RNA–Protein interactions for RNA: ENST00000372056.8

LDB3-203, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-203ENST00000372056 TEX33O43247 280 aa14.42□□□□□ -0.1
LDB3-203ENST00000372056 NRDCO43847 1150 aa14.42□□□□□ -0.1
LDB3-203ENST00000372056 MED24O75448 989 aa14.42□□□□□ -0.1
LDB3-203ENST00000372056 PSMD10O75832 226 aa14.42□□□□□ -0.1
LDB3-203ENST00000372056 CCNE1P24864 410 aa14.42□□□□□ -0.1
LDB3-203ENST00000372056 RPA1P27694 616 aa14.42□□□□□ -0.1
LDB3-203ENST00000372056 TM4SF4P48230 202 aa14.42□□□□□ -0.1
LDB3-203ENST00000372056 EHHADHQ08426 723 aa14.42□□□□□ -0.1
LDB3-203ENST00000372056 KCNJ12Q14500 433 aa14.42□□□□□ -0.1
LDB3-203ENST00000372056 DYMQ7RTS9 669 aa14.42□□□□□ -0.1
LDB3-203ENST00000372056 ANKRD20A12PQ8NF67 263 aa14.42□□□□□ -0.1
LDB3-203ENST00000372056 P2RX5Q93086 422 aa14.42□□□□□ -0.1
LDB3-203ENST00000372056 TRIM47Q96LD4 638 aa14.42□□□□□ -0.1
LDB3-203ENST00000372056 INPP4AQ96PE3 977 aaPredicted RBP14.42□□□□□ -0.1
LDB3-203ENST00000372056 THAP9Q9H5L6 903 aa14.42□□□□□ -0.1
LDB3-203ENST00000372056 BMP2KQ9NSY1 1161 aaPredicted RBP14.42□□□□□ -0.1
LDB3-203ENST00000372056 ABT1Q9ULW3 272 aaKnown RBP14.42□□□□□ -0.1
LDB3-203ENST00000372056 BICDL2A1A5D9 508 aa14.42□□□□□ -0.1
LDB3-203ENST00000372056 EIF2AK2P19525 551 aaKnown RBP14.42□□□□□ -0.1
LDB3-203ENST00000372056 ICAM3P32942 547 aa14.42□□□□□ -0.1
LDB3-203ENST00000372056 TERF1P54274 439 aa14.42□□□□□ -0.1
LDB3-203ENST00000372056 KRT76Q01546 638 aa14.42□□□□□ -0.1
LDB3-203ENST00000372056 NOGQ13253 232 aa14.42□□□□□ -0.1
LDB3-203ENST00000372056 IRF5Q13568 498 aa14.42□□□□□ -0.1
LDB3-203ENST00000372056 HSP90AA2PQ14568 343 aaPredicted RBP14.42□□□□□ -0.1
LDB3-203ENST00000372056 OTOP1Q7RTM1 612 aa14.42□□□□□ -0.1
LDB3-203ENST00000372056 ZNF467Q7Z7K2 595 aaPredicted RBP14.42□□□□□ -0.1
LDB3-203ENST00000372056 MSL3Q8N5Y2 521 aaKnown RBP14.42□□□□□ -0.1
LDB3-203ENST00000372056 FAM133AQ8N9E0 248 aa14.42□□□□□ -0.1
LDB3-203ENST00000372056 NOC3LQ8WTT2 800 aaKnown RBP14.42□□□□□ -0.1
LDB3-203ENST00000372056 HPS3Q969F9 1004 aa14.42□□□□□ -0.1
LDB3-203ENST00000372056 DNAJC19Q96DA6 116 aa14.42□□□□□ -0.1
LDB3-203ENST00000372056 DUSP9Q99956 384 aaKnown RBP14.42□□□□□ -0.1
LDB3-203ENST00000372056 SENP7Q9BQF6 1050 aa14.42□□□□□ -0.1
LDB3-203ENST00000372056 ZFYVE28Q9HCC9 887 aa14.42□□□□□ -0.1
LDB3-203ENST00000372056 KCNH7Q9NS40 1196 aa14.42□□□□□ -0.1
LDB3-203ENST00000372056 NFASCO94856 1347 aa14.42□□□□□ -0.1
LDB3-203ENST00000372056 DNAJC25-GNG10A0A024R161 153 aa14.41□□□□□ -0.1
LDB3-203ENST00000372056 POTEFA5A3E0 1075 aa14.41□□□□□ -0.1
LDB3-203ENST00000372056 USP27XA6NNY8 438 aa14.41□□□□□ -0.1
LDB3-203ENST00000372056 E9PMD0 336 aa14.41□□□□□ -0.1
LDB3-203ENST00000372056 PLA2G4BP0C869 781 aa14.41□□□□□ -0.1
LDB3-203ENST00000372056 MYCLP12524 364 aaPredicted RBP14.41□□□□□ -0.1
LDB3-203ENST00000372056 EEF1GP26641 437 aaKnown RBP14.41□□□□□ -0.1
LDB3-203ENST00000372056 JAK3P52333 1124 aa14.41□□□□□ -0.1
LDB3-203ENST00000372056 COPB1P53618 953 aaKnown RBP14.41□□□□□ -0.1
LDB3-203ENST00000372056 EPHA7Q15375 998 aa14.41□□□□□ -0.1
LDB3-203ENST00000372056 NCAPH2Q6IBW4 605 aa14.41□□□□□ -0.1
LDB3-203ENST00000372056 POTEGQ6S5H5 508 aa14.41□□□□□ -0.1
LDB3-203ENST00000372056 POTEEQ6S8J3 1075 aa14.41□□□□□ -0.1
LDB3-203ENST00000372056 CATSPER3Q86XQ3 398 aa14.41□□□□□ -0.1
LDB3-203ENST00000372056 CCAR2Q8N163 923 aaKnown RBP14.41□□□□□ -0.1
LDB3-203ENST00000372056 SLC39A2Q9NP94 309 aa14.41□□□□□ -0.1
LDB3-203ENST00000372056 N4BP3O15049 544 aa14.4□□□□□ -0.1
LDB3-203ENST00000372056 SPATA31C1P0DKV0 1188 aa14.4□□□□□ -0.1
LDB3-203ENST00000372056 IDEP14735 1019 aa14.4□□□□□ -0.1
LDB3-203ENST00000372056 ITGB5P18084 799 aa14.4□□□□□ -0.1
LDB3-203ENST00000372056 EDNRBP24530 442 aa14.4□□□□□ -0.1
LDB3-203ENST00000372056 ALDH5A1P51649 535 aaPredicted RBP14.4□□□□□ -0.1
LDB3-203ENST00000372056 MRPS9P82933 396 aaKnown RBP14.4□□□□□ -0.1
LDB3-203ENST00000372056 GOLGA8FQ08AF8 430 aa14.4□□□□□ -0.1
LDB3-203ENST00000372056 GOLGA8DPQ0D2H9 430 aa14.4□□□□□ -0.1
LDB3-203ENST00000372056 PSMD2Q13200 908 aa14.4□□□□□ -0.1
LDB3-203ENST00000372056 E4F1Q66K89 784 aaPredicted RBP14.4□□□□□ -0.1
LDB3-203ENST00000372056 IFNL1Q8IU54 200 aa14.4□□□□□ -0.1
LDB3-203ENST00000372056 SMAP1Q8IYB5 467 aaPredicted RBP14.4□□□□□ -0.1
LDB3-203ENST00000372056 GUF1Q8N442 669 aaKnown RBP14.4□□□□□ -0.1
LDB3-203ENST00000372056 CSGALNACT2Q8N6G5 542 aa14.4□□□□□ -0.1
LDB3-203ENST00000372056 TC2NQ8N9U0 490 aa14.4□□□□□ -0.1
LDB3-203ENST00000372056 AGO4Q9HCK5 861 aaKnown RBP14.4□□□□□ -0.1
LDB3-203ENST00000372056 TXNRD2Q9NNW7 524 aa14.4□□□□□ -0.1
LDB3-203ENST00000372056 CREBZFQ9NS37 354 aa14.4□□□□□ -0.1
LDB3-203ENST00000372056 TAB2Q9NYJ8 693 aa14.4□□□□□ -0.1
LDB3-203ENST00000372056 DNM3Q9UQ16 869 aa14.4□□□□□ -0.1
LDB3-203ENST00000372056 SSBP05455 408 aaKnown RBP eCLIP14.4□□□□□ -0.1
LDB3-203ENST00000372056 CYP2C8P10632 490 aa14.4□□□□□ -0.1
LDB3-203ENST00000372056 UBXN2AP68543 259 aa14.4□□□□□ -0.1
LDB3-203ENST00000372056 TAF1CQ15572 869 aaPredicted RBP14.4□□□□□ -0.1
LDB3-203ENST00000372056 Q3C1V9 767 aa14.4□□□□□ -0.1
LDB3-203ENST00000372056 ANKRD40Q6AI12 368 aa14.4□□□□□ -0.1
LDB3-203ENST00000372056 CENPPQ6IPU0 288 aa14.4□□□□□ -0.1
LDB3-203ENST00000372056 ZNF746Q6NUN9 644 aaPredicted RBP14.4□□□□□ -0.1
LDB3-203ENST00000372056 TMEM139Q8IV31 216 aa14.4□□□□□ -0.1
LDB3-203ENST00000372056 MORC4Q8TE76 937 aa14.4□□□□□ -0.1
LDB3-203ENST00000372056 C16orf45Q96MC5 204 aaPredicted RBP14.4□□□□□ -0.1
LDB3-203ENST00000372056 SRRTQ9BXP5 876 aaKnown RBP14.4□□□□□ -0.1
LDB3-203ENST00000372056 ITIH6Q6UXX5 1313 aa14.4□□□□□ -0.1
LDB3-203ENST00000372056 SLC15A5A6NIM6 579 aa14.39□□□□□ -0.11
LDB3-203ENST00000372056 SPATA31C2B4DYI2 1134 aa14.39□□□□□ -0.11
LDB3-203ENST00000372056 SLC12A3P55017 1021 aa14.39□□□□□ -0.11
LDB3-203ENST00000372056 COASYQ13057 564 aa14.39□□□□□ -0.11
LDB3-203ENST00000372056 GPBP1Q86WP2 473 aa14.39□□□□□ -0.11
LDB3-203ENST00000372056 ANKRD13CQ8N6S4 541 aa14.39□□□□□ -0.11
LDB3-203ENST00000372056 PTPN18Q99952 460 aa14.39□□□□□ -0.11
LDB3-203ENST00000372056 VPS16Q9H269 839 aa14.39□□□□□ -0.11
LDB3-203ENST00000372056 SEMA6BQ9H3T3 888 aa14.39□□□□□ -0.11
LDB3-203ENST00000372056 KCND2Q9NZV8 630 aa14.39□□□□□ -0.11
LDB3-203ENST00000372056 TLR2O60603 784 aa14.38□□□□□ -0.11
LDB3-203ENST00000372056 CYP11B2P19099 503 aa14.38□□□□□ -0.11
LDB3-203ENST00000372056 ADKP55263 362 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms