RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 DPF2Q92785 391 aa22.85■■□□□ 1.25
TGFBR1-202ENST00000374994 FRMD3A2A2Y4 597 aa22.85■■□□□ 1.25
TGFBR1-202ENST00000374994 CFAP73A6NFT4 308 aa22.85■■□□□ 1.25
TGFBR1-202ENST00000374994 USP17L8P0C7I0 530 aa22.85■■□□□ 1.25
TGFBR1-202ENST00000374994 CA4P22748 312 aa22.85■■□□□ 1.25
TGFBR1-202ENST00000374994 ANO3Q9BYT9 981 aa22.85■■□□□ 1.25
TGFBR1-202ENST00000374994 TPX2Q9ULW0 747 aaKnown RBP22.85■■□□□ 1.25
TGFBR1-202ENST00000374994 RNF17Q9BXT8 1623 aaKnown RBP22.85■■□□□ 1.25
TGFBR1-202ENST00000374994 RFC1P35251 1148 aaPredicted RBP22.85■■□□□ 1.25
TGFBR1-202ENST00000374994 POLGP54098 1239 aaPredicted RBP22.85■■□□□ 1.25
TGFBR1-202ENST00000374994 SPARCL1Q14515 664 aa22.85■■□□□ 1.25
TGFBR1-202ENST00000374994 ANKRD20A4Q4UJ75 823 aa22.85■■□□□ 1.25
TGFBR1-202ENST00000374994 ANKRD20A8PQ5CZ79 823 aa22.85■■□□□ 1.25
TGFBR1-202ENST00000374994 ANKRD20A2Q5SQ80 823 aa22.85■■□□□ 1.25
TGFBR1-202ENST00000374994 ANKRD20A1Q5TYW2 823 aa22.85■■□□□ 1.25
TGFBR1-202ENST00000374994 CCPG1Q9ULG6 757 aa22.85■■□□□ 1.25
TGFBR1-202ENST00000374994 CPDO75976 1380 aa22.85■■□□□ 1.25
TGFBR1-202ENST00000374994 CYP2D7A0A087X1C5 515 aa22.84■■□□□ 1.25
TGFBR1-202ENST00000374994 ENAHQ8N8S7 591 aaPredicted RBP22.84■■□□□ 1.25
TGFBR1-202ENST00000374994 PITPNM3Q9BZ71 974 aa22.84■■□□□ 1.25
TGFBR1-202ENST00000374994 CRB1P82279 1406 aa22.84■■□□□ 1.25
TGFBR1-202ENST00000374994 HVCN1Q96D96 273 aa22.84■■□□□ 1.25
TGFBR1-202ENST00000374994 ZNF277Q9NRM2 450 aaPredicted RBP22.84■■□□□ 1.25
TGFBR1-202ENST00000374994 ZWINTO95229 277 aa22.84■■□□□ 1.25
TGFBR1-202ENST00000374994 CROCC2H7BZ55 1655 aa22.84■■□□□ 1.25
TGFBR1-202ENST00000374994 ANXA13P27216 316 aa22.84■■□□□ 1.25
TGFBR1-202ENST00000374994 NXNQ6DKJ4 435 aa22.84■■□□□ 1.25
TGFBR1-202ENST00000374994 DNAJC24Q6P3W2 148 aa22.84■■□□□ 1.25
TGFBR1-202ENST00000374994 SPATA4Q8NEY3 305 aa22.84■■□□□ 1.25
TGFBR1-202ENST00000374994 GSDMBQ8TAX9 411 aa22.84■■□□□ 1.25
TGFBR1-202ENST00000374994 PNPLA7Q6ZV29 1317 aa22.84■■□□□ 1.25
TGFBR1-202ENST00000374994 IQSEC2Q5JU85 1478 aa22.84■■□□□ 1.25
TGFBR1-202ENST00000374994 CHRNA3P32297 505 aa22.84■■□□□ 1.25
TGFBR1-202ENST00000374994 TTBK2Q6IQ55 1244 aa22.84■■□□□ 1.25
TGFBR1-202ENST00000374994 IQANK1A0A1B0GTG1 560 aa22.83■■□□□ 1.25
TGFBR1-202ENST00000374994 FAM170AA1A519 330 aa22.83■■□□□ 1.25
TGFBR1-202ENST00000374994 COG7P83436 770 aa22.83■■□□□ 1.25
TGFBR1-202ENST00000374994 NFRKBQ6P4R8 1299 aa22.83■■□□□ 1.25
TGFBR1-202ENST00000374994 EPC1Q9H2F5 836 aa22.83■■□□□ 1.25
TGFBR1-202ENST00000374994 PDIK1LQ8N165 341 aa22.83■■□□□ 1.25
TGFBR1-202ENST00000374994 HNRNPLLQ8WVV9 542 aaKnown RBP22.83■■□□□ 1.25
TGFBR1-202ENST00000374994 KMT5AQ9NQR1 393 aa22.83■■□□□ 1.25
TGFBR1-202ENST00000374994 BBOX1O75936 387 aa22.83■■□□□ 1.25
TGFBR1-202ENST00000374994 ADPGKQ9BRR6 497 aa22.83■■□□□ 1.25
TGFBR1-202ENST00000374994 SNX12Q9UMY4 172 aa22.83■■□□□ 1.25
TGFBR1-202ENST00000374994 SNX24Q9Y343 169 aa22.83■■□□□ 1.25
TGFBR1-202ENST00000374994 ATP1A1P05023 1023 aaKnown RBP22.83■■□□□ 1.25
TGFBR1-202ENST00000374994 BMP3P12645 472 aa22.83■■□□□ 1.25
TGFBR1-202ENST00000374994 DNAJC12Q9UKB3 198 aa22.83■■□□□ 1.25
TGFBR1-202ENST00000374994 A6NJR5 290 aa22.83■■□□□ 1.24
TGFBR1-202ENST00000374994 RFX1P22670 979 aa22.83■■□□□ 1.24
TGFBR1-202ENST00000374994 CASP1P29466 404 aa22.83■■□□□ 1.24
TGFBR1-202ENST00000374994 ATG16L1Q676U5 607 aa22.83■■□□□ 1.24
TGFBR1-202ENST00000374994 RIOK1Q9BRS2 568 aaKnown RBP22.83■■□□□ 1.24
TGFBR1-202ENST00000374994 L2HGDHQ9H9P8 463 aa22.83■■□□□ 1.24
TGFBR1-202ENST00000374994 MID2Q9UJV3 735 aa22.82■■□□□ 1.24
TGFBR1-202ENST00000374994 FAF1Q9UNN5 650 aaPredicted RBP22.82■■□□□ 1.24
TGFBR1-202ENST00000374994 LRRIQ4A6NIV6 560 aa22.82■■□□□ 1.24
TGFBR1-202ENST00000374994 CDK8P49336 464 aa22.82■■□□□ 1.24
TGFBR1-202ENST00000374994 RCN2Q14257 317 aa22.82■■□□□ 1.24
TGFBR1-202ENST00000374994 GRM4Q14833 912 aa22.82■■□□□ 1.24
TGFBR1-202ENST00000374994 CDC42BPGQ6DT37 1551 aa22.82■■□□□ 1.24
TGFBR1-202ENST00000374994 ESRRAP11474 423 aaPredicted RBP22.82■■□□□ 1.24
TGFBR1-202ENST00000374994 POLD1P28340 1107 aa22.82■■□□□ 1.24
TGFBR1-202ENST00000374994 HSPA2P54652 639 aa22.82■■□□□ 1.24
TGFBR1-202ENST00000374994 MAGOHP61326 146 aaKnown RBP22.82■■□□□ 1.24
TGFBR1-202ENST00000374994 CDC42BPAQ5VT25 1732 aa22.82■■□□□ 1.24
TGFBR1-202ENST00000374994 FAM160B1Q5W0V3 765 aa22.82■■□□□ 1.24
TGFBR1-202ENST00000374994 DYNLL2Q96FJ2 89 aa22.82■■□□□ 1.24
TGFBR1-202ENST00000374994 TTC25Q96NG3 672 aa22.82■■□□□ 1.24
TGFBR1-202ENST00000374994 TMEM60Q9H2L4 133 aa22.82■■□□□ 1.24
TGFBR1-202ENST00000374994 NRKQ7Z2Y5 1582 aa22.82■■□□□ 1.24
TGFBR1-202ENST00000374994 GPC4O75487 556 aa22.82■■□□□ 1.24
TGFBR1-202ENST00000374994 CPP00450 1065 aa22.82■■□□□ 1.24
TGFBR1-202ENST00000374994 PMS2P54278 862 aa22.82■■□□□ 1.24
TGFBR1-202ENST00000374994 GFPT1Q06210 699 aaPredicted RBP22.82■■□□□ 1.24
TGFBR1-202ENST00000374994 NR1I3Q14994 352 aa22.82■■□□□ 1.24
TGFBR1-202ENST00000374994 MUM1L1Q5H9M0 696 aa22.82■■□□□ 1.24
TGFBR1-202ENST00000374994 HACE1Q8IYU2 909 aa22.82■■□□□ 1.24
TGFBR1-202ENST00000374994 CHMP6Q96FZ7 201 aa22.82■■□□□ 1.24
TGFBR1-202ENST00000374994 EPS15L1Q9UBC2 864 aa22.82■■□□□ 1.24
TGFBR1-202ENST00000374994 SCNN1DP51172 638 aa22.82■■□□□ 1.24
TGFBR1-202ENST00000374994 TAF12Q16514 161 aa22.82■■□□□ 1.24
TGFBR1-202ENST00000374994 PDXDC1Q6P996 788 aa22.82■■□□□ 1.24
TGFBR1-202ENST00000374994 KCTD1Q719H9 257 aa22.82■■□□□ 1.24
TGFBR1-202ENST00000374994 HDAC6Q9UBN7 1215 aa22.82■■□□□ 1.24
TGFBR1-202ENST00000374994 KAT6BQ8WYB5 2073 aa22.82■■□□□ 1.24
TGFBR1-202ENST00000374994 ZSCAN20P17040 1043 aaPredicted RBP22.81■■□□□ 1.24
TGFBR1-202ENST00000374994 USP17L3A6NCW0 530 aa22.81■■□□□ 1.24
TGFBR1-202ENST00000374994 USP17L4A6NCW7 530 aa22.81■■□□□ 1.24
TGFBR1-202ENST00000374994 TFDP1Q14186 410 aa22.81■■□□□ 1.24
TGFBR1-202ENST00000374994 USP17L1Q7RTZ2 530 aa22.81■■□□□ 1.24
TGFBR1-202ENST00000374994 ADD3Q9UEY8 706 aaKnown RBP22.81■■□□□ 1.24
TGFBR1-202ENST00000374994 ADGRB3O60242 1522 aa22.81■■□□□ 1.24
TGFBR1-202ENST00000374994 CLEC4GQ6UXB4 293 aa22.81■■□□□ 1.24
TGFBR1-202ENST00000374994 TBK1Q9UHD2 729 aa22.81■■□□□ 1.24
TGFBR1-202ENST00000374994 IVNS1ABPQ9Y6Y0 642 aa22.81■■□□□ 1.24
TGFBR1-202ENST00000374994 GPC5P78333 572 aa22.81■■□□□ 1.24
TGFBR1-202ENST00000374994 MKRN3Q13064 507 aaKnown RBP22.81■■□□□ 1.24
TGFBR1-202ENST00000374994 MEIS1O00470 390 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms