RNA–Protein interactions for RNA: ENST00000371601.4

NPDC1-202, Transcript of neural proliferation, differentiation and control 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NPDC1, Length 1,494 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPDC1-202ENST00000371601 PCDHA10Q9Y5I2 948 aa23.22■■□□□ 1.31
NPDC1-202ENST00000371601 NRCAMQ92823 1304 aa23.22■■□□□ 1.31
NPDC1-202ENST00000371601 PITPNM1O00562 1244 aa23.21■■□□□ 1.31
NPDC1-202ENST00000371601 CHMP2AO43633 222 aa23.21■■□□□ 1.31
NPDC1-202ENST00000371601 PSAPP07602 524 aa23.21■■□□□ 1.31
NPDC1-202ENST00000371601 IQCF3P0C7M6 154 aa23.21■■□□□ 1.31
NPDC1-202ENST00000371601 PPP4R3AQ6IN85 833 aa23.21■■□□□ 1.31
NPDC1-202ENST00000371601 C16orf59Q7L2K0 433 aa23.21■■□□□ 1.31
NPDC1-202ENST00000371601 CKAP2LQ8IYA6 745 aa23.21■■□□□ 1.31
NPDC1-202ENST00000371601 FBXO18Q8NFZ0 1043 aa23.21■■□□□ 1.31
NPDC1-202ENST00000371601 SLC5A5Q92911 643 aa23.21■■□□□ 1.31
NPDC1-202ENST00000371601 NAP1L4Q99733 375 aaKnown RBP23.21■■□□□ 1.31
NPDC1-202ENST00000371601 IL23AQ9NPF7 189 aa23.21■■□□□ 1.31
NPDC1-202ENST00000371601 SLC37A4O43826 429 aa23.2■■□□□ 1.3
NPDC1-202ENST00000371601 CKBP12277 381 aa23.2■■□□□ 1.3
NPDC1-202ENST00000371601 GCFC2P16383 781 aaKnown RBP23.2■■□□□ 1.3
NPDC1-202ENST00000371601 ATP2B1P20020 1258 aa23.2■■□□□ 1.3
NPDC1-202ENST00000371601 ZNF365Q70YC5 407 aa23.2■■□□□ 1.3
NPDC1-202ENST00000371601 SMAP1Q8IYB5 467 aaPredicted RBP23.2■■□□□ 1.3
NPDC1-202ENST00000371601 DHX38Q92620 1227 aaKnown RBP23.2■■□□□ 1.3
NPDC1-202ENST00000371601 TNFRSF25Q93038 417 aa23.2■■□□□ 1.3
NPDC1-202ENST00000371601 RNPC3Q96LT9 517 aaKnown RBP23.2■■□□□ 1.3
NPDC1-202ENST00000371601 MBOAT7Q96N66 472 aa23.2■■□□□ 1.3
NPDC1-202ENST00000371601 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.2■■□□□ 1.35e-7■■■■□ 25.4
NPDC1-202ENST00000371601 FTOQ9C0B1 505 aaKnown RBP eCLIP23.2■■□□□ 1.3
NPDC1-202ENST00000371601 KIF3AQ9Y496 699 aa23.2■■□□□ 1.3
NPDC1-202ENST00000371601 EMSYQ7Z589 1322 aa23.2■■□□□ 1.3
NPDC1-202ENST00000371601 DOCK5Q9H7D0 1870 aa23.19■■□□□ 1.3
NPDC1-202ENST00000371601 POTEB3A0JP26 581 aa23.19■■□□□ 1.3
NPDC1-202ENST00000371601 FGBP02675 491 aa23.19■■□□□ 1.3
NPDC1-202ENST00000371601 INSRRP14616 1297 aa23.19■■□□□ 1.3
NPDC1-202ENST00000371601 THPOP40225 353 aa23.19■■□□□ 1.3
NPDC1-202ENST00000371601 PLCB4Q15147 1175 aa23.19■■□□□ 1.3
NPDC1-202ENST00000371601 POTEBQ6S5H4 581 aa23.19■■□□□ 1.3
NPDC1-202ENST00000371601 SERINC5Q86VE9 423 aa23.19■■□□□ 1.3
NPDC1-202ENST00000371601 LMBR1Q8WVP7 490 aa23.19■■□□□ 1.3
NPDC1-202ENST00000371601 DISC1Q9NRI5 854 aa23.19■■□□□ 1.3
NPDC1-202ENST00000371601 GABBR1Q9UBS5 961 aa23.19■■□□□ 1.3
NPDC1-202ENST00000371601 IGKV6D-21A0A0A0MT36 114 aa23.18■■□□□ 1.3
NPDC1-202ENST00000371601 WDR64B1ANS9 1081 aa23.18■■□□□ 1.3
NPDC1-202ENST00000371601 SELPP16109 830 aa23.18■■□□□ 1.3
NPDC1-202ENST00000371601 SLC26A2P50443 739 aa23.18■■□□□ 1.3
NPDC1-202ENST00000371601 GRIK4Q16099 956 aa23.18■■□□□ 1.3
NPDC1-202ENST00000371601 TMEM240Q5SV17 173 aa23.18■■□□□ 1.3
NPDC1-202ENST00000371601 CCDC60Q8IWA6 550 aaPredicted RBP23.18■■□□□ 1.3
NPDC1-202ENST00000371601 AFAP1L1Q8TED9 768 aa23.18■■□□□ 1.3
NPDC1-202ENST00000371601 UNC45AQ9H3U1 944 aa23.18■■□□□ 1.3
NPDC1-202ENST00000371601 SMC3Q9UQE7 1217 aa23.18■■□□□ 1.3
NPDC1-202ENST00000371601 LAMA2P24043 3122 aaKnown RBP23.18■■□□□ 1.3
NPDC1-202ENST00000371601 PSMD10O75832 226 aa23.17■■□□□ 1.3
NPDC1-202ENST00000371601 BAG4O95429 457 aaKnown RBP23.17■■□□□ 1.3
NPDC1-202ENST00000371601 FXR1P51114 621 aaKnown RBP eCLIP23.17■■□□□ 1.3
NPDC1-202ENST00000371601 ZNF618Q5T7W0 954 aa23.17■■□□□ 1.3
NPDC1-202ENST00000371601 LRRC8DQ7L1W4 858 aa23.17■■□□□ 1.3
NPDC1-202ENST00000371601 OTOP2Q7RTS6 562 aa23.17■■□□□ 1.3
NPDC1-202ENST00000371601 ETNPPLQ8TBG4 499 aa23.17■■□□□ 1.3
NPDC1-202ENST00000371601 WNT8BQ93098 351 aa23.17■■□□□ 1.3
NPDC1-202ENST00000371601 FAM20AQ96MK3 541 aa23.17■■□□□ 1.3
NPDC1-202ENST00000371601 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.17■■□□□ 1.3
NPDC1-202ENST00000371601 RRN3P2A6NIE6 340 aa23.17■■□□□ 1.3
NPDC1-202ENST00000371601 GJB2P29033 226 aa23.17■■□□□ 1.3
NPDC1-202ENST00000371601 HOXC8P31273 242 aa23.17■■□□□ 1.3
NPDC1-202ENST00000371601 LRIT3Q3SXY7 679 aa23.17■■□□□ 1.3
NPDC1-202ENST00000371601 PSRC1Q6PGN9 363 aaPredicted RBP23.17■■□□□ 1.3
NPDC1-202ENST00000371601 MIER3Q7Z3K6 550 aa23.17■■□□□ 1.3
NPDC1-202ENST00000371601 FOXP1Q9H334 677 aaPredicted RBP23.17■■□□□ 1.3
NPDC1-202ENST00000371601 SFNP31947 248 aa23.16■■□□□ 1.3
NPDC1-202ENST00000371601 RFC2P35250 354 aa23.16■■□□□ 1.3
NPDC1-202ENST00000371601 JAK3P52333 1124 aa23.16■■□□□ 1.3
NPDC1-202ENST00000371601 TUBE1Q9UJT0 475 aa23.16■■□□□ 1.3
NPDC1-202ENST00000371601 MAFBQ9Y5Q3 323 aaPredicted RBP23.16■■□□□ 1.3
NPDC1-202ENST00000371601 RSPH10B2B2RC85 870 aa23.15■■□□□ 1.3
NPDC1-202ENST00000371601 SOX1O00570 391 aaPredicted RBP23.15■■□□□ 1.3
NPDC1-202ENST00000371601 HBP1O60381 514 aa23.15■■□□□ 1.3
NPDC1-202ENST00000371601 RSPH10BP0C881 870 aa23.15■■□□□ 1.3
NPDC1-202ENST00000371601 ADAM17P78536 824 aa23.15■■□□□ 1.3
NPDC1-202ENST00000371601 TRIM71Q2Q1W2 868 aaKnown RBP23.15■■□□□ 1.3
NPDC1-202ENST00000371601 MCTP1Q6DN14 999 aa23.15■■□□□ 1.3
NPDC1-202ENST00000371601 POTEDQ86YR6 584 aa23.15■■□□□ 1.3
NPDC1-202ENST00000371601 TRAPPC12Q8WVT3 735 aa23.15■■□□□ 1.3
NPDC1-202ENST00000371601 ZBTB10Q96DT7 871 aa23.15■■□□□ 1.3
NPDC1-202ENST00000371601 LRCH3Q96II8 777 aa23.15■■□□□ 1.3
NPDC1-202ENST00000371601 H3BQV1 296 aa23.14■■□□□ 1.29
NPDC1-202ENST00000371601 ATP4AP20648 1035 aa23.14■■□□□ 1.29
NPDC1-202ENST00000371601 MARCH8Q5T0T0 291 aa23.14■■□□□ 1.29
NPDC1-202ENST00000371601 ATP8B4Q8TF62 1192 aa23.14■■□□□ 1.29
NPDC1-202ENST00000371601 KCNMB3Q9NPA1 279 aa23.14■■□□□ 1.29
NPDC1-202ENST00000371601 ZBBXA8MT70 800 aa23.13■■□□□ 1.29
NPDC1-202ENST00000371601 TBX3O15119 743 aa23.13■■□□□ 1.29
NPDC1-202ENST00000371601 CTSHP09668 335 aa23.13■■□□□ 1.29
NPDC1-202ENST00000371601 RUFY4Q6ZNE9 571 aa23.13■■□□□ 1.29
NPDC1-202ENST00000371601 HAS1Q92839 578 aa23.13■■□□□ 1.29
NPDC1-202ENST00000371601 MTIF3Q9H2K0 278 aaKnown RBP23.13■■□□□ 1.29
NPDC1-202ENST00000371601 NRBP2Q9NSY0 501 aa23.13■■□□□ 1.29
NPDC1-202ENST00000371601 SZT2Q5T011 3432 aa23.12■■□□□ 1.29
NPDC1-202ENST00000371601 PARNO95453 639 aaKnown RBP23.12■■□□□ 1.29
NPDC1-202ENST00000371601 PFKMP08237 780 aa23.12■■□□□ 1.29
NPDC1-202ENST00000371601 KLRC1P26715 233 aa23.12■■□□□ 1.29
NPDC1-202ENST00000371601 MCM7P33993 719 aa23.12■■□□□ 1.29
NPDC1-202ENST00000371601 RBL2Q08999 1139 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms