RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 SH3GLB2Q9NR46 395 aa13.65□□□□□ -0.23
PRPF40B-202ENST00000380281 SPATS2LQ9NUQ6 558 aaKnown RBP13.65□□□□□ -0.23
PRPF40B-202ENST00000380281 CHORDC1Q9UHD1 332 aaPredicted RBP13.65□□□□□ -0.23
PRPF40B-202ENST00000380281 ZBTB12Q9Y330 459 aaPredicted RBP13.65□□□□□ -0.23
PRPF40B-202ENST00000380281 COASYQ13057 564 aa13.64□□□□□ -0.23
PRPF40B-202ENST00000380281 CENPPQ6IPU0 288 aa13.64□□□□□ -0.23
PRPF40B-202ENST00000380281 TLDC1Q6P9B6 456 aa13.64□□□□□ -0.23
PRPF40B-202ENST00000380281 KSR1Q8IVT5 923 aa13.64□□□□□ -0.23
PRPF40B-202ENST00000380281 RDH13Q8NBN7 331 aa13.64□□□□□ -0.23
PRPF40B-202ENST00000380281 UHMK1Q8TAS1 419 aaKnown RBP13.64□□□□□ -0.23
PRPF40B-202ENST00000380281 ERGIC2Q96RQ1 377 aa13.64□□□□□ -0.23
PRPF40B-202ENST00000380281 PCDHB13Q9Y5F0 798 aa13.64□□□□□ -0.23
PRPF40B-202ENST00000380281 ITGB4P16144 1822 aa13.64□□□□□ -0.23
PRPF40B-202ENST00000380281 TLR2O60603 784 aa13.64□□□□□ -0.23
PRPF40B-202ENST00000380281 RBM5P52756 815 aaKnown RBP eCLIP13.64□□□□□ -0.23
PRPF40B-202ENST00000380281 UBXN2AP68543 259 aa13.64□□□□□ -0.23
PRPF40B-202ENST00000380281 ADAM9Q13443 819 aa13.64□□□□□ -0.23
PRPF40B-202ENST00000380281 PTGISQ16647 500 aa13.64□□□□□ -0.23
PRPF40B-202ENST00000380281 SLC9C1Q4G0N8 1177 aa13.64□□□□□ -0.23
PRPF40B-202ENST00000380281 ODF2Q5BJF6 829 aa13.64□□□□□ -0.23
PRPF40B-202ENST00000380281 KLHDC7AQ5VTJ3 777 aa13.64□□□□□ -0.23
PRPF40B-202ENST00000380281 CLEC4GQ6UXB4 293 aa13.64□□□□□ -0.23
PRPF40B-202ENST00000380281 UNC13DQ70J99 1090 aa13.64□□□□□ -0.23
PRPF40B-202ENST00000380281 ZNF804AQ7Z570 1209 aa13.64□□□□□ -0.23
PRPF40B-202ENST00000380281 CNBD1Q8NA66 436 aa13.64□□□□□ -0.23
PRPF40B-202ENST00000380281 BMP2KQ9NSY1 1161 aaPredicted RBP13.64□□□□□ -0.23
PRPF40B-202ENST00000380281 SPATA31A1Q5TZJ5 1347 aa13.64□□□□□ -0.23
PRPF40B-202ENST00000380281 EIF4E1BA6NMX2 242 aaKnown RBP13.63□□□□□ -0.23
PRPF40B-202ENST00000380281 G3V3G9 751 aa13.63□□□□□ -0.23
PRPF40B-202ENST00000380281 CHMP2AO43633 222 aa13.63□□□□□ -0.23
PRPF40B-202ENST00000380281 PPP1R37O75864 691 aa13.63□□□□□ -0.23
PRPF40B-202ENST00000380281 ABCB4P21439 1286 aa13.63□□□□□ -0.23
PRPF40B-202ENST00000380281 DCAF8Q5TAQ9 597 aa13.63□□□□□ -0.23
PRPF40B-202ENST00000380281 MAEAQ7L5Y9 396 aa13.63□□□□□ -0.23
PRPF40B-202ENST00000380281 CD209Q9NNX6 404 aa13.63□□□□□ -0.23
PRPF40B-202ENST00000380281 BAIAP2L1Q9UHR4 511 aa13.63□□□□□ -0.23
PRPF40B-202ENST00000380281 ATXN2Q99700 1313 aaKnown RBP13.63□□□□□ -0.23
PRPF40B-202ENST00000380281 LDHCP07864 332 aa13.63□□□□□ -0.23
PRPF40B-202ENST00000380281 CCDC84Q86UT8 332 aaPredicted RBP13.63□□□□□ -0.23
PRPF40B-202ENST00000380281 SPATS2Q86XZ4 545 aaKnown RBP13.63□□□□□ -0.23
PRPF40B-202ENST00000380281 RAD54LQ92698 747 aa13.63□□□□□ -0.23
PRPF40B-202ENST00000380281 OSBPL7Q9BZF2 842 aa13.63□□□□□ -0.23
PRPF40B-202ENST00000380281 DDX47Q9H0S4 455 aaKnown RBP13.63□□□□□ -0.23
PRPF40B-202ENST00000380281 DPH5Q9H2P9 285 aa13.63□□□□□ -0.23
PRPF40B-202ENST00000380281 CASP5P51878 434 aa13.63□□□□□ -0.23
PRPF40B-202ENST00000380281 PSMC6P62333 389 aa13.63□□□□□ -0.23
PRPF40B-202ENST00000380281 MYO1EQ12965 1108 aa13.63□□□□□ -0.23
PRPF40B-202ENST00000380281 PRR16Q569H4 304 aa13.63□□□□□ -0.23
PRPF40B-202ENST00000380281 PDXDC1Q6P996 788 aa13.63□□□□□ -0.23
PRPF40B-202ENST00000380281 FAM196AQ6ZSG2 479 aa13.63□□□□□ -0.23
PRPF40B-202ENST00000380281 YTHDF3Q7Z739 585 aaKnown RBP13.63□□□□□ -0.23
PRPF40B-202ENST00000380281 ADGRF4Q8IZF3 695 aa13.63□□□□□ -0.23
PRPF40B-202ENST00000380281 RETREG2Q8NC44 543 aa13.63□□□□□ -0.23
PRPF40B-202ENST00000380281 LMBR1Q8WVP7 490 aa13.63□□□□□ -0.23
PRPF40B-202ENST00000380281 TATDN2Q93075 761 aa13.63□□□□□ -0.23
PRPF40B-202ENST00000380281 AK8Q96MA6 479 aa13.63□□□□□ -0.23
PRPF40B-202ENST00000380281 TSGA10Q9BZW7 698 aa13.63□□□□□ -0.23
PRPF40B-202ENST00000380281 IRAK4Q9NWZ3 460 aa13.63□□□□□ -0.23
PRPF40B-202ENST00000380281 PCDHAC2Q9Y5I4 1007 aa13.63□□□□□ -0.23
PRPF40B-202ENST00000380281 COL4A3BPQ9Y5P4 624 aa13.63□□□□□ -0.23
PRPF40B-202ENST00000380281 KCNA1Q09470 495 aa13.62□□□□□ -0.23
PRPF40B-202ENST00000380281 CFAP221Q4G0U5 840 aa13.62□□□□□ -0.23
PRPF40B-202ENST00000380281 BAP1Q92560 729 aa13.62□□□□□ -0.23
PRPF40B-202ENST00000380281 TAF4BQ92750 862 aa13.62□□□□□ -0.23
PRPF40B-202ENST00000380281 STAMBPL1Q96FJ0 436 aa13.62□□□□□ -0.23
PRPF40B-202ENST00000380281 RTFDC1Q9BY42 306 aaPredicted RBP13.62□□□□□ -0.23
PRPF40B-202ENST00000380281 NYXQ9GZU5 481 aa13.62□□□□□ -0.23
PRPF40B-202ENST00000380281 CACNA1SQ13698 1873 aa13.62□□□□□ -0.23
PRPF40B-202ENST00000380281 CAND2O75155 1236 aa13.62□□□□□ -0.23
PRPF40B-202ENST00000380281 UPP2O95045 317 aa13.62□□□□□ -0.23
PRPF40B-202ENST00000380281 TCP1P17987 556 aaKnown RBP13.62□□□□□ -0.23
PRPF40B-202ENST00000380281 NR1D1P20393 614 aa13.62□□□□□ -0.23
PRPF40B-202ENST00000380281 NR2F2P24468 414 aa13.62□□□□□ -0.23
PRPF40B-202ENST00000380281 TM4SF1P30408 202 aa13.62□□□□□ -0.23
PRPF40B-202ENST00000380281 RAB34Q9BZG1 259 aa13.62□□□□□ -0.23
PRPF40B-202ENST00000380281 PSTPIP2Q9H939 334 aa13.62□□□□□ -0.23
PRPF40B-202ENST00000380281 ATP6V0A4Q9HBG4 840 aa13.62□□□□□ -0.23
PRPF40B-202ENST00000380281 ANO9A1A5B4 782 aa13.61□□□□□ -0.23
PRPF40B-202ENST00000380281 RSPH10B2B2RC85 870 aa13.61□□□□□ -0.23
PRPF40B-202ENST00000380281 RSPH10BP0C881 870 aa13.61□□□□□ -0.23
PRPF40B-202ENST00000380281 HOXA13P31271 388 aaPredicted RBP13.61□□□□□ -0.23
PRPF40B-202ENST00000380281 LRRC55Q6ZSA7 311 aa13.61□□□□□ -0.23
PRPF40B-202ENST00000380281 SPICE1Q8N0Z3 855 aa13.61□□□□□ -0.23
PRPF40B-202ENST00000380281 SPDYE1Q8NFV5 336 aaPredicted RBP13.61□□□□□ -0.23
PRPF40B-202ENST00000380281 MICAL1Q8TDZ2 1067 aa13.61□□□□□ -0.23
PRPF40B-202ENST00000380281 NSMCE1Q8WV22 266 aa13.61□□□□□ -0.23
PRPF40B-202ENST00000380281 ETAA1Q9NY74 926 aa13.61□□□□□ -0.23
PRPF40B-202ENST00000380281 PKD2L1Q9P0L9 805 aa13.61□□□□□ -0.23
PRPF40B-202ENST00000380281 CPSF2Q9P2I0 782 aaKnown RBP13.61□□□□□ -0.23
PRPF40B-202ENST00000380281 NARFQ9UHQ1 456 aa13.61□□□□□ -0.23
PRPF40B-202ENST00000380281 PCNTO95613 3336 aa13.61□□□□□ -0.23
PRPF40B-202ENST00000380281 DDX60Q8IY21 1712 aaKnown RBP13.61□□□□□ -0.23
PRPF40B-202ENST00000380281 PPP1R11O60927 126 aaPredicted RBP13.61□□□□□ -0.23
PRPF40B-202ENST00000380281 GSTO1P78417 241 aa13.61□□□□□ -0.23
PRPF40B-202ENST00000380281 FKBP3Q00688 224 aaKnown RBP13.61□□□□□ -0.23
PRPF40B-202ENST00000380281 ADCY2Q08462 1091 aa13.61□□□□□ -0.23
PRPF40B-202ENST00000380281 FNBP4Q8N3X1 1017 aaPredicted RBP13.61□□□□□ -0.23
PRPF40B-202ENST00000380281 NEDD1Q8NHV4 660 aa13.61□□□□□ -0.23
PRPF40B-202ENST00000380281 UBLCP1Q8WVY7 318 aaPredicted RBP13.61□□□□□ -0.23
PRPF40B-202ENST00000380281 CYFIP2Q96F07 1278 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms