RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 VTI1AQ96AJ9 217 aa16.9■□□□□ 0.3
HSPG2-201ENST00000374673 FTOQ9C0B1 505 aaKnown RBP eCLIP16.9■□□□□ 0.3
HSPG2-201ENST00000374673 ZNF302Q9NR11 478 aa16.9■□□□□ 0.3
HSPG2-201ENST00000374673 ERAP1Q9NZ08 941 aa16.9■□□□□ 0.3
HSPG2-201ENST00000374673 CIZ1Q9ULV3 898 aaPredicted RBP16.9■□□□□ 0.3
HSPG2-201ENST00000374673 MAFBQ9Y5Q3 323 aaPredicted RBP16.9■□□□□ 0.3
HSPG2-201ENST00000374673 KAT6AQ92794 2004 aa16.89■□□□□ 0.29
HSPG2-201ENST00000374673 POTEMA6NI47 508 aa16.89■□□□□ 0.29
HSPG2-201ENST00000374673 ARVCFO00192 962 aa16.89■□□□□ 0.29
HSPG2-201ENST00000374673 BACH1O14867 736 aa16.89■□□□□ 0.29
HSPG2-201ENST00000374673 TECP42680 631 aa16.89■□□□□ 0.29
HSPG2-201ENST00000374673 NASPP49321 788 aaPredicted RBP16.89■□□□□ 0.29
HSPG2-201ENST00000374673 RGS19P49795 217 aa16.89■□□□□ 0.29
HSPG2-201ENST00000374673 CDK7P50613 346 aa16.89■□□□□ 0.29
HSPG2-201ENST00000374673 PTPN11Q06124 597 aaPredicted RBP16.89■□□□□ 0.29
HSPG2-201ENST00000374673 NBPF20Q3BBV1 942 aa16.89■□□□□ 0.29
HSPG2-201ENST00000374673 NFRKBQ6P4R8 1299 aa16.89■□□□□ 0.29
HSPG2-201ENST00000374673 DTHD1Q6ZMT9 781 aa16.89■□□□□ 0.29
HSPG2-201ENST00000374673 SESTD1Q86VW0 696 aa16.89■□□□□ 0.29
HSPG2-201ENST00000374673 IPO9Q96P70 1041 aaKnown RBP16.89■□□□□ 0.29
HSPG2-201ENST00000374673 GABBR1Q9UBS5 961 aa16.89■□□□□ 0.29
HSPG2-201ENST00000374673 ATP6V1DQ9Y5K8 247 aa16.89■□□□□ 0.29
HSPG2-201ENST00000374673 TCHHQ07283 1943 aa16.88■□□□□ 0.29
HSPG2-201ENST00000374673 ATN1P54259 1190 aaPredicted RBP16.88■□□□□ 0.29
HSPG2-201ENST00000374673 PDIA5Q14554 519 aa16.88■□□□□ 0.29
HSPG2-201ENST00000374673 IL17AQ16552 155 aa16.88■□□□□ 0.29
HSPG2-201ENST00000374673 LRRC26Q2I0M4 334 aa16.88■□□□□ 0.29
HSPG2-201ENST00000374673 PDXDC2PQ6P474 469 aa16.88■□□□□ 0.29
HSPG2-201ENST00000374673 IGSF22Q8N9C0 903 aa16.88■□□□□ 0.29
HSPG2-201ENST00000374673 NEK9Q8TD19 979 aa16.88■□□□□ 0.29
HSPG2-201ENST00000374673 HTATIP2Q9BUP3 242 aa16.88■□□□□ 0.29
HSPG2-201ENST00000374673 RAB34Q9BZG1 259 aa16.88■□□□□ 0.29
HSPG2-201ENST00000374673 MROH7Q68CQ1 1323 aa16.88■□□□□ 0.29
HSPG2-201ENST00000374673 YEATS4O95619 227 aa16.87■□□□□ 0.29
HSPG2-201ENST00000374673 P4HBP07237 508 aaKnown RBP16.87■□□□□ 0.29
HSPG2-201ENST00000374673 ATP4AP20648 1035 aa16.87■□□□□ 0.29
HSPG2-201ENST00000374673 CEBPZQ03701 1054 aaKnown RBP16.87■□□□□ 0.29
HSPG2-201ENST00000374673 SLC39A14Q15043 492 aa16.87■□□□□ 0.29
HSPG2-201ENST00000374673 PLCB4Q15147 1175 aa16.87■□□□□ 0.29
HSPG2-201ENST00000374673 UGCGQ16739 394 aa16.87■□□□□ 0.29
HSPG2-201ENST00000374673 ANKRD33Q7Z3H0 272 aa16.87■□□□□ 0.29
HSPG2-201ENST00000374673 LINC00301Q8NCQ3 95 aa16.87■□□□□ 0.29
HSPG2-201ENST00000374673 ATP6V0A1Q93050 837 aa16.87■□□□□ 0.29
HSPG2-201ENST00000374673 RNPEPQ9H4A4 650 aa16.87■□□□□ 0.29
HSPG2-201ENST00000374673 GTF2IRD1Q9UHL9 959 aa16.87■□□□□ 0.29
HSPG2-201ENST00000374673 ZNF862O60290 1169 aa16.86■□□□□ 0.29
HSPG2-201ENST00000374673 DKC1O60832 514 aaKnown RBP eCLIP16.86■□□□□ 0.29
HSPG2-201ENST00000374673 CAPN15O75808 1086 aa16.86■□□□□ 0.29
HSPG2-201ENST00000374673 MARK3P27448 753 aa16.86■□□□□ 0.29
HSPG2-201ENST00000374673 HOXC8P31273 242 aa16.86■□□□□ 0.29
HSPG2-201ENST00000374673 QARSP47897 775 aaKnown RBP16.86■□□□□ 0.29
HSPG2-201ENST00000374673 RTP1P59025 263 aa16.86■□□□□ 0.29
HSPG2-201ENST00000374673 PSMC5P62195 406 aa16.86■□□□□ 0.29
HSPG2-201ENST00000374673 DNM1Q05193 864 aaKnown RBP16.86■□□□□ 0.29
HSPG2-201ENST00000374673 FOXD4L6Q3SYB3 417 aaPredicted RBP16.86■□□□□ 0.29
HSPG2-201ENST00000374673 TRIM60Q495X7 471 aa16.86■□□□□ 0.29
HSPG2-201ENST00000374673 FOXD4L3Q6VB84 417 aaPredicted RBP16.86■□□□□ 0.29
HSPG2-201ENST00000374673 FAM126BQ8IXS8 530 aa16.86■□□□□ 0.29
HSPG2-201ENST00000374673 C7orf31Q8N865 590 aa16.86■□□□□ 0.29
HSPG2-201ENST00000374673 BANK1Q8NDB2 785 aa16.86■□□□□ 0.29
HSPG2-201ENST00000374673 ERMNQ8TAM6 284 aa16.86■□□□□ 0.29
HSPG2-201ENST00000374673 ATP8B4Q8TF62 1192 aa16.86■□□□□ 0.29
HSPG2-201ENST00000374673 BBXQ8WY36 941 aaPredicted RBP16.86■□□□□ 0.29
HSPG2-201ENST00000374673 TNPO1Q92973 898 aaKnown RBP16.86■□□□□ 0.29
HSPG2-201ENST00000374673 FAM167AQ96KS9 214 aa16.86■□□□□ 0.29
HSPG2-201ENST00000374673 TOX2Q96NM4 488 aa16.86■□□□□ 0.29
HSPG2-201ENST00000374673 HSD17B14Q9BPX1 270 aa16.86■□□□□ 0.29
HSPG2-201ENST00000374673 EIF2AK1Q9BQI3 630 aaKnown RBP16.86■□□□□ 0.29
HSPG2-201ENST00000374673 TFIP11Q9UBB9 837 aaKnown RBP16.86■□□□□ 0.29
HSPG2-201ENST00000374673 HDAC6Q9UBN7 1215 aa16.86■□□□□ 0.29
HSPG2-201ENST00000374673 LRWD1Q9UFC0 647 aa16.86■□□□□ 0.29
HSPG2-201ENST00000374673 CFAP45Q9UL16 551 aa16.86■□□□□ 0.29
HSPG2-201ENST00000374673 STK24Q9Y6E0 443 aa16.86■□□□□ 0.29
HSPG2-201ENST00000374673 TRIP12Q14669 1992 aaPredicted RBP16.86■□□□□ 0.29
HSPG2-201ENST00000374673 ARID2Q68CP9 1835 aa16.85■□□□□ 0.29
HSPG2-201ENST00000374673 POTEB3A0JP26 581 aa16.85■□□□□ 0.29
HSPG2-201ENST00000374673 VWA3AA6NCI4 1184 aa16.85■□□□□ 0.29
HSPG2-201ENST00000374673 HBP1O60381 514 aa16.85■□□□□ 0.29
HSPG2-201ENST00000374673 SLITRK3O94933 977 aa16.85■□□□□ 0.29
HSPG2-201ENST00000374673 SMIM10L2AP0DMW4 78 aa16.85■□□□□ 0.29
HSPG2-201ENST00000374673 SMIM10L2BP0DMW5 78 aa16.85■□□□□ 0.29
HSPG2-201ENST00000374673 CHMP4BP1P59074 171 aa16.85■□□□□ 0.29
HSPG2-201ENST00000374673 STK38Q15208 465 aa16.85■□□□□ 0.29
HSPG2-201ENST00000374673 FAM47CQ5HY64 1035 aa16.85■□□□□ 0.29
HSPG2-201ENST00000374673 HAUS3Q68CZ6 603 aa16.85■□□□□ 0.29
HSPG2-201ENST00000374673 POTEBQ6S5H4 581 aa16.85■□□□□ 0.29
HSPG2-201ENST00000374673 C4orf19Q8IY42 314 aa16.85■□□□□ 0.29
HSPG2-201ENST00000374673 DYDC2Q96IM9 177 aa16.85■□□□□ 0.29
HSPG2-201ENST00000374673 LXNQ9BS40 222 aa16.85■□□□□ 0.29
HSPG2-201ENST00000374673 TUFT1Q9NNX1 390 aa16.85■□□□□ 0.29
HSPG2-201ENST00000374673 RGL1Q9NZL6 768 aa16.85■□□□□ 0.29
HSPG2-201ENST00000374673 FBXO2Q9UK22 296 aaPredicted RBP16.85■□□□□ 0.29
HSPG2-201ENST00000374673 SRPRBQ9Y5M8 271 aaKnown RBP16.85■□□□□ 0.29
HSPG2-201ENST00000374673 NRCAMQ92823 1304 aa16.85■□□□□ 0.29
HSPG2-201ENST00000374673 LOXHD1Q8IVV2 1947 aa16.84■□□□□ 0.29
HSPG2-201ENST00000374673 PPP6R2O75170 966 aa16.84■□□□□ 0.29
HSPG2-201ENST00000374673 LYPLA2O95372 231 aa16.84■□□□□ 0.29
HSPG2-201ENST00000374673 CD4P01730 458 aa16.84■□□□□ 0.29
HSPG2-201ENST00000374673 OATP04181 439 aa16.84■□□□□ 0.29
HSPG2-201ENST00000374673 MUTP22033 750 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms