RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 HDAC9Q9UKV0 1011 aa19.98■□□□□ 0.79
TDP2-202ENST00000378198 GOLGA6CA6NDK9 693 aa19.98■□□□□ 0.79
TDP2-202ENST00000378198 CALUO43852 315 aaPredicted RBP19.98■□□□□ 0.79
TDP2-202ENST00000378198 GOLGA6DP0CG33 693 aa19.98■□□□□ 0.79
TDP2-202ENST00000378198 KNOP1Q1ED39 458 aaKnown RBP19.98■□□□□ 0.79
TDP2-202ENST00000378198 KIAA0753Q2KHM9 967 aa19.98■□□□□ 0.79
TDP2-202ENST00000378198 PRR16Q569H4 304 aa19.98■□□□□ 0.79
TDP2-202ENST00000378198 IFT20Q8IY31 132 aa19.98■□□□□ 0.79
TDP2-202ENST00000378198 SH3GL2Q99962 352 aa19.98■□□□□ 0.79
TDP2-202ENST00000378198 MRIQ9BWK5 157 aa19.98■□□□□ 0.79
TDP2-202ENST00000378198 GOLGA6AQ9NYA3 693 aa19.98■□□□□ 0.79
TDP2-202ENST00000378198 PI4KBQ9UBF8 816 aa19.98■□□□□ 0.79
TDP2-202ENST00000378198 ARMCX3Q9UH62 379 aaPredicted RBP19.98■□□□□ 0.79
TDP2-202ENST00000378198 ADAMTS1Q9UHI8 967 aa19.98■□□□□ 0.79
TDP2-202ENST00000378198 BZW2Q9Y6E2 419 aaKnown RBP19.98■□□□□ 0.79
TDP2-202ENST00000378198 PDXKO00764 312 aa19.97■□□□□ 0.79
TDP2-202ENST00000378198 NPR1P16066 1061 aa19.97■□□□□ 0.79
TDP2-202ENST00000378198 ALDH1B1P30837 517 aa19.97■□□□□ 0.79
TDP2-202ENST00000378198 APBA1Q02410 837 aa19.97■□□□□ 0.79
TDP2-202ENST00000378198 EPM2AIP1Q7L775 607 aaPredicted RBP19.97■□□□□ 0.79
TDP2-202ENST00000378198 MS4A14Q96JA4 679 aa19.97■□□□□ 0.79
TDP2-202ENST00000378198 FAM20AQ96MK3 541 aa19.97■□□□□ 0.79
TDP2-202ENST00000378198 CLSTN1O94985 981 aa19.96■□□□□ 0.79
TDP2-202ENST00000378198 AFPP02771 609 aaKnown RBP19.96■□□□□ 0.79
TDP2-202ENST00000378198 SLURP2P0DP57 97 aa19.96■□□□□ 0.79
TDP2-202ENST00000378198 ARID5AQ03989 594 aa19.96■□□□□ 0.79
TDP2-202ENST00000378198 PPFIA1Q13136 1202 aa19.96■□□□□ 0.79
TDP2-202ENST00000378198 SEPT12Q8IYM1 358 aa19.96■□□□□ 0.79
TDP2-202ENST00000378198 GDF3Q9NR23 364 aa19.96■□□□□ 0.79
TDP2-202ENST00000378198 RRP15Q9Y3B9 282 aaKnown RBP19.96■□□□□ 0.79
TDP2-202ENST00000378198 UBAP1LF5GYI3 381 aa19.96■□□□□ 0.79
TDP2-202ENST00000378198 MYO1CO00159 1063 aa19.96■□□□□ 0.79
TDP2-202ENST00000378198 SHOX2O60902 331 aaPredicted RBP19.96■□□□□ 0.79
TDP2-202ENST00000378198 HSF2BPO75031 334 aa19.96■□□□□ 0.79
TDP2-202ENST00000378198 PPFIA4O75335 1185 aa19.96■□□□□ 0.79
TDP2-202ENST00000378198 SPATA31C1P0DKV0 1188 aa19.96■□□□□ 0.79
TDP2-202ENST00000378198 MMP14P50281 582 aa19.96■□□□□ 0.79
TDP2-202ENST00000378198 CASP5P51878 434 aa19.96■□□□□ 0.79
TDP2-202ENST00000378198 FBXO11Q86XK2 927 aa19.96■□□□□ 0.79
TDP2-202ENST00000378198 SFR1Q86XK3 245 aa19.96■□□□□ 0.79
TDP2-202ENST00000378198 REEP2Q9BRK0 252 aa19.96■□□□□ 0.79
TDP2-202ENST00000378198 TRIM34Q9BYJ4 488 aa19.96■□□□□ 0.79
TDP2-202ENST00000378198 SPDYE3A6NKU9 549 aa19.95■□□□□ 0.78
TDP2-202ENST00000378198 CES2O00748 559 aa19.95■□□□□ 0.78
TDP2-202ENST00000378198 FTCDO95954 541 aa19.95■□□□□ 0.78
TDP2-202ENST00000378198 EPB41P11171 864 aaKnown RBP19.95■□□□□ 0.78
TDP2-202ENST00000378198 SREBF1P36956 1147 aa19.95■□□□□ 0.78
TDP2-202ENST00000378198 PSMC6P62333 389 aa19.95■□□□□ 0.78
TDP2-202ENST00000378198 MRPS25P82663 173 aaKnown RBP19.95■□□□□ 0.78
TDP2-202ENST00000378198 PABPC4Q13310 644 aaKnown RBP eCLIP19.95■□□□□ 0.788e-7■□□□□ 8.3
TDP2-202ENST00000378198 DPY19L2P1Q6NXN4 242 aa19.95■□□□□ 0.78
TDP2-202ENST00000378198 TATDN1Q6P1N9 297 aa19.95■□□□□ 0.78
TDP2-202ENST00000378198 IDI2Q9BXS1 227 aa19.95■□□□□ 0.78
TDP2-202ENST00000378198 TMX4Q9H1E5 349 aaPredicted RBP19.95■□□□□ 0.78
TDP2-202ENST00000378198 METTL14Q9HCE5 456 aaKnown RBP19.95■□□□□ 0.78
TDP2-202ENST00000378198 CIITAP33076 1130 aa19.95■□□□□ 0.78
TDP2-202ENST00000378198 ICA1Q05084 483 aa19.95■□□□□ 0.78
TDP2-202ENST00000378198 IFI16Q16666 785 aaKnown RBP19.95■□□□□ 0.78
TDP2-202ENST00000378198 BMT2Q1RMZ1 405 aa19.95■□□□□ 0.78
TDP2-202ENST00000378198 GBP6Q6ZN66 633 aa19.95■□□□□ 0.78
TDP2-202ENST00000378198 TMEM179Q6ZVK1 233 aa19.95■□□□□ 0.78
TDP2-202ENST00000378198 PODNQ7Z5L7 613 aa19.95■□□□□ 0.78
TDP2-202ENST00000378198 IRF2BP2Q7Z5L9 587 aa19.95■□□□□ 0.78
TDP2-202ENST00000378198 KCTD17Q8N5Z5 321 aa19.95■□□□□ 0.78
TDP2-202ENST00000378198 GMCL1P1Q8NEA9 526 aa19.95■□□□□ 0.78
TDP2-202ENST00000378198 LENG9Q96B70 501 aa19.95■□□□□ 0.78
TDP2-202ENST00000378198 SPAG5Q96R06 1193 aa19.95■□□□□ 0.78
TDP2-202ENST00000378198 RUFY1Q96T51 708 aa19.95■□□□□ 0.78
TDP2-202ENST00000378198 P2RX7Q99572 595 aaKnown RBP19.95■□□□□ 0.78
TDP2-202ENST00000378198 TYW1Q9NV66 732 aaKnown RBP19.95■□□□□ 0.78
TDP2-202ENST00000378198 FEZ2Q9UHY8 353 aaPredicted RBP19.95■□□□□ 0.78
TDP2-202ENST00000378198 DDTLA6NHG4 134 aaPredicted RBP19.94■□□□□ 0.78
TDP2-202ENST00000378198 FAM196BA6NMK8 535 aa19.94■□□□□ 0.78
TDP2-202ENST00000378198 F5H6K3 240 aa19.94■□□□□ 0.78
TDP2-202ENST00000378198 XRCC5P13010 732 aaKnown RBP19.94■□□□□ 0.78
TDP2-202ENST00000378198 UCHL3P15374 230 aa19.94■□□□□ 0.78
TDP2-202ENST00000378198 SLC9A1P19634 815 aa19.94■□□□□ 0.78
TDP2-202ENST00000378198 RPL13P26373 211 aaKnown RBP19.94■□□□□ 0.78
TDP2-202ENST00000378198 KLRC3Q07444 240 aa19.94■□□□□ 0.78
TDP2-202ENST00000378198 TCP10Q12799 353 aa19.94■□□□□ 0.78
TDP2-202ENST00000378198 SF3B2Q13435 895 aaKnown RBP19.94■□□□□ 0.78
TDP2-202ENST00000378198 SIAH1Q8IUQ4 282 aa19.94■□□□□ 0.78
TDP2-202ENST00000378198 FBXL5Q9UKA1 691 aa19.94■□□□□ 0.78
TDP2-202ENST00000378198 MEIS1O00470 390 aa19.93■□□□□ 0.78
TDP2-202ENST00000378198 NPM3O75607 178 aaKnown RBP19.93■□□□□ 0.78
TDP2-202ENST00000378198 ANXA13P27216 316 aa19.93■□□□□ 0.78
TDP2-202ENST00000378198 HDLBPQ00341 1268 aaKnown RBP19.93■□□□□ 0.78
TDP2-202ENST00000378198 PTK2Q05397 1052 aa19.93■□□□□ 0.78
TDP2-202ENST00000378198 PAK2Q13177 524 aa19.93■□□□□ 0.78
TDP2-202ENST00000378198 ENOX2Q16206 610 aaKnown RBP19.93■□□□□ 0.78
TDP2-202ENST00000378198 EXOC3L4Q17RC7 722 aa19.93■□□□□ 0.78
TDP2-202ENST00000378198 FOXR1Q6PIV2 292 aa19.93■□□□□ 0.78
TDP2-202ENST00000378198 TSEN2Q8NCE0 465 aaKnown RBP19.93■□□□□ 0.78
TDP2-202ENST00000378198 TAF4BQ92750 862 aa19.93■□□□□ 0.78
TDP2-202ENST00000378198 GMCL1Q96IK5 515 aa19.93■□□□□ 0.78
TDP2-202ENST00000378198 INPP4AQ96PE3 977 aaPredicted RBP19.93■□□□□ 0.78
TDP2-202ENST00000378198 POLR3CQ9BUI4 534 aaPredicted RBP19.93■□□□□ 0.78
TDP2-202ENST00000378198 PACSIN1Q9BY11 444 aa19.93■□□□□ 0.78
TDP2-202ENST00000378198 LCMT1Q9UIC8 334 aa19.93■□□□□ 0.78
TDP2-202ENST00000378198 ATP8B3O60423 1300 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms