RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 PTPAQ15257 358 aa12.79□□□□□ -0.36
HSPG2-202ENST00000374676 TMEM266Q2M3C6 531 aa12.79□□□□□ -0.36
HSPG2-202ENST00000374676 NBPF20Q3BBV1 942 aa12.79□□□□□ -0.36
HSPG2-202ENST00000374676 SWSAP1Q6NVH7 229 aa12.79□□□□□ -0.36
HSPG2-202ENST00000374676 NFRKBQ6P4R8 1299 aa12.79□□□□□ -0.36
HSPG2-202ENST00000374676 DTHD1Q6ZMT9 781 aa12.79□□□□□ -0.36
HSPG2-202ENST00000374676 CCDC60Q8IWA6 550 aaPredicted RBP12.79□□□□□ -0.36
HSPG2-202ENST00000374676 GLG1Q92896 1179 aa12.79□□□□□ -0.36
HSPG2-202ENST00000374676 USP28Q96RU2 1077 aa12.79□□□□□ -0.36
HSPG2-202ENST00000374676 ZNF302Q9NR11 478 aa12.79□□□□□ -0.36
HSPG2-202ENST00000374676 ERAP1Q9NZ08 941 aa12.79□□□□□ -0.36
HSPG2-202ENST00000374676 SAMM50Q9Y512 469 aa12.79□□□□□ -0.36
HSPG2-202ENST00000374676 ATP6V1DQ9Y5K8 247 aa12.79□□□□□ -0.36
HSPG2-202ENST00000374676 MAFBQ9Y5Q3 323 aaPredicted RBP12.79□□□□□ -0.36
HSPG2-202ENST00000374676 CLIC4Q9Y696 253 aa12.79□□□□□ -0.36
HSPG2-202ENST00000374676 BACH1O14867 736 aa12.78□□□□□ -0.36
HSPG2-202ENST00000374676 TECP42680 631 aa12.78□□□□□ -0.36
HSPG2-202ENST00000374676 PSMC6P62333 389 aa12.78□□□□□ -0.36
HSPG2-202ENST00000374676 SLC39A14Q15043 492 aa12.78□□□□□ -0.36
HSPG2-202ENST00000374676 KIAA0753Q2KHM9 967 aa12.78□□□□□ -0.36
HSPG2-202ENST00000374676 SESTD1Q86VW0 696 aa12.78□□□□□ -0.36
HSPG2-202ENST00000374676 TRIM50Q86XT4 487 aa12.78□□□□□ -0.36
HSPG2-202ENST00000374676 IGSF22Q8N9C0 903 aa12.78□□□□□ -0.36
HSPG2-202ENST00000374676 TNPO1Q92973 898 aaKnown RBP12.78□□□□□ -0.36
HSPG2-202ENST00000374676 TOX2Q96NM4 488 aa12.78□□□□□ -0.36
HSPG2-202ENST00000374676 IPO9Q96P70 1041 aaKnown RBP12.78□□□□□ -0.36
HSPG2-202ENST00000374676 RAB34Q9BZG1 259 aa12.78□□□□□ -0.36
HSPG2-202ENST00000374676 GABBR1Q9UBS5 961 aa12.78□□□□□ -0.36
HSPG2-202ENST00000374676 ALPK3Q96L96 1907 aa12.78□□□□□ -0.36
HSPG2-202ENST00000374676 DKC1O60832 514 aaKnown RBP eCLIP12.77□□□□□ -0.37
HSPG2-202ENST00000374676 P4HBP07237 508 aaKnown RBP12.77□□□□□ -0.37
HSPG2-202ENST00000374676 ATP4AP20648 1035 aa12.77□□□□□ -0.37
HSPG2-202ENST00000374676 ATN1P54259 1190 aaPredicted RBP12.77□□□□□ -0.37
HSPG2-202ENST00000374676 PLCB4Q15147 1175 aa12.77□□□□□ -0.37
HSPG2-202ENST00000374676 IL17AQ16552 155 aa12.77□□□□□ -0.37
HSPG2-202ENST00000374676 NCAPH2Q6IBW4 605 aa12.77□□□□□ -0.37
HSPG2-202ENST00000374676 PDXDC2PQ6P474 469 aa12.77□□□□□ -0.37
HSPG2-202ENST00000374676 ANKRD33Q7Z3H0 272 aa12.77□□□□□ -0.37
HSPG2-202ENST00000374676 NEK9Q8TD19 979 aa12.77□□□□□ -0.37
HSPG2-202ENST00000374676 ATP6V0A1Q93050 837 aa12.77□□□□□ -0.37
HSPG2-202ENST00000374676 HSD17B14Q9BPX1 270 aa12.77□□□□□ -0.37
HSPG2-202ENST00000374676 HTATIP2Q9BUP3 242 aa12.77□□□□□ -0.37
HSPG2-202ENST00000374676 FTOQ9C0B1 505 aaKnown RBP eCLIP12.77□□□□□ -0.37
HSPG2-202ENST00000374676 RNPEPQ9H4A4 650 aa12.77□□□□□ -0.37
HSPG2-202ENST00000374676 TFIP11Q9UBB9 837 aaKnown RBP12.77□□□□□ -0.37
HSPG2-202ENST00000374676 LRWD1Q9UFC0 647 aa12.77□□□□□ -0.37
HSPG2-202ENST00000374676 CFAP45Q9UL16 551 aa12.77□□□□□ -0.37
HSPG2-202ENST00000374676 STK24Q9Y6E0 443 aa12.77□□□□□ -0.37
HSPG2-202ENST00000374676 MROH7Q68CQ1 1323 aa12.77□□□□□ -0.37
HSPG2-202ENST00000374676 IGSF9BQ9UPX0 1349 aa12.77□□□□□ -0.37
HSPG2-202ENST00000374676 POTEMA6NI47 508 aa12.76□□□□□ -0.37
HSPG2-202ENST00000374676 ZNF862O60290 1169 aa12.76□□□□□ -0.37
HSPG2-202ENST00000374676 HBP1O60381 514 aa12.76□□□□□ -0.37
HSPG2-202ENST00000374676 SLITRK3O94933 977 aa12.76□□□□□ -0.37
HSPG2-202ENST00000374676 YEATS4O95619 227 aa12.76□□□□□ -0.37
HSPG2-202ENST00000374676 HOXC8P31273 242 aa12.76□□□□□ -0.37
HSPG2-202ENST00000374676 QARSP47897 775 aaKnown RBP12.76□□□□□ -0.37
HSPG2-202ENST00000374676 PSMC5P62195 406 aa12.76□□□□□ -0.37
HSPG2-202ENST00000374676 LRRC26Q2I0M4 334 aa12.76□□□□□ -0.37
HSPG2-202ENST00000374676 C7orf31Q8N865 590 aa12.76□□□□□ -0.37
HSPG2-202ENST00000374676 LINC00301Q8NCQ3 95 aa12.76□□□□□ -0.37
HSPG2-202ENST00000374676 ERMNQ8TAM6 284 aa12.76□□□□□ -0.37
HSPG2-202ENST00000374676 ATP8B4Q8TF62 1192 aa12.76□□□□□ -0.37
HSPG2-202ENST00000374676 BBXQ8WY36 941 aaPredicted RBP12.76□□□□□ -0.37
HSPG2-202ENST00000374676 FAM167AQ96KS9 214 aa12.76□□□□□ -0.37
HSPG2-202ENST00000374676 EIF2AK1Q9BQI3 630 aaKnown RBP12.76□□□□□ -0.37
HSPG2-202ENST00000374676 POLR3CQ9BUI4 534 aaPredicted RBP12.76□□□□□ -0.37
HSPG2-202ENST00000374676 NRBP2Q9NSY0 501 aa12.76□□□□□ -0.37
HSPG2-202ENST00000374676 HDAC6Q9UBN7 1215 aa12.76□□□□□ -0.37
HSPG2-202ENST00000374676 GTF2IRD1Q9UHL9 959 aa12.76□□□□□ -0.37
HSPG2-202ENST00000374676 RCOR1Q9UKL0 485 aa12.76□□□□□ -0.37
HSPG2-202ENST00000374676 SRPRBQ9Y5M8 271 aaKnown RBP12.76□□□□□ -0.37
HSPG2-202ENST00000374676 EVPLQ92817 2033 aa12.76□□□□□ -0.37
HSPG2-202ENST00000374676 POTEB3A0JP26 581 aa12.75□□□□□ -0.37
HSPG2-202ENST00000374676 VWA3AA6NCI4 1184 aa12.75□□□□□ -0.37
HSPG2-202ENST00000374676 RRN3P2A6NIE6 340 aa12.75□□□□□ -0.37
HSPG2-202ENST00000374676 PPP6R2O75170 966 aa12.75□□□□□ -0.37
HSPG2-202ENST00000374676 STBD1O95210 358 aa12.75□□□□□ -0.37
HSPG2-202ENST00000374676 LYPLA2O95372 231 aa12.75□□□□□ -0.37
HSPG2-202ENST00000374676 CD4P01730 458 aa12.75□□□□□ -0.37
HSPG2-202ENST00000374676 SMIM10L2AP0DMW4 78 aa12.75□□□□□ -0.37
HSPG2-202ENST00000374676 SMIM10L2BP0DMW5 78 aa12.75□□□□□ -0.37
HSPG2-202ENST00000374676 GNAT1P11488 350 aa12.75□□□□□ -0.37
HSPG2-202ENST00000374676 MUTP22033 750 aa12.75□□□□□ -0.37
HSPG2-202ENST00000374676 RTP1P59025 263 aa12.75□□□□□ -0.37
HSPG2-202ENST00000374676 CHMP4BP1P59074 171 aa12.75□□□□□ -0.37
HSPG2-202ENST00000374676 ADAM17P78536 824 aa12.75□□□□□ -0.37
HSPG2-202ENST00000374676 CEBPZQ03701 1054 aaKnown RBP12.75□□□□□ -0.37
HSPG2-202ENST00000374676 TLE2Q04725 743 aa12.75□□□□□ -0.37
HSPG2-202ENST00000374676 DNM1Q05193 864 aaKnown RBP12.75□□□□□ -0.37
HSPG2-202ENST00000374676 STK38Q15208 465 aa12.75□□□□□ -0.37
HSPG2-202ENST00000374676 UGCGQ16739 394 aa12.75□□□□□ -0.37
HSPG2-202ENST00000374676 XKR3Q5GH77 459 aa12.75□□□□□ -0.37
HSPG2-202ENST00000374676 ZNF484Q5JVG2 852 aa12.75□□□□□ -0.37
HSPG2-202ENST00000374676 POTEBQ6S5H4 581 aa12.75□□□□□ -0.37
HSPG2-202ENST00000374676 FAM126BQ8IXS8 530 aa12.75□□□□□ -0.37
HSPG2-202ENST00000374676 C4orf19Q8IY42 314 aa12.75□□□□□ -0.37
HSPG2-202ENST00000374676 NRCAMQ92823 1304 aa12.75□□□□□ -0.37
HSPG2-202ENST00000374676 DYDC2Q96IM9 177 aa12.75□□□□□ -0.37
HSPG2-202ENST00000374676 AK8Q96MA6 479 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms