RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 WASF1Q92558 559 aa13.13□□□□□ -0.31
SMARCE1-203ENST00000377808 TNPO1Q92973 898 aaKnown RBP13.13□□□□□ -0.31
SMARCE1-203ENST00000377808 PCYT2Q99447 389 aa13.13□□□□□ -0.31
SMARCE1-203ENST00000377808 CDX2Q99626 313 aaPredicted RBP13.13□□□□□ -0.31
SMARCE1-203ENST00000377808 C22orf23Q9BZE7 217 aa13.13□□□□□ -0.31
SMARCE1-203ENST00000377808 ZNF576Q9H609 170 aa13.13□□□□□ -0.31
SMARCE1-203ENST00000377808 ORC3Q9UBD5 711 aaPredicted RBP13.13□□□□□ -0.31
SMARCE1-203ENST00000377808 TUBE1Q9UJT0 475 aa13.13□□□□□ -0.31
SMARCE1-203ENST00000377808 STXBP5LQ9Y2K9 1186 aa13.13□□□□□ -0.31
SMARCE1-203ENST00000377808 TMEM265A0A087WTH1 108 aa13.12□□□□□ -0.31
SMARCE1-203ENST00000377808 CCDC194A0A1B0GVG4 234 aa13.12□□□□□ -0.31
SMARCE1-203ENST00000377808 CHMP2AO43633 222 aa13.12□□□□□ -0.31
SMARCE1-203ENST00000377808 LGR5O75473 907 aa13.12□□□□□ -0.31
SMARCE1-203ENST00000377808 BAIAP3O94812 1187 aa13.12□□□□□ -0.31
SMARCE1-203ENST00000377808 CCNE2O96020 404 aa13.12□□□□□ -0.31
SMARCE1-203ENST00000377808 MYOGP15173 224 aa13.12□□□□□ -0.31
SMARCE1-203ENST00000377808 FOSL2P15408 326 aa13.12□□□□□ -0.31
SMARCE1-203ENST00000377808 HOXC8P31273 242 aa13.12□□□□□ -0.31
SMARCE1-203ENST00000377808 PLCB4Q15147 1175 aa13.12□□□□□ -0.31
SMARCE1-203ENST00000377808 NONOQ15233 471 aaKnown RBP eCLIP13.12□□□□□ -0.31
SMARCE1-203ENST00000377808 GALNT17Q6IS24 598 aa13.12□□□□□ -0.31
SMARCE1-203ENST00000377808 PDXDC2PQ6P474 469 aa13.12□□□□□ -0.31
SMARCE1-203ENST00000377808 RUFY4Q6ZNE9 571 aa13.12□□□□□ -0.31
SMARCE1-203ENST00000377808 CKAP2LQ8IYA6 745 aa13.12□□□□□ -0.31
SMARCE1-203ENST00000377808 DAGLBQ8NCG7 672 aa13.12□□□□□ -0.31
SMARCE1-203ENST00000377808 GTF3C6Q969F1 213 aa13.12□□□□□ -0.31
SMARCE1-203ENST00000377808 ZBTB10Q96DT7 871 aa13.12□□□□□ -0.31
SMARCE1-203ENST00000377808 SLC9A7Q96T83 725 aa13.12□□□□□ -0.31
SMARCE1-203ENST00000377808 FAM49AQ9H0Q0 323 aaPredicted RBP13.12□□□□□ -0.31
SMARCE1-203ENST00000377808 SLC28A3Q9HAS3 691 aa13.12□□□□□ -0.31
SMARCE1-203ENST00000377808 ZNF302Q9NR11 478 aa13.12□□□□□ -0.31
SMARCE1-203ENST00000377808 TBC1D22BQ9NU19 505 aa13.12□□□□□ -0.31
SMARCE1-203ENST00000377808 YBX2Q9Y2T7 364 aaKnown RBP13.12□□□□□ -0.31
SMARCE1-203ENST00000377808 CDH23Q9H251 3354 aa13.11□□□□□ -0.31
SMARCE1-203ENST00000377808 POTEB3A0JP26 581 aa13.11□□□□□ -0.31
SMARCE1-203ENST00000377808 KIF28PB7ZC32 967 aa13.11□□□□□ -0.31
SMARCE1-203ENST00000377808 CTDNEP1O95476 244 aa13.11□□□□□ -0.31
SMARCE1-203ENST00000377808 TDP2O95551 362 aa13.11□□□□□ -0.31
SMARCE1-203ENST00000377808 CXCL10P02778 98 aa13.11□□□□□ -0.31
SMARCE1-203ENST00000377808 INSRRP14616 1297 aa13.11□□□□□ -0.31
SMARCE1-203ENST00000377808 CIITAP33076 1130 aa13.11□□□□□ -0.31
SMARCE1-203ENST00000377808 USP11P51784 963 aa13.11□□□□□ -0.31
SMARCE1-203ENST00000377808 WDR5P61964 334 aaKnown RBP13.11□□□□□ -0.31
SMARCE1-203ENST00000377808 KRT76Q01546 638 aa13.11□□□□□ -0.31
SMARCE1-203ENST00000377808 IKBKEQ14164 716 aa13.11□□□□□ -0.31
SMARCE1-203ENST00000377808 MBTPS1Q14703 1052 aa13.11□□□□□ -0.31
SMARCE1-203ENST00000377808 GPNMBQ14956 572 aa13.11□□□□□ -0.31
SMARCE1-203ENST00000377808 GRIN2CQ14957 1233 aa13.11□□□□□ -0.31
SMARCE1-203ENST00000377808 INF2Q27J81 1249 aa13.11□□□□□ -0.31
SMARCE1-203ENST00000377808 PPP2R2DQ66LE6 453 aa13.11□□□□□ -0.31
SMARCE1-203ENST00000377808 SWSAP1Q6NVH7 229 aa13.11□□□□□ -0.31
SMARCE1-203ENST00000377808 TAF2Q6P1X5 1199 aa13.11□□□□□ -0.31
SMARCE1-203ENST00000377808 TRAF7Q6Q0C0 670 aa13.11□□□□□ -0.31
SMARCE1-203ENST00000377808 POTEBQ6S5H4 581 aa13.11□□□□□ -0.31
SMARCE1-203ENST00000377808 PLPPR4Q7Z2D5 763 aa13.11□□□□□ -0.31
SMARCE1-203ENST00000377808 KRT25Q7Z3Z0 450 aa13.11□□□□□ -0.31
SMARCE1-203ENST00000377808 RSPH3Q86UC2 560 aa13.11□□□□□ -0.31
SMARCE1-203ENST00000377808 TRAPPC12Q8WVT3 735 aa13.11□□□□□ -0.31
SMARCE1-203ENST00000377808 ZBED2Q9BTP6 218 aa13.11□□□□□ -0.31
SMARCE1-203ENST00000377808 PHF20Q9BVI0 1012 aa13.11□□□□□ -0.31
SMARCE1-203ENST00000377808 GJB4Q9NTQ9 266 aa13.11□□□□□ -0.31
SMARCE1-203ENST00000377808 KAT6AQ92794 2004 aa13.1□□□□□ -0.31
SMARCE1-203ENST00000377808 RRN3P2A6NIE6 340 aa13.1□□□□□ -0.31
SMARCE1-203ENST00000377808 MSH4O15457 936 aa13.1□□□□□ -0.31
SMARCE1-203ENST00000377808 GAS7O60861 476 aa13.1□□□□□ -0.31
SMARCE1-203ENST00000377808 CAND2O75155 1236 aa13.1□□□□□ -0.31
SMARCE1-203ENST00000377808 PSAPP07602 524 aa13.1□□□□□ -0.31
SMARCE1-203ENST00000377808 DEFB103AP81534 67 aa13.1□□□□□ -0.31
SMARCE1-203ENST00000377808 TRIM29Q14134 588 aa13.1□□□□□ -0.31
SMARCE1-203ENST00000377808 TCTN1Q2MV58 587 aa13.1□□□□□ -0.31
SMARCE1-203ENST00000377808 LETM2Q2VYF4 491 aa13.1□□□□□ -0.31
SMARCE1-203ENST00000377808 LRCH2Q5VUJ6 765 aa13.1□□□□□ -0.31
SMARCE1-203ENST00000377808 ZNF746Q6NUN9 644 aaPredicted RBP13.1□□□□□ -0.31
SMARCE1-203ENST00000377808 FAM117BQ6P1L5 589 aa13.1□□□□□ -0.31
SMARCE1-203ENST00000377808 ABHD15Q6UXT9 468 aa13.1□□□□□ -0.31
SMARCE1-203ENST00000377808 PIK3AP1Q6ZUJ8 805 aa13.1□□□□□ -0.31
SMARCE1-203ENST00000377808 TMCO2Q7Z6W1 182 aaPredicted RBP13.1□□□□□ -0.31
SMARCE1-203ENST00000377808 CCDC60Q8IWA6 550 aaPredicted RBP13.1□□□□□ -0.31
SMARCE1-203ENST00000377808 SMAP1Q8IYB5 467 aaPredicted RBP13.1□□□□□ -0.31
SMARCE1-203ENST00000377808 DBF4BQ8NFT6 615 aa13.1□□□□□ -0.31
SMARCE1-203ENST00000377808 DNAJB3Q8WWF6 145 aa13.1□□□□□ -0.31
SMARCE1-203ENST00000377808 SEPT8Q92599 483 aa13.1□□□□□ -0.31
SMARCE1-203ENST00000377808 GJA10Q969M2 543 aa13.1□□□□□ -0.31
SMARCE1-203ENST00000377808 IL17RAQ96F46 866 aa13.1□□□□□ -0.31
SMARCE1-203ENST00000377808 TEKT3Q9BXF9 490 aa13.1□□□□□ -0.31
SMARCE1-203ENST00000377808 BRMS1Q9HCU9 246 aa13.1□□□□□ -0.31
SMARCE1-203ENST00000377808 PCDHA11Q9Y5I1 949 aa13.1□□□□□ -0.31
SMARCE1-203ENST00000377808 TET1Q8NFU7 2136 aa13.09□□□□□ -0.31
SMARCE1-203ENST00000377808 WDR64B1ANS9 1081 aa13.09□□□□□ -0.31
SMARCE1-203ENST00000377808 M0QZ92 97 aa13.09□□□□□ -0.31
SMARCE1-203ENST00000377808 DHX15O43143 795 aaKnown RBP13.09□□□□□ -0.31
SMARCE1-203ENST00000377808 TLL1O43897 1013 aa13.09□□□□□ -0.31
SMARCE1-203ENST00000377808 JAK2O60674 1132 aa13.09□□□□□ -0.31
SMARCE1-203ENST00000377808 EFCAB14O75071 495 aa13.09□□□□□ -0.31
SMARCE1-203ENST00000377808 ATG7O95352 703 aa13.09□□□□□ -0.31
SMARCE1-203ENST00000377808 CA3P07451 260 aa13.09□□□□□ -0.31
SMARCE1-203ENST00000377808 GHRP10912 638 aa13.09□□□□□ -0.31
SMARCE1-203ENST00000377808 KRT2P35908 639 aa13.09□□□□□ -0.31
SMARCE1-203ENST00000377808 SLC26A2P50443 739 aa13.09□□□□□ -0.31
SMARCE1-203ENST00000377808 ADAM17P78536 824 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms