RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 TMEM60Q9H2L4 133 aa14.91□□□□□ -0.02
CKAP2-202ENST00000378034 RNPEPQ9H4A4 650 aa14.91□□□□□ -0.02
CKAP2-202ENST00000378034 TTC12Q9H892 705 aaPredicted RBP14.91□□□□□ -0.02
CKAP2-202ENST00000378034 PDLIM7Q9NR12 457 aa14.91□□□□□ -0.02
CKAP2-202ENST00000378034 PCDHB6Q9Y5E3 794 aa14.91□□□□□ -0.02
CKAP2-202ENST00000378034 WDR81Q562E7 1941 aa14.91□□□□□ -0.02
CKAP2-202ENST00000378034 NRCAMQ92823 1304 aa14.91□□□□□ -0.02
CKAP2-202ENST00000378034 MYH9P35579 1960 aaKnown RBP14.91□□□□□ -0.02
CKAP2-202ENST00000378034 MKI67P46013 3256 aaKnown RBP14.91□□□□□ -0.02
CKAP2-202ENST00000378034 C17orf102A2RUQ5 167 aa14.91□□□□□ -0.02
CKAP2-202ENST00000378034 KIAA0355O15063 1070 aa14.91□□□□□ -0.02
CKAP2-202ENST00000378034 B4GALT4O60513 344 aa14.91□□□□□ -0.02
CKAP2-202ENST00000378034 TXKP42681 527 aa14.91□□□□□ -0.02
CKAP2-202ENST00000378034 RESTQ13127 1097 aa14.91□□□□□ -0.02
CKAP2-202ENST00000378034 PDXDC2PQ6P474 469 aa14.91□□□□□ -0.02
CKAP2-202ENST00000378034 FERMT3Q86UX7 667 aa14.91□□□□□ -0.02
CKAP2-202ENST00000378034 C4orf32Q8N8J7 132 aa14.91□□□□□ -0.02
CKAP2-202ENST00000378034 TMEM39AQ9NV64 488 aa14.91□□□□□ -0.02
CKAP2-202ENST00000378034 GABBR1Q9UBS5 961 aa14.91□□□□□ -0.02
CKAP2-202ENST00000378034 TNRC18O15417 2968 aaPredicted RBP14.9□□□□□ -0.02
CKAP2-202ENST00000378034 IGSF9BQ9UPX0 1349 aa14.9□□□□□ -0.02
CKAP2-202ENST00000378034 DKC1O60832 514 aaKnown RBP eCLIP14.9□□□□□ -0.02
CKAP2-202ENST00000378034 BMP15O95972 392 aa14.9□□□□□ -0.02
CKAP2-202ENST00000378034 PRPHP41219 470 aa14.9□□□□□ -0.02
CKAP2-202ENST00000378034 SPIRE1Q08AE8 756 aa14.9□□□□□ -0.02
CKAP2-202ENST00000378034 PLCB4Q15147 1175 aa14.9□□□□□ -0.02
CKAP2-202ENST00000378034 EPHA7Q15375 998 aa14.9□□□□□ -0.02
CKAP2-202ENST00000378034 PTGISQ16647 500 aa14.9□□□□□ -0.02
CKAP2-202ENST00000378034 GDF6Q6KF10 455 aaPredicted RBP14.9□□□□□ -0.02
CKAP2-202ENST00000378034 SPRYD3Q8NCJ5 442 aa14.9□□□□□ -0.02
CKAP2-202ENST00000378034 ATP6V0A1Q93050 837 aa14.9□□□□□ -0.02
CKAP2-202ENST00000378034 FAM167AQ96KS9 214 aa14.9□□□□□ -0.02
CKAP2-202ENST00000378034 TRPV6Q9H1D0 765 aa14.9□□□□□ -0.02
CKAP2-202ENST00000378034 TBX21Q9UL17 535 aa14.9□□□□□ -0.02
CKAP2-202ENST00000378034 NOD1Q9Y239 953 aa14.9□□□□□ -0.02
CKAP2-202ENST00000378034 POTEB3A0JP26 581 aa14.89□□□□□ -0.03
CKAP2-202ENST00000378034 RRN3P2A6NIE6 340 aa14.89□□□□□ -0.03
CKAP2-202ENST00000378034 HBP1O60381 514 aa14.89□□□□□ -0.03
CKAP2-202ENST00000378034 PTGDRQ13258 359 aa14.89□□□□□ -0.03
CKAP2-202ENST00000378034 NBR1Q14596 966 aa14.89□□□□□ -0.03
CKAP2-202ENST00000378034 TMEM266Q2M3C6 531 aa14.89□□□□□ -0.03
CKAP2-202ENST00000378034 POTEBQ6S5H4 581 aa14.89□□□□□ -0.03
CKAP2-202ENST00000378034 ATP8B4Q8TF62 1192 aa14.89□□□□□ -0.03
CKAP2-202ENST00000378034 BBXQ8WY36 941 aaPredicted RBP14.89□□□□□ -0.03
CKAP2-202ENST00000378034 TRMT13Q9NUP7 481 aaKnown RBP14.89□□□□□ -0.03
CKAP2-202ENST00000378034 KAT6AQ92794 2004 aa14.89□□□□□ -0.03
CKAP2-202ENST00000378034 COL1A2P08123 1366 aa14.89□□□□□ -0.03
CKAP2-202ENST00000378034 EML1O00423 815 aa14.89□□□□□ -0.03
CKAP2-202ENST00000378034 P4HBP07237 508 aaKnown RBP14.89□□□□□ -0.03
CKAP2-202ENST00000378034 MARK3P27448 753 aa14.89□□□□□ -0.03
CKAP2-202ENST00000378034 PPFIA1Q13136 1202 aa14.89□□□□□ -0.03
CKAP2-202ENST00000378034 NEK9Q8TD19 979 aa14.89□□□□□ -0.03
CKAP2-202ENST00000378034 PRDM5Q9NQX1 630 aaPredicted RBP14.89□□□□□ -0.03
CKAP2-202ENST00000378034 CEP131Q9UPN4 1083 aa14.89□□□□□ -0.03
CKAP2-202ENST00000378034 TRPC6Q9Y210 931 aa14.89□□□□□ -0.03
CKAP2-202ENST00000378034 DNAH12Q6ZR08 3092 aa14.89□□□□□ -0.03
CKAP2-202ENST00000378034 FXR2P51116 673 aaKnown RBP eCLIP14.88□□□□□ -0.03
CKAP2-202ENST00000378034 PSMC5P62195 406 aa14.88□□□□□ -0.03
CKAP2-202ENST00000378034 ADAM17P78536 824 aa14.88□□□□□ -0.03
CKAP2-202ENST00000378034 ATP2C1P98194 919 aaPredicted RBP14.88□□□□□ -0.03
CKAP2-202ENST00000378034 PTK7Q13308 1070 aa14.88□□□□□ -0.03
CKAP2-202ENST00000378034 PDIA5Q14554 519 aa14.88□□□□□ -0.03
CKAP2-202ENST00000378034 NCAPH2Q6IBW4 605 aa14.88□□□□□ -0.03
CKAP2-202ENST00000378034 CKAP2LQ8IYA6 745 aa14.88□□□□□ -0.03
CKAP2-202ENST00000378034 CCDC155Q8N6L0 562 aa14.88□□□□□ -0.03
CKAP2-202ENST00000378034 PPP1R13LQ8WUF5 828 aa14.88□□□□□ -0.03
CKAP2-202ENST00000378034 RAB34Q9BZG1 259 aa14.88□□□□□ -0.03
CKAP2-202ENST00000378034 NRBP2Q9NSY0 501 aa14.88□□□□□ -0.03
CKAP2-202ENST00000378034 SETD4Q9NVD3 440 aa14.88□□□□□ -0.03
CKAP2-202ENST00000378034 STK24Q9Y6E0 443 aa14.88□□□□□ -0.03
CKAP2-202ENST00000378034 PDE4DIPQ5VU43 2346 aa14.88□□□□□ -0.03
CKAP2-202ENST00000378034 TRIM43BA6NCK2 446 aa14.87□□□□□ -0.03
CKAP2-202ENST00000378034 H0YGN5 161 aa14.87□□□□□ -0.03
CKAP2-202ENST00000378034 ZSCAN22P10073 491 aaPredicted RBP14.87□□□□□ -0.03
CKAP2-202ENST00000378034 INSRRP14616 1297 aa14.87□□□□□ -0.03
CKAP2-202ENST00000378034 ATP4AP20648 1035 aa14.87□□□□□ -0.03
CKAP2-202ENST00000378034 QARSP47897 775 aaKnown RBP14.87□□□□□ -0.03
CKAP2-202ENST00000378034 GRIK4Q16099 956 aa14.87□□□□□ -0.03
CKAP2-202ENST00000378034 ZNF484Q5JVG2 852 aa14.87□□□□□ -0.03
CKAP2-202ENST00000378034 ARL6IP4Q66PJ3 421 aaKnown RBP14.87□□□□□ -0.03
CKAP2-202ENST00000378034 SH3RF1Q7Z6J0 888 aa14.87□□□□□ -0.03
CKAP2-202ENST00000378034 LMBR1Q8WVP7 490 aa14.87□□□□□ -0.03
CKAP2-202ENST00000378034 TRIM43Q96BQ3 446 aaPredicted RBP14.87□□□□□ -0.03
CKAP2-202ENST00000378034 ZMYND8Q9ULU4 1186 aaPredicted RBP14.87□□□□□ -0.03
CKAP2-202ENST00000378034 TIMP1P01033 207 aa14.87□□□□□ -0.03
CKAP2-202ENST00000378034 OATP04181 439 aa14.87□□□□□ -0.03
CKAP2-202ENST00000378034 RPLP2P05387 115 aaKnown RBP14.87□□□□□ -0.03
CKAP2-202ENST00000378034 RAG1P15918 1043 aa14.87□□□□□ -0.03
CKAP2-202ENST00000378034 TECP42680 631 aa14.87□□□□□ -0.03
CKAP2-202ENST00000378034 BFSP2Q13515 415 aa14.87□□□□□ -0.03
CKAP2-202ENST00000378034 XKR3Q5GH77 459 aa14.87□□□□□ -0.03
CKAP2-202ENST00000378034 DTHD1Q6ZMT9 781 aa14.87□□□□□ -0.03
CKAP2-202ENST00000378034 SERINC5Q86VE9 423 aa14.87□□□□□ -0.03
CKAP2-202ENST00000378034 ERMNQ8TAM6 284 aa14.87□□□□□ -0.03
CKAP2-202ENST00000378034 CAGE1Q8TC20 777 aa14.87□□□□□ -0.03
CKAP2-202ENST00000378034 CTAGE1Q96RT6 745 aa14.87□□□□□ -0.03
CKAP2-202ENST00000378034 NOC4LQ9BVI4 516 aaKnown RBP14.87□□□□□ -0.03
CKAP2-202ENST00000378034 HIPK3Q9H422 1215 aa14.87□□□□□ -0.03
CKAP2-202ENST00000378034 MBLAC1A4D2B0 266 aaPredicted RBP14.86□□□□□ -0.03
CKAP2-202ENST00000378034 PITPNM1O00562 1244 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms