RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 FRMPD4Q14CM0 1322 aa9.63□□□□□ -0.87
SNRNP40-202ENST00000373720 IGLV3-22A0A075B6J6 115 aa9.63□□□□□ -0.87
SNRNP40-202ENST00000373720 A0A1W2PRG0 241 aa9.63□□□□□ -0.87
SNRNP40-202ENST00000373720 TTC26A0AVF1 554 aa9.63□□□□□ -0.87
SNRNP40-202ENST00000373720 USP27XA6NNY8 438 aa9.63□□□□□ -0.87
SNRNP40-202ENST00000373720 FZD9O00144 591 aa9.63□□□□□ -0.87
SNRNP40-202ENST00000373720 MAPK13O15264 365 aa9.63□□□□□ -0.87
SNRNP40-202ENST00000373720 RAD21O60216 631 aa9.63□□□□□ -0.87
SNRNP40-202ENST00000373720 PSMD10O75832 226 aa9.63□□□□□ -0.87
SNRNP40-202ENST00000373720 RAD17O75943 681 aa9.63□□□□□ -0.87
SNRNP40-202ENST00000373720 GUCY2CP25092 1073 aa9.63□□□□□ -0.87
SNRNP40-202ENST00000373720 CASP1P29466 404 aa9.63□□□□□ -0.87
SNRNP40-202ENST00000373720 FXR1P51114 621 aaKnown RBP eCLIP9.63□□□□□ -0.87
SNRNP40-202ENST00000373720 PRELPP51888 382 aa9.63□□□□□ -0.87
SNRNP40-202ENST00000373720 CACNB3P54284 484 aa9.63□□□□□ -0.87
SNRNP40-202ENST00000373720 KIF5AQ12840 1032 aa9.63□□□□□ -0.87
SNRNP40-202ENST00000373720 KNOP1Q1ED39 458 aaKnown RBP9.63□□□□□ -0.87
SNRNP40-202ENST00000373720 SUPT20HL1Q3ZLR7 823 aa9.63□□□□□ -0.87
SNRNP40-202ENST00000373720 PCNX4Q63HM2 1172 aa9.63□□□□□ -0.87
SNRNP40-202ENST00000373720 SLC51AQ86UW1 340 aa9.63□□□□□ -0.87
SNRNP40-202ENST00000373720 GPBP1Q86WP2 473 aa9.63□□□□□ -0.87
SNRNP40-202ENST00000373720 NEK11Q8NG66 645 aa9.63□□□□□ -0.87
SNRNP40-202ENST00000373720 RABGGTAQ92696 567 aa9.63□□□□□ -0.87
SNRNP40-202ENST00000373720 MS4A4AQ96JQ5 239 aa9.63□□□□□ -0.87
SNRNP40-202ENST00000373720 MXRA8Q9BRK3 442 aa9.63□□□□□ -0.87
SNRNP40-202ENST00000373720 CCDC94Q9BW85 323 aaPredicted RBP9.63□□□□□ -0.87
SNRNP40-202ENST00000373720 TEKT3Q9BXF9 490 aa9.63□□□□□ -0.87
SNRNP40-202ENST00000373720 GBP3Q9H0R5 595 aa9.63□□□□□ -0.87
SNRNP40-202ENST00000373720 TMEM206Q9H813 350 aa9.63□□□□□ -0.87
SNRNP40-202ENST00000373720 SLC39A2Q9NP94 309 aa9.63□□□□□ -0.87
SNRNP40-202ENST00000373720 TYW1Q9NV66 732 aaKnown RBP9.63□□□□□ -0.87
SNRNP40-202ENST00000373720 CEP72Q9P209 647 aa9.63□□□□□ -0.87
SNRNP40-202ENST00000373720 ZNF112Q9UJU3 913 aa9.63□□□□□ -0.87
SNRNP40-202ENST00000373720 CDC23Q9UJX2 597 aa9.63□□□□□ -0.87
SNRNP40-202ENST00000373720 VAV3Q9UKW4 847 aa9.63□□□□□ -0.87
SNRNP40-202ENST00000373720 CTDP1Q9Y5B0 961 aaPredicted RBP9.63□□□□□ -0.87
SNRNP40-202ENST00000373720 PCDHA2Q9Y5H9 948 aa9.63□□□□□ -0.87
SNRNP40-202ENST00000373720 RPTORQ8N122 1335 aa9.62□□□□□ -0.87
SNRNP40-202ENST00000373720 SHTN1A0MZ66 631 aa9.62□□□□□ -0.87
SNRNP40-202ENST00000373720 PHF20L1A8MW92 1017 aa9.62□□□□□ -0.87
SNRNP40-202ENST00000373720 B4DLN1 442 aa9.62□□□□□ -0.87
SNRNP40-202ENST00000373720 H0YCG3 227 aa9.62□□□□□ -0.87
SNRNP40-202ENST00000373720 TRAF5O00463 557 aa9.62□□□□□ -0.87
SNRNP40-202ENST00000373720 MSH4O15457 936 aa9.62□□□□□ -0.87
SNRNP40-202ENST00000373720 GAS7O60861 476 aa9.62□□□□□ -0.87
SNRNP40-202ENST00000373720 URI1O94763 535 aaPredicted RBP9.62□□□□□ -0.87
SNRNP40-202ENST00000373720 P4HBP07237 508 aaKnown RBP9.62□□□□□ -0.87
SNRNP40-202ENST00000373720 SPATA31C1P0DKV0 1188 aa9.62□□□□□ -0.87
SNRNP40-202ENST00000373720 EPS15P42566 896 aa9.62□□□□□ -0.87
SNRNP40-202ENST00000373720 JAK3P52333 1124 aa9.62□□□□□ -0.87
SNRNP40-202ENST00000373720 ZNF131P52739 623 aa9.62□□□□□ -0.87
SNRNP40-202ENST00000373720 MCCD1P59942 119 aaPredicted RBP9.62□□□□□ -0.87
SNRNP40-202ENST00000373720 ITIH3Q06033 890 aa9.62□□□□□ -0.87
SNRNP40-202ENST00000373720 CKAP4Q07065 602 aaKnown RBP9.62□□□□□ -0.87
SNRNP40-202ENST00000373720 GIT2Q14161 759 aa9.62□□□□□ -0.87
SNRNP40-202ENST00000373720 PPP2R5AQ15172 486 aa9.62□□□□□ -0.87
SNRNP40-202ENST00000373720 IFI16Q16666 785 aaKnown RBP9.62□□□□□ -0.87
SNRNP40-202ENST00000373720 SLC9C1Q4G0N8 1177 aa9.62□□□□□ -0.87
SNRNP40-202ENST00000373720 MIIPQ5JXC2 388 aa9.62□□□□□ -0.87
SNRNP40-202ENST00000373720 LRCH2Q5VUJ6 765 aa9.62□□□□□ -0.87
SNRNP40-202ENST00000373720 B3GNT9Q6UX72 402 aa9.62□□□□□ -0.87
SNRNP40-202ENST00000373720 LRRC55Q6ZSA7 311 aa9.62□□□□□ -0.87
SNRNP40-202ENST00000373720 EPM2AIP1Q7L775 607 aaPredicted RBP9.62□□□□□ -0.87
SNRNP40-202ENST00000373720 HS2ST1Q7LGA3 356 aa9.62□□□□□ -0.87
SNRNP40-202ENST00000373720 LDHDQ86WU2 507 aa9.62□□□□□ -0.87
SNRNP40-202ENST00000373720 SLC9A9Q8IVB4 645 aa9.62□□□□□ -0.87
SNRNP40-202ENST00000373720 TRIM59Q8IWR1 403 aa9.62□□□□□ -0.87
SNRNP40-202ENST00000373720 TRIM58Q8NG06 486 aa9.62□□□□□ -0.87
SNRNP40-202ENST00000373720 GOLGA1Q92805 767 aa9.62□□□□□ -0.87
SNRNP40-202ENST00000373720 KCNN1Q92952 543 aa9.62□□□□□ -0.87
SNRNP40-202ENST00000373720 HVCN1Q96D96 273 aa9.62□□□□□ -0.87
SNRNP40-202ENST00000373720 FAM81BQ96LP2 452 aa9.62□□□□□ -0.87
SNRNP40-202ENST00000373720 PCMTD1Q96MG8 357 aaPredicted RBP9.62□□□□□ -0.87
SNRNP40-202ENST00000373720 NAPGQ99747 312 aaPredicted RBP9.62□□□□□ -0.87
SNRNP40-202ENST00000373720 EIF2AK1Q9BQI3 630 aaKnown RBP9.62□□□□□ -0.87
SNRNP40-202ENST00000373720 ST6GALNAC4Q9H4F1 302 aa9.62□□□□□ -0.87
SNRNP40-202ENST00000373720 ZSWIM4Q9H7M6 989 aa9.62□□□□□ -0.87
SNRNP40-202ENST00000373720 VEZTQ9HBM0 779 aa9.62□□□□□ -0.87
SNRNP40-202ENST00000373720 SLC38A10Q9HBR0 1119 aa9.62□□□□□ -0.87
SNRNP40-202ENST00000373720 ZNF277Q9NRM2 450 aaPredicted RBP9.62□□□□□ -0.87
SNRNP40-202ENST00000373720 LARSQ9P2J5 1176 aaKnown RBP9.62□□□□□ -0.87
SNRNP40-202ENST00000373720 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.62□□□□□ -0.87
SNRNP40-202ENST00000373720 MRFAP1Q9Y605 127 aa9.62□□□□□ -0.87
SNRNP40-202ENST00000373720 LOC102724159A0A0B4J2E5 919 aa9.61□□□□□ -0.87
SNRNP40-202ENST00000373720 FAM86B1E9PN63 330 aa9.61□□□□□ -0.87
SNRNP40-202ENST00000373720 PES1O00541 588 aaKnown RBP9.61□□□□□ -0.87
SNRNP40-202ENST00000373720 PMM2O15305 246 aa9.61□□□□□ -0.87
SNRNP40-202ENST00000373720 P4HA2O15460 535 aa9.61□□□□□ -0.87
SNRNP40-202ENST00000373720 CFBP00751 764 aa9.61□□□□□ -0.87
SNRNP40-202ENST00000373720 FAM86B2P0C5J1 330 aa9.61□□□□□ -0.87
SNRNP40-202ENST00000373720 FCER1AP12319 257 aa9.61□□□□□ -0.87
SNRNP40-202ENST00000373720 COPB2P35606 906 aa9.61□□□□□ -0.87
SNRNP40-202ENST00000373720 KRT76Q01546 638 aa9.61□□□□□ -0.87
SNRNP40-202ENST00000373720 NCBP1Q09161 790 aaKnown RBP9.61□□□□□ -0.87
SNRNP40-202ENST00000373720 CETN1Q12798 172 aa9.61□□□□□ -0.87
SNRNP40-202ENST00000373720 ADAM9Q13443 819 aa9.61□□□□□ -0.87
SNRNP40-202ENST00000373720 BMS1Q14692 1282 aaKnown RBP9.61□□□□□ -0.87
SNRNP40-202ENST00000373720 PWP2Q15269 919 aaKnown RBP9.61□□□□□ -0.87
SNRNP40-202ENST00000373720 CCDC40Q4G0X9 1142 aa9.61□□□□□ -0.87
SNRNP40-202ENST00000373720 NOL9Q5SY16 702 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms