RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 VPS52Q8N1B4 723 aa14.78□□□□□ -0.04
C9orf47-203ENST00000375851 MXD3Q9BW11 206 aa14.78□□□□□ -0.04
C9orf47-203ENST00000375851 CD163L1Q9NR16 1453 aa14.78□□□□□ -0.04
C9orf47-203ENST00000375851 NTSR2O95665 410 aa14.78□□□□□ -0.04
C9orf47-203ENST00000375851 GTF2A1P52655 376 aaPredicted RBP14.78□□□□□ -0.04
C9orf47-203ENST00000375851 OSTNP61366 133 aa14.78□□□□□ -0.04
C9orf47-203ENST00000375851 APBA1Q02410 837 aa14.78□□□□□ -0.04
C9orf47-203ENST00000375851 SPP2Q13103 211 aa14.78□□□□□ -0.04
C9orf47-203ENST00000375851 BCAS4Q8TDM0 211 aa14.78□□□□□ -0.04
C9orf47-203ENST00000375851 CCT6BQ92526 530 aa14.78□□□□□ -0.04
C9orf47-203ENST00000375851 PDLIM2Q96JY6 352 aa14.78□□□□□ -0.04
C9orf47-203ENST00000375851 SUGT1Q9Y2Z0 365 aa14.78□□□□□ -0.04
C9orf47-203ENST00000375851 CCDC144BQ3MJ40 725 aa14.77□□□□□ -0.04
C9orf47-203ENST00000375851 KCTD16Q68DU8 428 aa14.77□□□□□ -0.04
C9orf47-203ENST00000375851 ZBTB33Q86T24 672 aa14.77□□□□□ -0.04
C9orf47-203ENST00000375851 PROM2Q8N271 834 aa14.77□□□□□ -0.04
C9orf47-203ENST00000375851 RPS6KC1Q96S38 1066 aa14.77□□□□□ -0.04
C9orf47-203ENST00000375851 WRNIP1Q96S55 665 aa14.77□□□□□ -0.04
C9orf47-203ENST00000375851 CAPS2Q9BXY5 557 aa14.77□□□□□ -0.04
C9orf47-203ENST00000375851 PARD6BQ9BYG5 372 aa14.77□□□□□ -0.04
C9orf47-203ENST00000375851 FEM1BQ9UK73 627 aa14.77□□□□□ -0.04
C9orf47-203ENST00000375851 ZNF233A6NK53 670 aa14.77□□□□□ -0.04
C9orf47-203ENST00000375851 SRGAP2CP0DJJ0 459 aa14.77□□□□□ -0.04
C9orf47-203ENST00000375851 MAN1A1P33908 653 aa14.77□□□□□ -0.04
C9orf47-203ENST00000375851 PRELPP51888 382 aa14.77□□□□□ -0.04
C9orf47-203ENST00000375851 FAM149B1Q96BN6 582 aa14.77□□□□□ -0.04
C9orf47-203ENST00000375851 DAGLAQ9Y4D2 1042 aa14.77□□□□□ -0.04
C9orf47-203ENST00000375851 JCADQ9P266 1359 aa14.77□□□□□ -0.04
C9orf47-203ENST00000375851 H7C0C1 242 aa14.77□□□□□ -0.05
C9orf47-203ENST00000375851 ATP8B1O43520 1251 aa14.77□□□□□ -0.05
C9orf47-203ENST00000375851 CRCPO75575 148 aa14.77□□□□□ -0.05
C9orf47-203ENST00000375851 ATP5OP48047 213 aa14.77□□□□□ -0.05
C9orf47-203ENST00000375851 EPHB4P54760 987 aa14.77□□□□□ -0.05
C9orf47-203ENST00000375851 IFRD2Q12894 506 aaPredicted RBP14.77□□□□□ -0.05
C9orf47-203ENST00000375851 CCDC13Q8IYE1 715 aa14.77□□□□□ -0.05
C9orf47-203ENST00000375851 CRAMP1Q96RY5 1269 aa14.77□□□□□ -0.05
C9orf47-203ENST00000375851 OSBPL5Q9H0X9 879 aaPredicted RBP14.77□□□□□ -0.05
C9orf47-203ENST00000375851 FAM114A2Q9NRY5 505 aa14.77□□□□□ -0.05
C9orf47-203ENST00000375851 GIPC1O14908 333 aa14.77□□□□□ -0.05
C9orf47-203ENST00000375851 CIB2O75838 187 aa14.77□□□□□ -0.05
C9orf47-203ENST00000375851 ANTXR2P58335 489 aa14.77□□□□□ -0.05
C9orf47-203ENST00000375851 C2orf54Q08AI8 447 aa14.77□□□□□ -0.05
C9orf47-203ENST00000375851 COASYQ13057 564 aa14.77□□□□□ -0.05
C9orf47-203ENST00000375851 NEDD9Q14511 834 aa14.77□□□□□ -0.05
C9orf47-203ENST00000375851 SBK1Q52WX2 424 aa14.77□□□□□ -0.05
C9orf47-203ENST00000375851 PDZD4Q76G19 769 aaPredicted RBP14.77□□□□□ -0.05
C9orf47-203ENST00000375851 MCUR1Q96AQ8 359 aa14.77□□□□□ -0.05
C9orf47-203ENST00000375851 ABHD10Q9NUJ1 306 aa14.77□□□□□ -0.05
C9orf47-203ENST00000375851 ANAPC4Q9UJX5 808 aa14.77□□□□□ -0.05
C9orf47-203ENST00000375851 KIDINS220Q9ULH0 1771 aa14.77□□□□□ -0.05
C9orf47-203ENST00000375851 DIP2AQ14689 1571 aa14.76□□□□□ -0.05
C9orf47-203ENST00000375851 SYNJ2BP-COX16A0A087WUM0 186 aa14.76□□□□□ -0.05
C9orf47-203ENST00000375851 POTEFA5A3E0 1075 aa14.76□□□□□ -0.05
C9orf47-203ENST00000375851 POTEIP0CG38 1075 aa14.76□□□□□ -0.05
C9orf47-203ENST00000375851 JAK3P52333 1124 aa14.76□□□□□ -0.05
C9orf47-203ENST00000375851 SLC12A2P55011 1212 aa14.76□□□□□ -0.05
C9orf47-203ENST00000375851 KIF22Q14807 665 aa14.76□□□□□ -0.05
C9orf47-203ENST00000375851 SPOUT1Q5T280 376 aaKnown RBP14.76□□□□□ -0.05
C9orf47-203ENST00000375851 CCDC62Q6P9F0 684 aa14.76□□□□□ -0.05
C9orf47-203ENST00000375851 POTEGQ6S5H5 508 aa14.76□□□□□ -0.05
C9orf47-203ENST00000375851 POTEEQ6S8J3 1075 aa14.76□□□□□ -0.05
C9orf47-203ENST00000375851 PADI6Q6TGC4 694 aa14.76□□□□□ -0.05
C9orf47-203ENST00000375851 LINC00116Q8NCU8 138 aa14.76□□□□□ -0.05
C9orf47-203ENST00000375851 RUNDC3BQ96NL0 473 aa14.76□□□□□ -0.05
C9orf47-203ENST00000375851 AP5M1Q9H0R1 490 aa14.76□□□□□ -0.05
C9orf47-203ENST00000375851 MRPL47Q9HD33 250 aaKnown RBP14.76□□□□□ -0.05
C9orf47-203ENST00000375851 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.76□□□□□ -0.05
C9orf47-203ENST00000375851 COX16Q9P0S2 106 aa14.76□□□□□ -0.05
C9orf47-203ENST00000375851 NR3C1P04150 777 aa14.76□□□□□ -0.05
C9orf47-203ENST00000375851 PLTPP55058 493 aa14.76□□□□□ -0.05
C9orf47-203ENST00000375851 ATP11AP98196 1134 aa14.76□□□□□ -0.05
C9orf47-203ENST00000375851 LMNB2Q03252 620 aa14.76□□□□□ -0.05
C9orf47-203ENST00000375851 PRPF38AQ8NAV1 312 aaKnown RBP14.76□□□□□ -0.05
C9orf47-203ENST00000375851 SPZ1Q9BXG8 430 aa14.76□□□□□ -0.05
C9orf47-203ENST00000375851 TBC1D22BQ9NU19 505 aa14.76□□□□□ -0.05
C9orf47-203ENST00000375851 FBXO2Q9UK22 296 aaPredicted RBP14.76□□□□□ -0.05
C9orf47-203ENST00000375851 FAM205CA6NFA0 338 aa14.76□□□□□ -0.05
C9orf47-203ENST00000375851 WDR64B1ANS9 1081 aa14.76□□□□□ -0.05
C9orf47-203ENST00000375851 TEX33O43247 280 aa14.76□□□□□ -0.05
C9orf47-203ENST00000375851 ZBTB7AO95365 584 aa14.76□□□□□ -0.05
C9orf47-203ENST00000375851 ABL1P00519 1130 aa14.76□□□□□ -0.05
C9orf47-203ENST00000375851 CD58P19256 250 aa14.76□□□□□ -0.05
C9orf47-203ENST00000375851 NKX1-1Q15270 411 aaPredicted RBP14.76□□□□□ -0.05
C9orf47-203ENST00000375851 SGO2Q562F6 1265 aa14.76□□□□□ -0.05
C9orf47-203ENST00000375851 GKAP1Q5VSY0 366 aaPredicted RBP14.76□□□□□ -0.05
C9orf47-203ENST00000375851 TTBK2Q6IQ55 1244 aa14.76□□□□□ -0.05
C9orf47-203ENST00000375851 SDCCAG8Q86SQ7 713 aaPredicted RBP14.76□□□□□ -0.05
C9orf47-203ENST00000375851 BANK1Q8NDB2 785 aa14.76□□□□□ -0.05
C9orf47-203ENST00000375851 PBKQ96KB5 322 aa14.76□□□□□ -0.05
C9orf47-203ENST00000375851 EPB41L4AQ9HCS5 686 aaPredicted RBP14.76□□□□□ -0.05
C9orf47-203ENST00000375851 MARK3P27448 753 aa14.76□□□□□ -0.05
C9orf47-203ENST00000375851 Q3C1V9 767 aa14.76□□□□□ -0.05
C9orf47-203ENST00000375851 TOGARAM2Q6ZUX3 1019 aa14.76□□□□□ -0.05
C9orf47-203ENST00000375851 DYDC2Q96IM9 177 aa14.76□□□□□ -0.05
C9orf47-203ENST00000375851 HOXC10Q9NYD6 342 aa14.76□□□□□ -0.05
C9orf47-203ENST00000375851 CD2APQ9Y5K6 639 aa14.76□□□□□ -0.05
C9orf47-203ENST00000375851 NRXN1Q9ULB1 1477 aa14.75□□□□□ -0.05
C9orf47-203ENST00000375851 GABPAQ06546 454 aa14.75□□□□□ -0.05
C9orf47-203ENST00000375851 SNRNP48Q6IEG0 339 aaKnown RBP14.75□□□□□ -0.05
C9orf47-203ENST00000375851 NME8Q8N427 588 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms