RNA–Protein interactions for RNA: ENST00000373839.7

PHACTR4-202, Transcript of phosphatase and actin regulator 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHACTR4, Length 6,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-202ENST00000373839 CNPY4Q8N129 248 aa11.97□□□□□ -0.49
PHACTR4-202ENST00000373839 UBE2TQ9NPD8 197 aaPredicted RBP11.97□□□□□ -0.49
PHACTR4-202ENST00000373839 HIP1RO75146 1068 aa11.97□□□□□ -0.49
PHACTR4-202ENST00000373839 STMN1P16949 149 aa11.97□□□□□ -0.49
PHACTR4-202ENST00000373839 SAT1P21673 171 aa11.97□□□□□ -0.49
PHACTR4-202ENST00000373839 PRELPP51888 382 aa11.97□□□□□ -0.49
PHACTR4-202ENST00000373839 MTMR1Q13613 665 aa11.97□□□□□ -0.49
PHACTR4-202ENST00000373839 BEST2Q8NFU1 509 aa11.97□□□□□ -0.49
PHACTR4-202ENST00000373839 DYNLL2Q96FJ2 89 aa11.97□□□□□ -0.49
PHACTR4-202ENST00000373839 RMDN3Q96TC7 470 aa11.97□□□□□ -0.49
PHACTR4-202ENST00000373839 MTIF3Q9H2K0 278 aaKnown RBP11.97□□□□□ -0.49
PHACTR4-202ENST00000373839 HERC5Q9UII4 1024 aaKnown RBP11.97□□□□□ -0.49
PHACTR4-202ENST00000373839 ECE2O60344 883 aa11.96□□□□□ -0.49
PHACTR4-202ENST00000373839 EPHB4P54760 987 aa11.96□□□□□ -0.49
PHACTR4-202ENST00000373839 ZBTB33Q86T24 672 aa11.96□□□□□ -0.49
PHACTR4-202ENST00000373839 ZNF589Q86UQ0 364 aaPredicted RBP11.96□□□□□ -0.49
PHACTR4-202ENST00000373839 RASEFQ8IZ41 740 aa11.96□□□□□ -0.49
PHACTR4-202ENST00000373839 MICAL1Q8TDZ2 1067 aa11.96□□□□□ -0.49
PHACTR4-202ENST00000373839 CD209Q9NNX6 404 aa11.96□□□□□ -0.49
PHACTR4-202ENST00000373839 PIH1D3Q9NQM4 214 aaKnown RBP11.96□□□□□ -0.49
PHACTR4-202ENST00000373839 A2ML1A8K2U0 1454 aa11.96□□□□□ -0.49
PHACTR4-202ENST00000373839 ASB14A6NK59 587 aa11.96□□□□□ -0.49
PHACTR4-202ENST00000373839 ATP8B1O43520 1251 aa11.96□□□□□ -0.49
PHACTR4-202ENST00000373839 TFDP2Q14188 446 aa11.96□□□□□ -0.49
PHACTR4-202ENST00000373839 KRT39Q6A163 491 aa11.96□□□□□ -0.49
PHACTR4-202ENST00000373839 TRMT2AQ8IZ69 625 aaKnown RBP11.96□□□□□ -0.49
PHACTR4-202ENST00000373839 PROM2Q8N271 834 aa11.96□□□□□ -0.49
PHACTR4-202ENST00000373839 STRIP2Q9ULQ0 834 aa11.96□□□□□ -0.49
PHACTR4-202ENST00000373839 UTYO14607 1347 aa11.96□□□□□ -0.49
PHACTR4-202ENST00000373839 SUN1O94901 812 aa11.96□□□□□ -0.49
PHACTR4-202ENST00000373839 CHEK2O96017 543 aa11.96□□□□□ -0.49
PHACTR4-202ENST00000373839 PLCG1P19174 1290 aa11.96□□□□□ -0.49
PHACTR4-202ENST00000373839 GNGT1P63211 74 aa11.96□□□□□ -0.49
PHACTR4-202ENST00000373839 CUL4AQ13619 759 aa11.96□□□□□ -0.49
PHACTR4-202ENST00000373839 TOGARAM2Q6ZUX3 1019 aa11.96□□□□□ -0.49
PHACTR4-202ENST00000373839 EEPD1Q7L9B9 569 aa11.96□□□□□ -0.49
PHACTR4-202ENST00000373839 ERICH1Q86X53 443 aa11.96□□□□□ -0.49
PHACTR4-202ENST00000373839 TTC13Q8NBP0 860 aa11.96□□□□□ -0.49
PHACTR4-202ENST00000373839 NLRP4Q96MN2 994 aa11.96□□□□□ -0.49
PHACTR4-202ENST00000373839 WRNIP1Q96S55 665 aa11.96□□□□□ -0.49
PHACTR4-202ENST00000373839 PCIF1Q9H4Z3 704 aa11.96□□□□□ -0.49
PHACTR4-202ENST00000373839 SEL1LQ9UBV2 794 aa11.96□□□□□ -0.49
PHACTR4-202ENST00000373839 ADCK5Q3MIX3 580 aa11.96□□□□□ -0.5
PHACTR4-202ENST00000373839 GBP7Q8N8V2 638 aaPredicted RBP11.96□□□□□ -0.5
PHACTR4-202ENST00000373839 PSPC1Q8WXF1 523 aaKnown RBP11.96□□□□□ -0.5
PHACTR4-202ENST00000373839 TUBB6Q9BUF5 446 aa11.96□□□□□ -0.5
PHACTR4-202ENST00000373839 MAP3K4Q9Y6R4 1608 aa11.96□□□□□ -0.5
PHACTR4-202ENST00000373839 PAMP19021 973 aa11.96□□□□□ -0.5
PHACTR4-202ENST00000373839 GUCY2DQ02846 1103 aa11.96□□□□□ -0.5
PHACTR4-202ENST00000373839 NFX1Q12986 1120 aaKnown RBP11.96□□□□□ -0.5
PHACTR4-202ENST00000373839 KLC3Q6P597 504 aa11.96□□□□□ -0.5
PHACTR4-202ENST00000373839 TMEM35BQ8NCS4 154 aa11.96□□□□□ -0.5
PHACTR4-202ENST00000373839 CLIC2O15247 247 aa11.95□□□□□ -0.5
PHACTR4-202ENST00000373839 HUS1O60921 280 aa11.95□□□□□ -0.5
PHACTR4-202ENST00000373839 CDC42EP1Q00587 391 aa11.95□□□□□ -0.5
PHACTR4-202ENST00000373839 UNC13DQ70J99 1090 aa11.95□□□□□ -0.5
PHACTR4-202ENST00000373839 CALN1Q9BXU9 219 aa11.95□□□□□ -0.5
PHACTR4-202ENST00000373839 EPS15L1Q9UBC2 864 aa11.95□□□□□ -0.5
PHACTR4-202ENST00000373839 PRR36Q9H6K5 1346 aa11.95□□□□□ -0.5
PHACTR4-202ENST00000373839 AP3M2P53677 418 aa11.95□□□□□ -0.5
PHACTR4-202ENST00000373839 LRRC31Q6UY01 552 aa11.95□□□□□ -0.5
PHACTR4-202ENST00000373839 OR6B3Q8NGW1 331 aa11.95□□□□□ -0.5
PHACTR4-202ENST00000373839 GTF3C2Q8WUA4 911 aaPredicted RBP11.95□□□□□ -0.5
PHACTR4-202ENST00000373839 CHMP6Q96FZ7 201 aa11.95□□□□□ -0.5
PHACTR4-202ENST00000373839 FAM49AQ9H0Q0 323 aaPredicted RBP11.95□□□□□ -0.5
PHACTR4-202ENST00000373839 PCDHA6Q9UN73 950 aa11.95□□□□□ -0.5
PHACTR4-202ENST00000373839 PCDHA8Q9Y5H6 950 aa11.95□□□□□ -0.5
PHACTR4-202ENST00000373839 ZHX2Q9Y6X8 837 aa11.95□□□□□ -0.5
PHACTR4-202ENST00000373839 LRRD1A4D1F6 860 aa11.95□□□□□ -0.5
PHACTR4-202ENST00000373839 CLDN3O15551 220 aa11.95□□□□□ -0.5
PHACTR4-202ENST00000373839 ZBED1O96006 694 aa11.95□□□□□ -0.5
PHACTR4-202ENST00000373839 SRGAP2CP0DJJ0 459 aa11.95□□□□□ -0.5
PHACTR4-202ENST00000373839 CCDC124Q96CT7 223 aaKnown RBP11.95□□□□□ -0.5
PHACTR4-202ENST00000373839 BHMT2Q9H2M3 363 aa11.95□□□□□ -0.5
PHACTR4-202ENST00000373839 MROH7-TTC4A0A0A0MT08 1334 aa11.95□□□□□ -0.5
PHACTR4-202ENST00000373839 DPYSL4O14531 572 aa11.95□□□□□ -0.5
PHACTR4-202ENST00000373839 CA4P22748 312 aa11.95□□□□□ -0.5
PHACTR4-202ENST00000373839 LRRC41Q15345 812 aa11.95□□□□□ -0.5
PHACTR4-202ENST00000373839 SP8Q8IXZ3 490 aa11.95□□□□□ -0.5
PHACTR4-202ENST00000373839 PGBD1Q96JS3 809 aa11.95□□□□□ -0.5
PHACTR4-202ENST00000373839 EFHD1Q9BUP0 239 aa11.95□□□□□ -0.5
PHACTR4-202ENST00000373839 FTOQ9C0B1 505 aaKnown RBP eCLIP11.95□□□□□ -0.5
PHACTR4-202ENST00000373839 ACAD9Q9H845 621 aa11.95□□□□□ -0.5
PHACTR4-202ENST00000373839 MIF4GDA9UHW6 222 aaKnown RBP11.94□□□□□ -0.5
PHACTR4-202ENST00000373839 HGSO14964 777 aaPredicted RBP11.94□□□□□ -0.5
PHACTR4-202ENST00000373839 LRRN2O75325 713 aa11.94□□□□□ -0.5
PHACTR4-202ENST00000373839 NNMTP40261 264 aa11.94□□□□□ -0.5
PHACTR4-202ENST00000373839 PAPOLAP51003 745 aaKnown RBP11.94□□□□□ -0.5
PHACTR4-202ENST00000373839 SNRNP48Q6IEG0 339 aaKnown RBP11.94□□□□□ -0.5
PHACTR4-202ENST00000373839 PDIK1LQ8N165 341 aa11.94□□□□□ -0.5
PHACTR4-202ENST00000373839 MCUQ8NE86 351 aa11.94□□□□□ -0.5
PHACTR4-202ENST00000373839 GDAP1Q8TB36 358 aa11.94□□□□□ -0.5
PHACTR4-202ENST00000373839 PPP2R3CQ969Q6 453 aa11.94□□□□□ -0.5
PHACTR4-202ENST00000373839 RBM41Q96IZ5 413 aaKnown RBP11.94□□□□□ -0.5
PHACTR4-202ENST00000373839 NDST4Q9H3R1 872 aa11.94□□□□□ -0.5
PHACTR4-202ENST00000373839 RNF146Q9NTX7 359 aa11.94□□□□□ -0.5
PHACTR4-202ENST00000373839 SHROOM2Q13796 1616 aa11.94□□□□□ -0.5
PHACTR4-202ENST00000373839 TNS3Q68CZ2 1445 aa11.94□□□□□ -0.5
PHACTR4-202ENST00000373839 SPDYE2BA6NHP3 402 aa11.94□□□□□ -0.5
PHACTR4-202ENST00000373839 MEIS1O00470 390 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms