RNA–Protein interactions for RNA: ENST00000374358.4

TMEM50A-201, Transcript of transmembrane protein 50A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50A, Length 2,683 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-201ENST00000374358 IQCEQ6IPM2 695 aa17.14■□□□□ 0.33
TMEM50A-201ENST00000374358 GOLGA5Q8TBA6 731 aa17.14■□□□□ 0.33
TMEM50A-201ENST00000374358 GANQ9H2C0 597 aa17.14■□□□□ 0.33
TMEM50A-201ENST00000374358 AJAP1Q9UKB5 411 aaPredicted RBP17.14■□□□□ 0.33
TMEM50A-201ENST00000374358 HDAC9Q9UKV0 1011 aa17.14■□□□□ 0.33
TMEM50A-201ENST00000374358 USP11P51784 963 aa17.13■□□□□ 0.33
TMEM50A-201ENST00000374358 KLHL30Q0D2K2 578 aa17.13■□□□□ 0.33
TMEM50A-201ENST00000374358 MUM1L1Q5H9M0 696 aa17.13■□□□□ 0.33
TMEM50A-201ENST00000374358 COL23A1Q86Y22 540 aaPredicted RBP17.13■□□□□ 0.33
TMEM50A-201ENST00000374358 TSEN2Q8NCE0 465 aaKnown RBP17.13■□□□□ 0.33
TMEM50A-201ENST00000374358 CCDC17Q96LX7 622 aa17.13■□□□□ 0.33
TMEM50A-201ENST00000374358 ZDHHC15Q96MV8 337 aa17.13■□□□□ 0.33
TMEM50A-201ENST00000374358 RUSC1Q9BVN2 902 aa17.13■□□□□ 0.33
TMEM50A-201ENST00000374358 EHD4Q9H223 541 aa17.13■□□□□ 0.33
TMEM50A-201ENST00000374358 BHMT2Q9H2M3 363 aa17.13■□□□□ 0.33
TMEM50A-201ENST00000374358 FAM184BQ9ULE4 1060 aa17.13■□□□□ 0.33
TMEM50A-201ENST00000374358 FRMD3A2A2Y4 597 aa17.13■□□□□ 0.33
TMEM50A-201ENST00000374358 EML1O00423 815 aa17.13■□□□□ 0.33
TMEM50A-201ENST00000374358 ZBTB39O15060 712 aa17.13■□□□□ 0.33
TMEM50A-201ENST00000374358 CLIC2O15247 247 aa17.13■□□□□ 0.33
TMEM50A-201ENST00000374358 NPR1P16066 1061 aa17.13■□□□□ 0.33
TMEM50A-201ENST00000374358 IRX5P78411 483 aaPredicted RBP17.13■□□□□ 0.33
TMEM50A-201ENST00000374358 SLC27A3Q5K4L6 730 aa17.13■□□□□ 0.33
TMEM50A-201ENST00000374358 LEKR1Q6ZMV7 388 aa17.13■□□□□ 0.33
TMEM50A-201ENST00000374358 TDRD3Q9H7E2 651 aaKnown RBP17.13■□□□□ 0.33
TMEM50A-201ENST00000374358 SPATA31A6Q5VVP1 1343 aa17.12■□□□□ 0.33
TMEM50A-201ENST00000374358 GOLGA6BA6NDN3 693 aa17.12■□□□□ 0.33
TMEM50A-201ENST00000374358 RBAK-RBAKDNI3L0D1 243 aa17.12■□□□□ 0.33
TMEM50A-201ENST00000374358 ONECUT3O60422 494 aaPredicted RBP17.12■□□□□ 0.33
TMEM50A-201ENST00000374358 GH2P01242 217 aa17.12■□□□□ 0.33
TMEM50A-201ENST00000374358 MMP10P09238 476 aa17.12■□□□□ 0.33
TMEM50A-201ENST00000374358 UBXN2AP68543 259 aa17.12■□□□□ 0.33
TMEM50A-201ENST00000374358 PTK2Q05397 1052 aa17.12■□□□□ 0.33
TMEM50A-201ENST00000374358 SLC18A3Q16572 532 aa17.12■□□□□ 0.33
TMEM50A-201ENST00000374358 TCERG1LQ5VWI1 586 aa17.12■□□□□ 0.33
TMEM50A-201ENST00000374358 GJB7Q6PEY0 223 aa17.12■□□□□ 0.33
TMEM50A-201ENST00000374358 SAMD1Q6SPF0 538 aaPredicted RBP17.12■□□□□ 0.33
TMEM50A-201ENST00000374358 AFAP1L1Q8TED9 768 aa17.12■□□□□ 0.33
TMEM50A-201ENST00000374358 PIGOQ8TEQ8 1089 aa17.12■□□□□ 0.33
TMEM50A-201ENST00000374358 AMNQ9BXJ7 453 aa17.12■□□□□ 0.33
TMEM50A-201ENST00000374358 PI4KBQ9UBF8 816 aa17.12■□□□□ 0.33
TMEM50A-201ENST00000374358 CYP3A7-CYP3A51PA0A087WV96 503 aa17.12■□□□□ 0.33
TMEM50A-201ENST00000374358 A0A1W2PRG0 241 aa17.12■□□□□ 0.33
TMEM50A-201ENST00000374358 SPDYE3A6NKU9 549 aa17.12■□□□□ 0.33
TMEM50A-201ENST00000374358 CETN3O15182 167 aa17.12■□□□□ 0.33
TMEM50A-201ENST00000374358 MSH4O15457 936 aa17.12■□□□□ 0.33
TMEM50A-201ENST00000374358 AKAP3O75969 853 aa17.12■□□□□ 0.33
TMEM50A-201ENST00000374358 GLI1P08151 1106 aa17.12■□□□□ 0.33
TMEM50A-201ENST00000374358 CYP3A7P24462 503 aa17.12■□□□□ 0.33
TMEM50A-201ENST00000374358 TRADDQ15628 312 aa17.12■□□□□ 0.33
TMEM50A-201ENST00000374358 C8orf74Q6P047 294 aa17.12■□□□□ 0.33
TMEM50A-201ENST00000374358 KSR1Q8IVT5 923 aa17.12■□□□□ 0.33
TMEM50A-201ENST00000374358 DCAF4Q8WV16 495 aa17.12■□□□□ 0.33
TMEM50A-201ENST00000374358 MBOAT7Q96N66 472 aa17.12■□□□□ 0.33
TMEM50A-201ENST00000374358 RABEP2Q9H5N1 569 aa17.12■□□□□ 0.33
TMEM50A-201ENST00000374358 STIM2Q9P246 746 aa17.12■□□□□ 0.33
TMEM50A-201ENST00000374358 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.12■□□□□ 0.33
TMEM50A-201ENST00000374358 ANKRD65E5RJM6 399 aa17.11■□□□□ 0.33
TMEM50A-201ENST00000374358 CHMP2AO43633 222 aa17.11■□□□□ 0.33
TMEM50A-201ENST00000374358 PRLRP16471 622 aa17.11■□□□□ 0.33
TMEM50A-201ENST00000374358 ASIC2Q16515 512 aa17.11■□□□□ 0.33
TMEM50A-201ENST00000374358 CCDC70Q6NSX1 233 aa17.11■□□□□ 0.33
TMEM50A-201ENST00000374358 ZNF572Q7Z3I7 529 aaPredicted RBP17.11■□□□□ 0.33
TMEM50A-201ENST00000374358 FBXO11Q86XK2 927 aa17.11■□□□□ 0.33
TMEM50A-201ENST00000374358 SLFN12Q8IYM2 578 aa17.11■□□□□ 0.33
TMEM50A-201ENST00000374358 MKL1Q969V6 931 aa17.11■□□□□ 0.33
TMEM50A-201ENST00000374358 NYAP2Q9P242 653 aa17.11■□□□□ 0.33
TMEM50A-201ENST00000374358 C10orf71Q711Q0 1435 aa17.11■□□□□ 0.33
TMEM50A-201ENST00000374358 PAFAH1B1P43034 410 aa17.11■□□□□ 0.33
TMEM50A-201ENST00000374358 MARSP56192 900 aaKnown RBP17.11■□□□□ 0.33
TMEM50A-201ENST00000374358 LRRC31Q6UY01 552 aa17.11■□□□□ 0.33
TMEM50A-201ENST00000374358 ZNF571Q7Z3V5 609 aaPredicted RBP17.11■□□□□ 0.33
TMEM50A-201ENST00000374358 RBM46Q8TBY0 533 aaKnown RBP17.11■□□□□ 0.33
TMEM50A-201ENST00000374358 EDEM3Q9BZQ6 932 aa17.11■□□□□ 0.33
TMEM50A-201ENST00000374358 DNM3Q9UQ16 869 aa17.11■□□□□ 0.33
TMEM50A-201ENST00000374358 TRIM66O15016 1216 aa17.1■□□□□ 0.33
TMEM50A-201ENST00000374358 ECE1P42892 770 aa17.1■□□□□ 0.33
TMEM50A-201ENST00000374358 CTTNQ14247 550 aaKnown RBP17.1■□□□□ 0.33
TMEM50A-201ENST00000374358 NAB2Q15742 525 aa17.1■□□□□ 0.33
TMEM50A-201ENST00000374358 ABCB5Q2M3G0 1257 aa17.1■□□□□ 0.33
TMEM50A-201ENST00000374358 DNAJC21Q5F1R6 531 aaKnown RBP17.1■□□□□ 0.33
TMEM50A-201ENST00000374358 PROCA1Q8NCQ7 364 aaPredicted RBP17.1■□□□□ 0.33
TMEM50A-201ENST00000374358 ARMCX3Q9UH62 379 aaPredicted RBP17.1■□□□□ 0.33
TMEM50A-201ENST00000374358 GRID2IPA4D2P6 1211 aa17.1■□□□□ 0.33
TMEM50A-201ENST00000374358 ECE2O60344 883 aa17.1■□□□□ 0.33
TMEM50A-201ENST00000374358 GCNT3O95395 438 aa17.1■□□□□ 0.33
TMEM50A-201ENST00000374358 GNA14O95837 355 aa17.1■□□□□ 0.33
TMEM50A-201ENST00000374358 RPA1P27694 616 aa17.1■□□□□ 0.33
TMEM50A-201ENST00000374358 KNOP1Q1ED39 458 aaKnown RBP17.1■□□□□ 0.33
TMEM50A-201ENST00000374358 DACT2Q5SW24 774 aa17.1■□□□□ 0.33
TMEM50A-201ENST00000374358 DPY19L2P1Q6NXN4 242 aa17.1■□□□□ 0.33
TMEM50A-201ENST00000374358 FOXR2Q6PJQ5 311 aa17.1■□□□□ 0.33
TMEM50A-201ENST00000374358 VAV3Q9UKW4 847 aa17.1■□□□□ 0.33
TMEM50A-201ENST00000374358 ASTN1O14525 1302 aa17.09■□□□□ 0.33
TMEM50A-201ENST00000374358 FAM153BP0C7A2 387 aa17.09■□□□□ 0.33
TMEM50A-201ENST00000374358 UCHL3P15374 230 aa17.09■□□□□ 0.33
TMEM50A-201ENST00000374358 CARSP49589 748 aaKnown RBP17.09■□□□□ 0.33
TMEM50A-201ENST00000374358 AP3B2Q13367 1082 aa17.09■□□□□ 0.33
TMEM50A-201ENST00000374358 FAM153CQ494X1 144 aa17.09■□□□□ 0.33
TMEM50A-201ENST00000374358 KIAA1755Q5JYT7 1200 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms