RNA–Protein interactions for RNA: ENST00000374218.6

PTPN20-201, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN20, Length 2,872 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-201ENST00000374218 ZNF302Q9NR11 478 aa10.24□□□□□ -0.77
PTPN20-201ENST00000374218 KIAA1024Q9UPX6 916 aa10.24□□□□□ -0.77
PTPN20-201ENST00000374218 GNEQ9Y223 722 aaKnown RBP10.24□□□□□ -0.77
PTPN20-201ENST00000374218 HPSEQ9Y251 543 aa10.24□□□□□ -0.77
PTPN20-201ENST00000374218 KPNA6O60684 536 aa10.23□□□□□ -0.77
PTPN20-201ENST00000374218 ZNF202O95125 648 aa10.23□□□□□ -0.77
PTPN20-201ENST00000374218 ATG7O95352 703 aa10.23□□□□□ -0.77
PTPN20-201ENST00000374218 TCF7P36402 384 aaPredicted RBP10.23□□□□□ -0.77
PTPN20-201ENST00000374218 AMPD3Q01432 767 aa10.23□□□□□ -0.77
PTPN20-201ENST00000374218 HSDL1Q3SXM5 330 aa10.23□□□□□ -0.77
PTPN20-201ENST00000374218 HYIQ5T013 277 aa10.23□□□□□ -0.77
PTPN20-201ENST00000374218 OTUD6AQ7L8S5 288 aa10.23□□□□□ -0.77
PTPN20-201ENST00000374218 CKAP2LQ8IYA6 745 aa10.23□□□□□ -0.77
PTPN20-201ENST00000374218 CNNM3Q8NE01 707 aa10.23□□□□□ -0.77
PTPN20-201ENST00000374218 AFG1LQ8WV93 481 aa10.23□□□□□ -0.77
PTPN20-201ENST00000374218 DHX58Q96C10 678 aa10.23□□□□□ -0.77
PTPN20-201ENST00000374218 DYDC2Q96IM9 177 aa10.23□□□□□ -0.77
PTPN20-201ENST00000374218 LXNQ9BS40 222 aa10.23□□□□□ -0.77
PTPN20-201ENST00000374218 SMARCAD1Q9H4L7 1026 aa10.23□□□□□ -0.77
PTPN20-201ENST00000374218 DACT1Q9NYF0 836 aa10.23□□□□□ -0.77
PTPN20-201ENST00000374218 GABBR1Q9UBS5 961 aa10.23□□□□□ -0.77
PTPN20-201ENST00000374218 ZNFX1Q9P2E3 1918 aaKnown RBP10.23□□□□□ -0.77
PTPN20-201ENST00000374218 SLITRK3O94933 977 aa10.23□□□□□ -0.77
PTPN20-201ENST00000374218 XRCC6P12956 609 aaKnown RBP eCLIP10.23□□□□□ -0.77
PTPN20-201ENST00000374218 STAT5BP51692 787 aa10.23□□□□□ -0.77
PTPN20-201ENST00000374218 KLHL40Q2TBA0 621 aa10.23□□□□□ -0.77
PTPN20-201ENST00000374218 PDXDC2PQ6P474 469 aa10.23□□□□□ -0.77
PTPN20-201ENST00000374218 FMR1NBQ8N0W7 255 aaPredicted RBP10.23□□□□□ -0.77
PTPN20-201ENST00000374218 TRPV1Q8NER1 839 aa10.23□□□□□ -0.77
PTPN20-201ENST00000374218 FAM167AQ96KS9 214 aa10.23□□□□□ -0.77
PTPN20-201ENST00000374218 TIGD1Q96MW7 591 aa10.23□□□□□ -0.77
PTPN20-201ENST00000374218 MMTAG2Q9BU76 263 aaKnown RBP10.23□□□□□ -0.77
PTPN20-201ENST00000374218 NRBP2Q9NSY0 501 aa10.23□□□□□ -0.77
PTPN20-201ENST00000374218 BMP2KQ9NSY1 1161 aaPredicted RBP10.23□□□□□ -0.77
PTPN20-201ENST00000374218 RGL1Q9NZL6 768 aa10.23□□□□□ -0.77
PTPN20-201ENST00000374218 DDX20Q9UHI6 824 aaKnown RBP10.23□□□□□ -0.77
PTPN20-201ENST00000374218 ZNF215Q9UL58 517 aaPredicted RBP10.23□□□□□ -0.77
PTPN20-201ENST00000374218 LYPLA2O95372 231 aa10.22□□□□□ -0.77
PTPN20-201ENST00000374218 SLFN14P0C7P3 912 aa10.22□□□□□ -0.77
PTPN20-201ENST00000374218 PLCG1P19174 1290 aa10.22□□□□□ -0.77
PTPN20-201ENST00000374218 TRIM32Q13049 653 aa10.22□□□□□ -0.77
PTPN20-201ENST00000374218 CTTNQ14247 550 aaKnown RBP10.22□□□□□ -0.77
PTPN20-201ENST00000374218 PLPPR4Q7Z2D5 763 aa10.22□□□□□ -0.77
PTPN20-201ENST00000374218 C4orf19Q8IY42 314 aa10.22□□□□□ -0.77
PTPN20-201ENST00000374218 GOLPH3LQ9H4A5 285 aa10.22□□□□□ -0.77
PTPN20-201ENST00000374218 BCAS3Q9H6U6 928 aa10.22□□□□□ -0.77
PTPN20-201ENST00000374218 XPNPEP3Q9NQH7 507 aa10.22□□□□□ -0.77
PTPN20-201ENST00000374218 GSTTP1A0A1W2PQM5 241 aa10.22□□□□□ -0.77
PTPN20-201ENST00000374218 A6NJR5 290 aa10.22□□□□□ -0.77
PTPN20-201ENST00000374218 TRAK2O60296 914 aa10.22□□□□□ -0.77
PTPN20-201ENST00000374218 MED24O75448 989 aa10.22□□□□□ -0.77
PTPN20-201ENST00000374218 NR1I2O75469 434 aa10.22□□□□□ -0.77
PTPN20-201ENST00000374218 SPATA31C1P0DKV0 1188 aa10.22□□□□□ -0.77
PTPN20-201ENST00000374218 LIG1P18858 919 aa10.22□□□□□ -0.77
PTPN20-201ENST00000374218 GJC2Q5T442 439 aaPredicted RBP10.22□□□□□ -0.77
PTPN20-201ENST00000374218 UTP14CQ5TAP6 766 aaKnown RBP10.22□□□□□ -0.77
PTPN20-201ENST00000374218 BANK1Q8NDB2 785 aa10.22□□□□□ -0.77
PTPN20-201ENST00000374218 ENGASEQ8NFI3 743 aa10.22□□□□□ -0.77
PTPN20-201ENST00000374218 PLIN2Q99541 437 aa10.22□□□□□ -0.77
PTPN20-201ENST00000374218 PRDM10Q9NQV6 1147 aa10.22□□□□□ -0.77
PTPN20-201ENST00000374218 ERAP1Q9NZ08 941 aa10.22□□□□□ -0.77
PTPN20-201ENST00000374218 MGAMO43451 1857 aa10.22□□□□□ -0.77
PTPN20-201ENST00000374218 LCTP09848 1927 aa10.22□□□□□ -0.77
PTPN20-201ENST00000374218 POTEB3A0JP26 581 aa10.21□□□□□ -0.77
PTPN20-201ENST00000374218 POTEFA5A3E0 1075 aa10.21□□□□□ -0.77
PTPN20-201ENST00000374218 CTAGE5O15320 804 aa10.21□□□□□ -0.77
PTPN20-201ENST00000374218 C6orf222P0C671 652 aaPredicted RBP10.21□□□□□ -0.77
PTPN20-201ENST00000374218 CCND3P30281 292 aaPredicted RBP10.21□□□□□ -0.77
PTPN20-201ENST00000374218 GJA9P57773 515 aa10.21□□□□□ -0.77
PTPN20-201ENST00000374218 GRB10Q13322 594 aa10.21□□□□□ -0.77
PTPN20-201ENST00000374218 FSCN1Q16658 493 aaKnown RBP10.21□□□□□ -0.77
PTPN20-201ENST00000374218 TMEM119Q4V9L6 283 aa10.21□□□□□ -0.77
PTPN20-201ENST00000374218 XKR3Q5GH77 459 aa10.21□□□□□ -0.77
PTPN20-201ENST00000374218 POTEBQ6S5H4 581 aa10.21□□□□□ -0.77
PTPN20-201ENST00000374218 POTEGQ6S5H5 508 aa10.21□□□□□ -0.77
PTPN20-201ENST00000374218 SV2BQ7L1I2 683 aa10.21□□□□□ -0.77
PTPN20-201ENST00000374218 RNF180Q86T96 592 aa10.21□□□□□ -0.77
PTPN20-201ENST00000374218 AFAP1L1Q8TED9 768 aa10.21□□□□□ -0.77
PTPN20-201ENST00000374218 SH3TC2Q8TF17 1288 aa10.21□□□□□ -0.77
PTPN20-201ENST00000374218 EMSYQ7Z589 1322 aa10.21□□□□□ -0.77
PTPN20-201ENST00000374218 DOCK3Q8IZD9 2030 aa10.21□□□□□ -0.77
PTPN20-201ENST00000374218 PLXNA1Q9UIW2 1896 aa10.21□□□□□ -0.77
PTPN20-201ENST00000374218 MYH15Q9Y2K3 1946 aa10.21□□□□□ -0.77
PTPN20-201ENST00000374218 CASP8AP2Q9UKL3 1982 aa10.21□□□□□ -0.78
PTPN20-201ENST00000374218 IGKV6D-21A0A0A0MT36 114 aa10.21□□□□□ -0.78
PTPN20-201ENST00000374218 MMP3P08254 477 aa10.21□□□□□ -0.78
PTPN20-201ENST00000374218 SNW1Q13573 536 aaKnown RBP10.21□□□□□ -0.78
PTPN20-201ENST00000374218 GNASQ5JWF2 1037 aa10.21□□□□□ -0.78
PTPN20-201ENST00000374218 KRBA2Q6ZNG9 492 aa10.21□□□□□ -0.78
PTPN20-201ENST00000374218 CCDC60Q8IWA6 550 aaPredicted RBP10.21□□□□□ -0.78
PTPN20-201ENST00000374218 PCSK9Q8NBP7 692 aaKnown RBP10.21□□□□□ -0.78
PTPN20-201ENST00000374218 ARRDC4Q8NCT1 418 aa10.21□□□□□ -0.78
PTPN20-201ENST00000374218 GPT2Q8TD30 523 aa10.21□□□□□ -0.78
PTPN20-201ENST00000374218 NUP62CLQ9H1M0 184 aa10.21□□□□□ -0.78
PTPN20-201ENST00000374218 ANKEF1Q9NU02 776 aa10.21□□□□□ -0.78
PTPN20-201ENST00000374218 MAFBQ9Y5Q3 323 aaPredicted RBP10.21□□□□□ -0.78
PTPN20-201ENST00000374218 LGR5O75473 907 aa10.2□□□□□ -0.78
PTPN20-201ENST00000374218 EYA4O95677 639 aa10.2□□□□□ -0.78
PTPN20-201ENST00000374218 SSBP05455 408 aaKnown RBP eCLIP10.2□□□□□ -0.78
PTPN20-201ENST00000374218 MYL1P05976 194 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms