RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 TRANK1O15050 2925 aa24.02■■□□□ 1.44
VSX1-201ENST00000376707 COL4A4P53420 1690 aaPredicted RBP24.02■■□□□ 1.44
VSX1-201ENST00000376707 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.01■■□□□ 1.43
VSX1-201ENST00000376707 RRN3P2A6NIE6 340 aa24.01■■□□□ 1.43
VSX1-201ENST00000376707 ARP10275 920 aa24.01■■□□□ 1.43
VSX1-201ENST00000376707 GHRP10912 638 aa24.01■■□□□ 1.43
VSX1-201ENST00000376707 HSPA4P34932 840 aa24.01■■□□□ 1.43
VSX1-201ENST00000376707 ZNF76P36508 570 aa24.01■■□□□ 1.43
VSX1-201ENST00000376707 FBXO22Q8NEZ5 403 aa24.01■■□□□ 1.43
VSX1-201ENST00000376707 SP7Q8TDD2 431 aaPredicted RBP24.01■■□□□ 1.43
VSX1-201ENST00000376707 TNPO1Q92973 898 aaKnown RBP24.01■■□□□ 1.43
VSX1-201ENST00000376707 HLA-CQ95604 372 aa24.01■■□□□ 1.43
VSX1-201ENST00000376707 JAKMIP1Q96N16 626 aaKnown RBP24.01■■□□□ 1.43
VSX1-201ENST00000376707 C17orf80Q9BSJ5 609 aa24.01■■□□□ 1.43
VSX1-201ENST00000376707 TRPC6Q9Y210 931 aa24.01■■□□□ 1.43
VSX1-201ENST00000376707 MBLAC1A4D2B0 266 aaPredicted RBP24■■□□□ 1.43
VSX1-201ENST00000376707 BMP1P13497 986 aa24■■□□□ 1.43
VSX1-201ENST00000376707 ADD1P35611 737 aaKnown RBP24■■□□□ 1.43
VSX1-201ENST00000376707 SREBF1P36956 1147 aa24■■□□□ 1.43
VSX1-201ENST00000376707 KCNQ1P51787 676 aa24■■□□□ 1.43
VSX1-201ENST00000376707 ACTR2P61160 394 aa24■■□□□ 1.43
VSX1-201ENST00000376707 APOBRQ0VD83 1088 aa24■■□□□ 1.43
VSX1-201ENST00000376707 MARCH8Q5T0T0 291 aa24■■□□□ 1.43
VSX1-201ENST00000376707 Q6ZUG5 572 aa24■■□□□ 1.43
VSX1-201ENST00000376707 DNAJB3Q8WWF6 145 aa24■■□□□ 1.43
VSX1-201ENST00000376707 PCYT2Q99447 389 aa24■■□□□ 1.43
VSX1-201ENST00000376707 AGO4Q9HCK5 861 aaKnown RBP24■■□□□ 1.43
VSX1-201ENST00000376707 MICAL3Q7RTP6 2002 aa24■■□□□ 1.43
VSX1-201ENST00000376707 INSRRP14616 1297 aa23.99■■□□□ 1.43
VSX1-201ENST00000376707 CLK2P49760 499 aaKnown RBP23.99■■□□□ 1.43
VSX1-201ENST00000376707 MGAT3Q09327 533 aa23.99■■□□□ 1.43
VSX1-201ENST00000376707 PFKFB3Q16875 520 aaPredicted RBP23.99■■□□□ 1.43
VSX1-201ENST00000376707 BLOC1S2Q6QNY1 142 aa23.99■■□□□ 1.43
VSX1-201ENST00000376707 BRF1Q92994 677 aa23.99■■□□□ 1.43
VSX1-201ENST00000376707 SAMD11Q96NU1 681 aa23.99■■□□□ 1.43
VSX1-201ENST00000376707 SNX14Q9Y5W7 946 aa23.99■■□□□ 1.43
VSX1-201ENST00000376707 MEIS1O00470 390 aa23.98■■□□□ 1.43
VSX1-201ENST00000376707 REC8O95072 547 aa23.98■■□□□ 1.43
VSX1-201ENST00000376707 RPLP2P05387 115 aaKnown RBP23.98■■□□□ 1.43
VSX1-201ENST00000376707 NEFLP07196 543 aa23.98■■□□□ 1.43
VSX1-201ENST00000376707 SCG2P13521 617 aa23.98■■□□□ 1.43
VSX1-201ENST00000376707 ITGB3BPQ13352 177 aaPredicted RBP23.98■■□□□ 1.43
VSX1-201ENST00000376707 LPIN1Q14693 890 aa23.98■■□□□ 1.43
VSX1-201ENST00000376707 JAKMIP3Q5VZ66 844 aa23.98■■□□□ 1.43
VSX1-201ENST00000376707 FBXL16Q8N461 479 aa23.98■■□□□ 1.43
VSX1-201ENST00000376707 FAM49AQ9H0Q0 323 aaPredicted RBP23.98■■□□□ 1.43
VSX1-201ENST00000376707 CDY2AQ9Y6F7 541 aa23.98■■□□□ 1.43
VSX1-201ENST00000376707 STAT5BP51692 787 aa23.97■■□□□ 1.43
VSX1-201ENST00000376707 MRPS6P82932 125 aaKnown RBP23.97■■□□□ 1.43
VSX1-201ENST00000376707 NIPA1Q7RTP0 329 aa23.97■■□□□ 1.43
VSX1-201ENST00000376707 PLPPR4Q7Z2D5 763 aa23.97■■□□□ 1.43
VSX1-201ENST00000376707 ZBTB10Q96DT7 871 aa23.97■■□□□ 1.43
VSX1-201ENST00000376707 EPB41L2O43491 1005 aaKnown RBP23.96■■□□□ 1.43
VSX1-201ENST00000376707 PLCB4Q15147 1175 aa23.96■■□□□ 1.43
VSX1-201ENST00000376707 EPC2Q52LR7 807 aa23.96■■□□□ 1.43
VSX1-201ENST00000376707 FBXO47Q5MNV8 452 aa23.96■■□□□ 1.43
VSX1-201ENST00000376707 CCDC12Q8WUD4 166 aaPredicted RBP23.96■■□□□ 1.43
VSX1-201ENST00000376707 NECAB3Q96P71 396 aaPredicted RBP23.96■■□□□ 1.43
VSX1-201ENST00000376707 C6orf50Q9HD87 102 aa23.96■■□□□ 1.43
VSX1-201ENST00000376707 M0QZ92 97 aa23.95■■□□□ 1.42
VSX1-201ENST00000376707 DDX39AO00148 427 aaKnown RBP23.95■■□□□ 1.42
VSX1-201ENST00000376707 RPS6KB1P23443 525 aa23.95■■□□□ 1.42
VSX1-201ENST00000376707 AKAP17AQ02040 695 aaKnown RBP23.95■■□□□ 1.42
VSX1-201ENST00000376707 IER5Q5VY09 327 aa23.95■■□□□ 1.42
VSX1-201ENST00000376707 MCTP2Q6DN12 878 aa23.95■■□□□ 1.42
VSX1-201ENST00000376707 TSHZ1Q6ZSZ6 1077 aa23.95■■□□□ 1.42
VSX1-201ENST00000376707 PLA2G4DQ86XP0 818 aa23.95■■□□□ 1.42
VSX1-201ENST00000376707 IL17RAQ96F46 866 aa23.95■■□□□ 1.42
VSX1-201ENST00000376707 SIP14410 1827 aa23.95■■□□□ 1.42
VSX1-201ENST00000376707 REV3LO60673 3130 aa23.95■■□□□ 1.42
VSX1-201ENST00000376707 KAT6AQ92794 2004 aa23.94■■□□□ 1.42
VSX1-201ENST00000376707 ESYT2A0FGR8 921 aa23.94■■□□□ 1.42
VSX1-201ENST00000376707 POTEB3A0JP26 581 aa23.94■■□□□ 1.42
VSX1-201ENST00000376707 BACH1O14867 736 aa23.94■■□□□ 1.42
VSX1-201ENST00000376707 ATG7O95352 703 aa23.94■■□□□ 1.42
VSX1-201ENST00000376707 PSMA5P28066 241 aa23.94■■□□□ 1.42
VSX1-201ENST00000376707 SLC26A2P50443 739 aa23.94■■□□□ 1.42
VSX1-201ENST00000376707 PTPROQ16827 1216 aa23.94■■□□□ 1.42
VSX1-201ENST00000376707 POTEBQ6S5H4 581 aa23.94■■□□□ 1.42
VSX1-201ENST00000376707 TMEM192Q8IY95 271 aa23.94■■□□□ 1.42
VSX1-201ENST00000376707 REXO1Q8N1G1 1221 aaKnown RBP23.94■■□□□ 1.42
VSX1-201ENST00000376707 TRAPPC12Q8WVT3 735 aa23.94■■□□□ 1.42
VSX1-201ENST00000376707 AGXT2Q9BYV1 514 aa23.94■■□□□ 1.42
VSX1-201ENST00000376707 ZMYND12Q9H0C1 365 aa23.94■■□□□ 1.42
VSX1-201ENST00000376707 XIRP2A4UGR9 3374 aa23.94■■□□□ 1.42
VSX1-201ENST00000376707 NID2Q14112 1375 aa23.93■■□□□ 1.42
VSX1-201ENST00000376707 FAM86B1E9PN63 330 aa23.93■■□□□ 1.42
VSX1-201ENST00000376707 PRPF3O43395 683 aaKnown RBP23.93■■□□□ 1.42
VSX1-201ENST00000376707 CCNE2O96020 404 aa23.93■■□□□ 1.42
VSX1-201ENST00000376707 FAM86B2P0C5J1 330 aa23.93■■□□□ 1.42
VSX1-201ENST00000376707 GPM6BQ13491 265 aa23.93■■□□□ 1.42
VSX1-201ENST00000376707 FAM160B1Q5W0V3 765 aa23.93■■□□□ 1.42
VSX1-201ENST00000376707 FIBCD1Q8N539 461 aa23.93■■□□□ 1.42
VSX1-201ENST00000376707 MRPL38Q96DV4 380 aaKnown RBP23.93■■□□□ 1.42
VSX1-201ENST00000376707 PCDHA2Q9Y5H9 948 aa23.93■■□□□ 1.42
VSX1-201ENST00000376707 TRPV2Q9Y5S1 764 aa23.93■■□□□ 1.42
VSX1-201ENST00000376707 COL4A6Q14031 1691 aa23.92■■□□□ 1.42
VSX1-201ENST00000376707 MUC3AQ02505 3323 aa23.92■■□□□ 1.42
VSX1-201ENST00000376707 H3BNC9 293 aa23.92■■□□□ 1.42
VSX1-201ENST00000376707 ENPP3O14638 875 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms