555 aa17.3■□□□□ 0.36
COL2A1-202ENST00000380518 PPP1R9AQ9ULJ8 1098 aa17.3■□□□□ 0.36
COL2A1-202ENST00000380518 SCINQ9Y6U3 715 aa17.3■□□□□ 0.36
COL2A1-202ENST00000380518 CD58P19256 250 aa17.29■□□□□ 0.36
COL2A1-202ENST00000380518 HOXA13P31271 388 aaPredicted RBP17.29■□□□□ 0.36
COL2A1-202ENST00000380518 TBC1D10CQ8IV04 446 aa17.29■□□□□ 0.36
COL2A1-202ENST00000380518 PROM2Q8N271 834 aa17.29■□□□□ 0.36
COL2A1-202ENST00000380518 DCLK2Q8N568 766 aa17.29■□□□□ 0.36
COL2A1-202ENST00000380518 SKA2Q8WVK7 121 aaPredicted RBP17.29■□□□□ 0.36
COL2A1-202ENST00000380518 TBK1Q9UHD2 729 aa17.29■□□□□ 0.36
COL2A1-202ENST00000380518 EIF2AK2P19525 551 aaKnown RBP17.29■□□□□ 0.36
COL2A1-202ENST00000380518 C6orf118Q5T5N4 469 aa17.29■□□□□ 0.36
COL2A1-202ENST00000380518 TXLNGQ9NUQ3 528 aa17.29■□□□□ 0.36
COL2A1-202ENST00000380518 EPS15L1Q9UBC2 864 aa17.29■□□□□ 0.36
COL2A1-202ENST00000380518 SLC7A5Q01650 507 aa17.29■□□□□ 0.36
COL2A1-202ENST00000380518 GPR162Q16538 588 aa17.29■□□□□ 0.36
COL2A1-202ENST00000380518 BBS9Q3SYG4 887 aa17.29■□□□□ 0.36
COL2A1-202ENST00000380518 HSP90AA5PQ58FG0 334 aa17.29■□□□□ 0.36
COL2A1-202ENST00000380518 NBPF3Q9H094 633 aa17.29■□□□□ 0.36
COL2A1-202ENST00000380518 TYW5A2RUC4 315 aaKnown RBP17.29■□□□□ 0.36
COL2A1-202ENST00000380518 PNMA6AP0CW24 399 aaPredicted RBP17.29■□□□□ 0.36
COL2A1-202ENST00000380518 ADCY2Q08462 1091 aa17.29■□□□□ 0.36
COL2A1-202ENST00000380518 PCGF5Q86SE9 256 aa17.29■□□□□ 0.36
COL2A1-202ENST00000380518 QTRT2Q9H974 415 aaKnown RBP17.29■□□□□ 0.36
COL2A1-202ENST00000380518 DIS3Q9Y2L1 958 aaKnown RBP17.29■□□□□ 0.36
COL2A1-202ENST00000380518 MYO5CQ9NQX4 1742 aa17.29■□□□□ 0.36
COL2A1-202ENST00000380518 ARHGAP31Q2M1Z3 1444 aa17.29■□□□□ 0.36
COL2A1-202ENST00000380518 RAD17O75943 681 aa17.28■□□□□ 0.36
COL2A1-202ENST00000380518 ACTR5Q9H9F9 607 aaPredicted RBP17.28■□□□□ 0.36
COL2A1-202ENST00000380518 MIF4GDA9UHW6 222 aaKnown RBP17.28■□□□□ 0.36
COL2A1-202ENST00000380518 FGGP02679 453 aa17.28■□□□□ 0.36
COL2A1-202ENST00000380518 CYP2E1P05181 493 aaPredicted RBP17.28■□□□□ 0.36
COL2A1-202ENST00000380518 TRIP13Q15645 432 aaPredicted RBP17.28■□□□□ 0.36
COL2A1-202ENST00000380518 ZBTB33Q86T24 672 aa17.28■□□□□ 0.36
COL2A1-202ENST00000380518 PDZD8Q8NEN9 1154 aa17.28■□□□□ 0.36
COL2A1-202ENST00000380518 CEP72Q9P209 647 aa17.28■□□□□ 0.36
COL2A1-202ENST00000380518 SLC12A6Q9UHW9 1150 aa17.28■□□□□ 0.36
COL2A1-202ENST00000380518 ARHGEF37A1IGU5 675 aa17.28■□□□□ 0.36
COL2A1-202ENST00000380518 PODXLO00592 558 aa17.28■□□□□ 0.36
COL2A1-202ENST00000380518 KCNQ4P56696 695 aa17.28■□□□□ 0.36
COL2A1-202ENST00000380518 CENPUQ71F23 418 aa17.28■□□□□ 0.36
COL2A1-202ENST00000380518 DCAF4Q8WV16 495 aa17.28■□□□□ 0.36
COL2A1-202ENST00000380518 BPIFA3Q9BQP9 254 aa17.28■□□□□ 0.36
COL2A1-202ENST00000380518 MID2Q9UJV3 735 aa17.28■□□□□ 0.36
COL2A1-202ENST00000380518 NFU1Q9UMS0 254 aa17.28■□□□□ 0.36
COL2A1-202ENST00000380518 ANGPTL3Q9Y5C1 460 aa17.28■□□□□ 0.36
COL2A1-202ENST00000380518 RFX7Q2KHR2 1363 aa17.28■□□□□ 0.36
COL2A1-202ENST00000380518 PVALEFA0A1B0GWK0 134 aa17.28■□□□□ 0.36
COL2A1-202ENST00000380518 ANO9A1A5B4 782 aa17.28■□□□□ 0.36
COL2A1-202ENST00000380518 IPO5O00410 1097 aaKnown RBP17.28■□□□□ 0.36
COL2A1-202ENST00000380518 PDE1CQ14123 709 aaPredicted RBP17.28■□□□□ 0.36
COL2A1-202ENST00000380518 ARID5BQ14865 1188 aa17.28■□□□□ 0.36
COL2A1-202ENST00000380518 NPR1P16066 1061 aa17.27■□□□□ 0.36
COL2A1-202ENST00000380518 CA4P22748 312 aa17.27■□□□□ 0.36
COL2A1-202ENST00000380518 FMR1NBQ8N0W7 255 aaPredicted RBP17.27■□□□□ 0.36
COL2A1-202ENST00000380518 ATP6V1E2Q96A05 226 aa17.27■□□□□ 0.36
COL2A1-202ENST00000380518 MSTO1Q9BUK6 570 aa17.27■□□□□ 0.36
COL2A1-202ENST00000380518 ABHD10Q9NUJ1 306 aa17.27■□□□□ 0.36
COL2A1-202ENST00000380518 SRP68Q9UHB9 627 aaKnown RBP17.27■□□□□ 0.36
COL2A1-202ENST00000380518 GOLGA8IPA6NC78 632 aa17.27■□□□□ 0.36
COL2A1-202ENST00000380518 GOLGA8JA6NMD2 632 aa17.27■□□□□ 0.36
COL2A1-202ENST00000380518 ZBTB5O15062 677 aa17.27■□□□□ 0.36
COL2A1-202ENST00000380518 LDHAP00338 332 aaKnown RBP17.27■□□□□ 0.36
COL2A1-202ENST00000380518 NCAPGQ9BPX3 1015 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms